RNA–Protein interactions for RNA: ENST00000550657.1

UBE2N-205, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2 BASIC

Gene UBE2N, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-205ENST00000550657 KRT79Q5XKE5 535 aa10.25□□□□□ -0.77
UBE2N-205ENST00000550657 FAM114A1Q8IWE2 563 aa10.25□□□□□ -0.77
UBE2N-205ENST00000550657 ADGRF4Q8IZF3 695 aa10.25□□□□□ -0.77
UBE2N-205ENST00000550657 NOC3LQ8WTT2 800 aaKnown RBP10.25□□□□□ -0.77
UBE2N-205ENST00000550657 PNMA5Q96PV4 448 aa10.25□□□□□ -0.77
UBE2N-205ENST00000550657 MMS19Q96T76 1030 aa10.25□□□□□ -0.77
UBE2N-205ENST00000550657 CUEDC2Q9H467 287 aa10.25□□□□□ -0.77
UBE2N-205ENST00000550657 HAUS4Q9H6D7 363 aa10.25□□□□□ -0.77
UBE2N-205ENST00000550657 KANSL2Q9H9L4 492 aa10.25□□□□□ -0.77
UBE2N-205ENST00000550657 BLOC1S4Q9NUP1 217 aa10.25□□□□□ -0.77
UBE2N-205ENST00000550657 USP17L10C9JJH3 530 aa10.25□□□□□ -0.77
UBE2N-205ENST00000550657 TNNT3P45378 269 aaPredicted RBP10.25□□□□□ -0.77
UBE2N-205ENST00000550657 SNAP25P60880 206 aa10.25□□□□□ -0.77
UBE2N-205ENST00000550657 KRT83P78385 493 aa10.25□□□□□ -0.77
UBE2N-205ENST00000550657 MRPS25P82663 173 aaKnown RBP10.25□□□□□ -0.77
UBE2N-205ENST00000550657 ENOX2Q16206 610 aaKnown RBP10.25□□□□□ -0.77
UBE2N-205ENST00000550657 SHROOM1Q2M3G4 852 aaPredicted RBP10.25□□□□□ -0.77
UBE2N-205ENST00000550657 MIIPQ5JXC2 388 aa10.25□□□□□ -0.77
UBE2N-205ENST00000550657 ANKRD13CQ8N6S4 541 aa10.25□□□□□ -0.77
UBE2N-205ENST00000550657 DDX12PQ92771 950 aa10.25□□□□□ -0.77
UBE2N-205ENST00000550657 CCDC102AQ96A19 550 aa10.25□□□□□ -0.77
UBE2N-205ENST00000550657 KIAA1551Q9HCM1 1747 aa10.25□□□□□ -0.77
UBE2N-205ENST00000550657 ZNF831Q5JPB2 1677 aa10.24□□□□□ -0.77
UBE2N-205ENST00000550657 TNRC6CQ9HCJ0 1690 aaKnown RBP10.24□□□□□ -0.77
UBE2N-205ENST00000550657 KRT86O43790 486 aa10.24□□□□□ -0.77
UBE2N-205ENST00000550657 ERLIN1O75477 346 aa10.24□□□□□ -0.77
UBE2N-205ENST00000550657 ZBED6P86452 979 aa10.24□□□□□ -0.77
UBE2N-205ENST00000550657 BEND6Q5SZJ8 279 aaPredicted RBP10.24□□□□□ -0.77
UBE2N-205ENST00000550657 NELFCDQ8IXH7 590 aa10.24□□□□□ -0.77
UBE2N-205ENST00000550657 VPS18Q9P253 973 aa10.24□□□□□ -0.77
UBE2N-205ENST00000550657 ZNF219Q9P2Y4 722 aaPredicted RBP10.24□□□□□ -0.77
UBE2N-205ENST00000550657 SAR1BQ9Y6B6 198 aa10.24□□□□□ -0.77
UBE2N-205ENST00000550657 PPP1R11O60927 126 aaPredicted RBP10.24□□□□□ -0.77
UBE2N-205ENST00000550657 DNA2P51530 1060 aa10.24□□□□□ -0.77
UBE2N-205ENST00000550657 DDR1Q08345 913 aa10.24□□□□□ -0.77
UBE2N-205ENST00000550657 SPA17Q15506 151 aa10.24□□□□□ -0.77
UBE2N-205ENST00000550657 ECM1Q16610 540 aa10.24□□□□□ -0.77
UBE2N-205ENST00000550657 RRAGAQ7L523 313 aa10.24□□□□□ -0.77
UBE2N-205ENST00000550657 TBC1D22AQ8WUA7 517 aa10.24□□□□□ -0.77
UBE2N-205ENST00000550657 MTMR9Q96QG7 549 aa10.24□□□□□ -0.77
UBE2N-205ENST00000550657 ZC3H12CQ9C0D7 883 aaKnown RBP10.24□□□□□ -0.77
UBE2N-205ENST00000550657 RIOX1Q9H6W3 641 aa10.24□□□□□ -0.77
UBE2N-205ENST00000550657 JMJD4Q9H9V9 463 aa10.24□□□□□ -0.77
UBE2N-205ENST00000550657 MAGEF1Q9HAY2 307 aa10.24□□□□□ -0.77
UBE2N-205ENST00000550657 MYO1AQ9UBC5 1043 aa10.24□□□□□ -0.77
UBE2N-205ENST00000550657 DDX25Q9UHL0 483 aaKnown RBP10.24□□□□□ -0.77
UBE2N-205ENST00000550657 USP17L15C9J2P7 530 aa10.23□□□□□ -0.77
UBE2N-205ENST00000550657 USP17L13C9JLJ4 530 aa10.23□□□□□ -0.77
UBE2N-205ENST00000550657 USP17L11C9JVI0 530 aa10.23□□□□□ -0.77
UBE2N-205ENST00000550657 USP17L18D6R9N7 530 aa10.23□□□□□ -0.77
UBE2N-205ENST00000550657 USP17L22D6RA61 530 aa10.23□□□□□ -0.77
UBE2N-205ENST00000550657 USP17L17D6RBQ6 530 aa10.23□□□□□ -0.77
UBE2N-205ENST00000550657 USP17L19D6RCP7 530 aa10.23□□□□□ -0.77
UBE2N-205ENST00000550657 USP17L20D6RJB6 530 aa10.23□□□□□ -0.77
UBE2N-205ENST00000550657 ATP8B1O43520 1251 aa10.23□□□□□ -0.77
UBE2N-205ENST00000550657 BBOX1O75936 387 aa10.23□□□□□ -0.77
UBE2N-205ENST00000550657 MATR3P43243 847 aaKnown RBP eCLIP10.23□□□□□ -0.773e-7■□□□□ 8.1
UBE2N-205ENST00000550657 LMAN1P49257 510 aa10.23□□□□□ -0.77
UBE2N-205ENST00000550657 AMPD2Q01433 879 aa10.23□□□□□ -0.77
UBE2N-205ENST00000550657 USP17L24Q0WX57 530 aa10.23□□□□□ -0.77
UBE2N-205ENST00000550657 USP17L6PQ6QN14 398 aa10.23□□□□□ -0.77
UBE2N-205ENST00000550657 HDXQ7Z353 690 aa10.23□□□□□ -0.77
UBE2N-205ENST00000550657 ZSCAN29Q8IWY8 852 aaPredicted RBP10.23□□□□□ -0.77
UBE2N-205ENST00000550657 GSPT2Q8IYD1 628 aaKnown RBP10.23□□□□□ -0.77
UBE2N-205ENST00000550657 CERS5Q8N5B7 392 aa10.23□□□□□ -0.77
UBE2N-205ENST00000550657 NUP58Q9BVL2 599 aa10.23□□□□□ -0.77
UBE2N-205ENST00000550657 NDST4Q9H3R1 872 aa10.23□□□□□ -0.77
UBE2N-205ENST00000550657 MLXIPQ9HAP2 919 aa10.23□□□□□ -0.77
UBE2N-205ENST00000550657 SERPINB13Q9UIV8 391 aa10.23□□□□□ -0.77
UBE2N-205ENST00000550657 NPHP3-ACAD11A0A0J9YXS1 232 aa10.23□□□□□ -0.77
UBE2N-205ENST00000550657 PPEF1O14829 653 aaPredicted RBP10.23□□□□□ -0.77
UBE2N-205ENST00000550657 TTLL1O95922 423 aa10.23□□□□□ -0.77
UBE2N-205ENST00000550657 RBM5P52756 815 aaKnown RBP eCLIP10.23□□□□□ -0.77
UBE2N-205ENST00000550657 NAP1L1P55209 391 aaKnown RBP10.23□□□□□ -0.77
UBE2N-205ENST00000550657 KIF5AQ12840 1032 aa10.23□□□□□ -0.77
UBE2N-205ENST00000550657 NFIAQ12857 509 aa10.23□□□□□ -0.77
UBE2N-205ENST00000550657 CRY2Q49AN0 593 aa10.23□□□□□ -0.77
UBE2N-205ENST00000550657 VWA3BQ502W6 1294 aa10.23□□□□□ -0.77
UBE2N-205ENST00000550657 CRACR2AQ9BSW2 395 aa10.23□□□□□ -0.77
UBE2N-205ENST00000550657 RAB34Q9BZG1 259 aa10.23□□□□□ -0.77
UBE2N-205ENST00000550657 TTYH3Q9C0H2 523 aa10.23□□□□□ -0.77
UBE2N-205ENST00000550657 NLRC4Q9NPP4 1024 aa10.23□□□□□ -0.77
UBE2N-205ENST00000550657 PCDHAC2Q9Y5I4 1007 aa10.23□□□□□ -0.77
UBE2N-205ENST00000550657 POTEB2H3BUK9 544 aa10.23□□□□□ -0.77
UBE2N-205ENST00000550657 EDIL3O43854 480 aa10.23□□□□□ -0.77
UBE2N-205ENST00000550657 AKR1B10O60218 316 aa10.23□□□□□ -0.77
UBE2N-205ENST00000550657 TAL1P17542 331 aaPredicted RBP10.23□□□□□ -0.77
UBE2N-205ENST00000550657 CYP2C19P33261 490 aa10.23□□□□□ -0.77
UBE2N-205ENST00000550657 TUBB2AQ13885 445 aa10.23□□□□□ -0.77
UBE2N-205ENST00000550657 ASPRV1Q53RT3 343 aa10.23□□□□□ -0.77
UBE2N-205ENST00000550657 UNC13DQ70J99 1090 aa10.23□□□□□ -0.77
UBE2N-205ENST00000550657 TRAPPC11Q7Z392 1133 aa10.23□□□□□ -0.77
UBE2N-205ENST00000550657 ZFPM1Q8IX07 1006 aa10.23□□□□□ -0.77
UBE2N-205ENST00000550657 SEPT12Q8IYM1 358 aa10.23□□□□□ -0.77
UBE2N-205ENST00000550657 FNBP4Q8N3X1 1017 aaPredicted RBP10.23□□□□□ -0.77
UBE2N-205ENST00000550657 RAD54LQ92698 747 aa10.23□□□□□ -0.77
UBE2N-205ENST00000550657 TUBB2BQ9BVA1 445 aa10.23□□□□□ -0.77
UBE2N-205ENST00000550657 PSTPIP2Q9H939 334 aa10.23□□□□□ -0.77
UBE2N-205ENST00000550657 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.23□□□□□ -0.77
UBE2N-205ENST00000550657 E9PMD0 336 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms