RNA–Protein interactions for RNA: ENST00000550589.1

CCDC59-204, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-204ENST00000550589 ZNF831Q5JPB2 1677 aa4.93□□□□□ -1.62
CCDC59-204ENST00000550589 DOT1LQ8TEK3 1739 aa4.93□□□□□ -1.62
CCDC59-204ENST00000550589 CCDC194A0A1B0GVG4 234 aa4.93□□□□□ -1.62
CCDC59-204ENST00000550589 USP17L5A8MUK1 530 aa4.93□□□□□ -1.62
CCDC59-204ENST00000550589 ARHGAP6O43182 974 aa4.93□□□□□ -1.62
CCDC59-204ENST00000550589 ATP2B1P20020 1258 aa4.93□□□□□ -1.62
CCDC59-204ENST00000550589 SMARCA1P28370 1054 aa4.93□□□□□ -1.62
CCDC59-204ENST00000550589 HOXA7P31268 230 aaPredicted RBP4.93□□□□□ -1.62
CCDC59-204ENST00000550589 GUCY1A2P33402 732 aa4.93□□□□□ -1.62
CCDC59-204ENST00000550589 PLCD1P51178 756 aa4.93□□□□□ -1.62
CCDC59-204ENST00000550589 DYNLL1P63167 89 aaKnown RBP4.93□□□□□ -1.62
CCDC59-204ENST00000550589 TUBB4BP68371 445 aa4.93□□□□□ -1.62
CCDC59-204ENST00000550589 AMPD3Q01432 767 aa4.93□□□□□ -1.62
CCDC59-204ENST00000550589 POU4F2Q12837 409 aa4.93□□□□□ -1.62
CCDC59-204ENST00000550589 ORC2Q13416 577 aaPredicted RBP4.93□□□□□ -1.62
CCDC59-204ENST00000550589 TTC38Q5R3I4 469 aa4.93□□□□□ -1.62
CCDC59-204ENST00000550589 C12orf60Q5U649 245 aa4.93□□□□□ -1.62
CCDC59-204ENST00000550589 ADGRA1Q86SQ6 560 aa4.93□□□□□ -1.62
CCDC59-204ENST00000550589 RASSF8Q8NHQ8 419 aa4.93□□□□□ -1.62
CCDC59-204ENST00000550589 ANKS1AQ92625 1134 aa4.93□□□□□ -1.62
CCDC59-204ENST00000550589 CLIC6Q96NY7 704 aa4.93□□□□□ -1.62
CCDC59-204ENST00000550589 NAA15Q9BXJ9 866 aaKnown RBP4.93□□□□□ -1.62
CCDC59-204ENST00000550589 INCENPQ9NQS7 918 aa4.93□□□□□ -1.62
CCDC59-204ENST00000550589 VPS54Q9P1Q0 977 aa4.93□□□□□ -1.62
CCDC59-204ENST00000550589 SEC63Q9UGP8 760 aaKnown RBP4.93□□□□□ -1.62
CCDC59-204ENST00000550589 GGA1Q9UJY5 639 aa4.93□□□□□ -1.62
CCDC59-204ENST00000550589 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.93□□□□□ -1.62
CCDC59-204ENST00000550589 PCDHB6Q9Y5E3 794 aa4.93□□□□□ -1.62
CCDC59-204ENST00000550589 MYH7P12883 1935 aa4.92□□□□□ -1.62
CCDC59-204ENST00000550589 AKAP11Q9UKA4 1901 aa4.92□□□□□ -1.62
CCDC59-204ENST00000550589 CTIFO43310 598 aaKnown RBP4.92□□□□□ -1.62
CCDC59-204ENST00000550589 STX10O60499 249 aa4.92□□□□□ -1.62
CCDC59-204ENST00000550589 PRDM1O75626 825 aa4.92□□□□□ -1.62
CCDC59-204ENST00000550589 PRDX5P30044 214 aa4.92□□□□□ -1.62
CCDC59-204ENST00000550589 SARSP49591 514 aaKnown RBP4.92□□□□□ -1.62
CCDC59-204ENST00000550589 TOB1P50616 345 aaPredicted RBP4.92□□□□□ -1.62
CCDC59-204ENST00000550589 ATP2C1P98194 919 aaPredicted RBP4.92□□□□□ -1.62
CCDC59-204ENST00000550589 TFAP4Q01664 338 aa4.92□□□□□ -1.62
CCDC59-204ENST00000550589 LRMPQ12912 555 aa4.92□□□□□ -1.62
CCDC59-204ENST00000550589 NCAPHQ15003 741 aa4.92□□□□□ -1.62
CCDC59-204ENST00000550589 CCDC144BQ3MJ40 725 aa4.92□□□□□ -1.62
CCDC59-204ENST00000550589 SOGA3Q5TF21 947 aa4.92□□□□□ -1.62
CCDC59-204ENST00000550589 SPECC1LQ69YQ0 1117 aa4.92□□□□□ -1.62
CCDC59-204ENST00000550589 DTHD1Q6ZMT9 781 aa4.92□□□□□ -1.62
CCDC59-204ENST00000550589 PPFIBP1Q86W92 1011 aa4.92□□□□□ -1.62
CCDC59-204ENST00000550589 CCAR2Q8N163 923 aaKnown RBP4.92□□□□□ -1.62
CCDC59-204ENST00000550589 ERCC4Q92889 916 aaPredicted RBP4.92□□□□□ -1.62
CCDC59-204ENST00000550589 AK8Q96MA6 479 aa4.92□□□□□ -1.62
CCDC59-204ENST00000550589 FEZ1Q99689 392 aa4.92□□□□□ -1.62
CCDC59-204ENST00000550589 KRTAP4-5Q9BYR2 181 aa4.92□□□□□ -1.62
CCDC59-204ENST00000550589 RAB34Q9BZG1 259 aa4.92□□□□□ -1.62
CCDC59-204ENST00000550589 CSRNP2Q9H175 543 aa4.92□□□□□ -1.62
CCDC59-204ENST00000550589 CUEDC2Q9H467 287 aa4.92□□□□□ -1.62
CCDC59-204ENST00000550589 MAGEF1Q9HAY2 307 aa4.92□□□□□ -1.62
CCDC59-204ENST00000550589 TFCP2L1Q9NZI6 479 aa4.92□□□□□ -1.62
CCDC59-204ENST00000550589 CGNQ9P2M7 1197 aaKnown RBP4.92□□□□□ -1.62
CCDC59-204ENST00000550589 SERTAD1Q9UHV2 236 aa4.92□□□□□ -1.62
CCDC59-204ENST00000550589 PCDHA4Q9UN74 947 aa4.92□□□□□ -1.62
CCDC59-204ENST00000550589 PHLPP1O60346 1717 aa4.92□□□□□ -1.62
CCDC59-204ENST00000550589 TIAM2Q8IVF5 1701 aa4.92□□□□□ -1.62
CCDC59-204ENST00000550589 ARAP2Q8WZ64 1704 aa4.92□□□□□ -1.62
CCDC59-204ENST00000550589 LAMA4Q16363 1823 aa4.92□□□□□ -1.62
CCDC59-204ENST00000550589 RREB1Q92766 1687 aa4.91□□□□□ -1.62
CCDC59-204ENST00000550589 SPATA31C2B4DYI2 1134 aa4.91□□□□□ -1.62
CCDC59-204ENST00000550589 ATP9BO43861 1147 aa4.91□□□□□ -1.62
CCDC59-204ENST00000550589 UBA7P41226 1012 aa4.91□□□□□ -1.62
CCDC59-204ENST00000550589 RBM10P98175 930 aaKnown RBP4.91□□□□□ -1.62
CCDC59-204ENST00000550589 TRIM14Q14142 442 aa4.91□□□□□ -1.62
CCDC59-204ENST00000550589 MORC3Q14149 939 aa4.91□□□□□ -1.62
CCDC59-204ENST00000550589 PKN1Q16512 942 aa4.91□□□□□ -1.62
CCDC59-204ENST00000550589 SPATA1Q5VX52 437 aa4.91□□□□□ -1.62
CCDC59-204ENST00000550589 ISM2Q6H9L7 571 aa4.91□□□□□ -1.62
CCDC59-204ENST00000550589 METTL16Q86W50 562 aaKnown RBP4.91□□□□□ -1.62
CCDC59-204ENST00000550589 VSTM4Q8IW00 320 aa4.91□□□□□ -1.62
CCDC59-204ENST00000550589 BLIDQ8IZY5 108 aa4.91□□□□□ -1.62
CCDC59-204ENST00000550589 ZNF295-AS1Q8N0V1 137 aa4.91□□□□□ -1.62
CCDC59-204ENST00000550589 CMTR1Q8N1G2 835 aaKnown RBP4.91□□□□□ -1.62
CCDC59-204ENST00000550589 PDILTQ8N807 584 aa4.91□□□□□ -1.62
CCDC59-204ENST00000550589 SPATA20Q8TB22 786 aa4.91□□□□□ -1.62
CCDC59-204ENST00000550589 DHX58Q96C10 678 aa4.91□□□□□ -1.62
CCDC59-204ENST00000550589 LRRC27Q9C0I9 530 aa4.91□□□□□ -1.62
CCDC59-204ENST00000550589 C6orf50Q9HD87 102 aa4.91□□□□□ -1.62
CCDC59-204ENST00000550589 FANCLQ9NW38 375 aa4.91□□□□□ -1.62
CCDC59-204ENST00000550589 MAN1B1Q9UKM7 699 aa4.91□□□□□ -1.62
CCDC59-204ENST00000550589 TRPC5Q9UL62 973 aaPredicted RBP4.91□□□□□ -1.62
CCDC59-204ENST00000550589 STX8Q9UNK0 236 aa4.91□□□□□ -1.62
CCDC59-204ENST00000550589 KIAA1024Q9UPX6 916 aa4.91□□□□□ -1.62
CCDC59-204ENST00000550589 NFE2L3Q9Y4A8 694 aa4.91□□□□□ -1.62
CCDC59-204ENST00000550589 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.91□□□□□ -1.629e-7■■□□□ 13.7
CCDC59-204ENST00000550589 MROH7-TTC4A0A0A0MT08 1334 aa4.91□□□□□ -1.62
CCDC59-204ENST00000550589 VWA3AA6NCI4 1184 aa4.91□□□□□ -1.62
CCDC59-204ENST00000550589 USP17L3A6NCW0 530 aa4.91□□□□□ -1.62
CCDC59-204ENST00000550589 USP17L4A6NCW7 530 aa4.91□□□□□ -1.62
CCDC59-204ENST00000550589 DKK1O94907 266 aa4.91□□□□□ -1.62
CCDC59-204ENST00000550589 INHAP05111 366 aa4.91□□□□□ -1.62
CCDC59-204ENST00000550589 PARP1P09874 1014 aaKnown RBP4.91□□□□□ -1.62
CCDC59-204ENST00000550589 ALDH1B1P30837 517 aa4.91□□□□□ -1.62
CCDC59-204ENST00000550589 GDF10P55107 478 aa4.91□□□□□ -1.62
CCDC59-204ENST00000550589 CLDN10P78369 228 aa4.91□□□□□ -1.62
CCDC59-204ENST00000550589 CCZ1BP86790 482 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms