RNA–Protein interactions for RNA: ENST00000550513.1

PFDN5-210, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 939 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-210ENST00000550513 NT5C2P49902 561 aa12.72□□□□□ -0.37
PFDN5-210ENST00000550513 MRPL12P52815 198 aaKnown RBP12.72□□□□□ -0.37
PFDN5-210ENST00000550513 AAMPQ13685 434 aa12.72□□□□□ -0.37
PFDN5-210ENST00000550513 CDC37Q16543 378 aaPredicted RBP12.72□□□□□ -0.37
PFDN5-210ENST00000550513 FAM47CQ5HY64 1035 aa12.72□□□□□ -0.37
PFDN5-210ENST00000550513 IQCA1Q86XH1 822 aa12.72□□□□□ -0.37
PFDN5-210ENST00000550513 SMC5Q8IY18 1101 aa12.72□□□□□ -0.37
PFDN5-210ENST00000550513 RPUSD2Q8IZ73 545 aaKnown RBP12.72□□□□□ -0.37
PFDN5-210ENST00000550513 PNMA1Q8ND90 353 aa12.72□□□□□ -0.37
PFDN5-210ENST00000550513 NKX2-4Q9H2Z4 354 aa12.72□□□□□ -0.37
PFDN5-210ENST00000550513 SLC28A3Q9HAS3 691 aa12.72□□□□□ -0.37
PFDN5-210ENST00000550513 NLRC5Q86WI3 1866 aa12.72□□□□□ -0.37
PFDN5-210ENST00000550513 ABCB11O95342 1321 aa12.71□□□□□ -0.37
PFDN5-210ENST00000550513 KDM4AO75164 1064 aa12.71□□□□□ -0.37
PFDN5-210ENST00000550513 CYP2C9P11712 490 aa12.71□□□□□ -0.37
PFDN5-210ENST00000550513 TJAP1Q5JTD0 557 aa12.71□□□□□ -0.37
PFDN5-210ENST00000550513 PPP2R2DQ66LE6 453 aa12.71□□□□□ -0.37
PFDN5-210ENST00000550513 CWC27Q6UX04 472 aaKnown RBP12.71□□□□□ -0.37
PFDN5-210ENST00000550513 CHD1LQ86WJ1 897 aa12.71□□□□□ -0.37
PFDN5-210ENST00000550513 DGKHQ86XP1 1220 aa12.71□□□□□ -0.37
PFDN5-210ENST00000550513 PPM1EQ8WY54 764 aa12.71□□□□□ -0.37
PFDN5-210ENST00000550513 CPVLQ9H3G5 476 aa12.71□□□□□ -0.37
PFDN5-210ENST00000550513 KAT14Q9H8E8 782 aa12.71□□□□□ -0.37
PFDN5-210ENST00000550513 DIAPH3Q9NSV4 1193 aa12.71□□□□□ -0.37
PFDN5-210ENST00000550513 YBX2Q9Y2T7 364 aaKnown RBP12.71□□□□□ -0.37
PFDN5-210ENST00000550513 SLC4A7Q9Y6M7 1214 aa12.71□□□□□ -0.37
PFDN5-210ENST00000550513 TRANK1O15050 2925 aa12.7□□□□□ -0.38
PFDN5-210ENST00000550513 TXNP10599 105 aaKnown RBP12.7□□□□□ -0.38
PFDN5-210ENST00000550513 RABGGTBP53611 331 aa12.7□□□□□ -0.38
PFDN5-210ENST00000550513 TTLL4Q14679 1199 aa12.7□□□□□ -0.38
PFDN5-210ENST00000550513 NBPF20Q3BBV1 942 aa12.7□□□□□ -0.38
PFDN5-210ENST00000550513 ASPRV1Q53RT3 343 aa12.7□□□□□ -0.38
PFDN5-210ENST00000550513 CCDC178Q5BJE1 867 aa12.7□□□□□ -0.38
PFDN5-210ENST00000550513 NFRKBQ6P4R8 1299 aa12.7□□□□□ -0.38
PFDN5-210ENST00000550513 DEFB128Q7Z7B8 93 aa12.7□□□□□ -0.38
PFDN5-210ENST00000550513 PLEKHM2Q8IWE5 1019 aa12.7□□□□□ -0.38
PFDN5-210ENST00000550513 COPS5Q92905 334 aa12.7□□□□□ -0.38
PFDN5-210ENST00000550513 RWDD1Q9H446 243 aaPredicted RBP12.7□□□□□ -0.38
PFDN5-210ENST00000550513 OSBPL3Q9H4L5 887 aa12.7□□□□□ -0.38
PFDN5-210ENST00000550513 THEGQ9P2T0 379 aa12.7□□□□□ -0.38
PFDN5-210ENST00000550513 BAZ2BQ9UIF8 2168 aaKnown RBP12.69□□□□□ -0.38
PFDN5-210ENST00000550513 A6NJR5 290 aa12.69□□□□□ -0.38
PFDN5-210ENST00000550513 B4E1Z4 1266 aa12.69□□□□□ -0.38
PFDN5-210ENST00000550513 HIP1O00291 1037 aa12.69□□□□□ -0.38
PFDN5-210ENST00000550513 PITPNM1O00562 1244 aa12.69□□□□□ -0.38
PFDN5-210ENST00000550513 DHX16O60231 1041 aaKnown RBP12.69□□□□□ -0.38
PFDN5-210ENST00000550513 KPNA6O60684 536 aa12.69□□□□□ -0.38
PFDN5-210ENST00000550513 ARIH2O95376 493 aa12.69□□□□□ -0.38
PFDN5-210ENST00000550513 ACTN1P12814 892 aa12.69□□□□□ -0.38
PFDN5-210ENST00000550513 ATP2A2P16615 1042 aaKnown RBP12.69□□□□□ -0.38
PFDN5-210ENST00000550513 IGFBP4P22692 258 aa12.69□□□□□ -0.38
PFDN5-210ENST00000550513 RFC2P35250 354 aa12.69□□□□□ -0.38
PFDN5-210ENST00000550513 IMMTQ16891 758 aaKnown RBP12.69□□□□□ -0.38
PFDN5-210ENST00000550513 PPP1R13LQ8WUF5 828 aa12.69□□□□□ -0.38
PFDN5-210ENST00000550513 UBA5Q9GZZ9 404 aa12.69□□□□□ -0.38
PFDN5-210ENST00000550513 MAF1Q9H063 256 aa12.69□□□□□ -0.38
PFDN5-210ENST00000550513 PRDM6Q9NQX0 595 aa12.69□□□□□ -0.38
PFDN5-210ENST00000550513 PCDHA11Q9Y5I1 949 aa12.69□□□□□ -0.38
PFDN5-210ENST00000550513 KAT6AQ92794 2004 aa12.69□□□□□ -0.38
PFDN5-210ENST00000550513 XIRP2A4UGR9 3374 aa12.68□□□□□ -0.38
PFDN5-210ENST00000550513 MMP3P08254 477 aa12.68□□□□□ -0.38
PFDN5-210ENST00000550513 NUCB1Q02818 461 aa12.68□□□□□ -0.38
PFDN5-210ENST00000550513 PTPN11Q06124 597 aaPredicted RBP12.68□□□□□ -0.38
PFDN5-210ENST00000550513 ADGRE1Q14246 886 aa12.68□□□□□ -0.38
PFDN5-210ENST00000550513 QRICH1Q2TAL8 776 aa12.68□□□□□ -0.38
PFDN5-210ENST00000550513 ADGRF4Q8IZF3 695 aa12.68□□□□□ -0.38
PFDN5-210ENST00000550513 ENAHQ8N8S7 591 aaPredicted RBP12.68□□□□□ -0.38
PFDN5-210ENST00000550513 RGS22Q8NE09 1264 aa12.68□□□□□ -0.38
PFDN5-210ENST00000550513 VWCEQ96DN2 955 aa12.68□□□□□ -0.38
PFDN5-210ENST00000550513 ZSCAN10Q96SZ4 725 aaPredicted RBP12.68□□□□□ -0.38
PFDN5-210ENST00000550513 DSCC1Q9BVC3 393 aa12.68□□□□□ -0.38
PFDN5-210ENST00000550513 NOD1Q9Y239 953 aa12.68□□□□□ -0.38
PFDN5-210ENST00000550513 RALGAPA2Q2PPJ7 1873 aa12.68□□□□□ -0.38
PFDN5-210ENST00000550513 GH1P01241 217 aa12.67□□□□□ -0.38
PFDN5-210ENST00000550513 PARP1P09874 1014 aaKnown RBP12.67□□□□□ -0.38
PFDN5-210ENST00000550513 MYOGP15173 224 aa12.67□□□□□ -0.38
PFDN5-210ENST00000550513 CHMP4BP1P59074 171 aa12.67□□□□□ -0.38
PFDN5-210ENST00000550513 BFSP2Q13515 415 aa12.67□□□□□ -0.38
PFDN5-210ENST00000550513 CCDC85BQ15834 202 aaPredicted RBP12.67□□□□□ -0.38
PFDN5-210ENST00000550513 SEPT14Q6ZU15 432 aa12.67□□□□□ -0.38
PFDN5-210ENST00000550513 FBXO11Q86XK2 927 aa12.67□□□□□ -0.38
PFDN5-210ENST00000550513 MCF2L2Q86YR7 1114 aa12.67□□□□□ -0.38
PFDN5-210ENST00000550513 CCDC155Q8N6L0 562 aa12.67□□□□□ -0.38
PFDN5-210ENST00000550513 RETREG2Q8NC44 543 aa12.67□□□□□ -0.38
PFDN5-210ENST00000550513 SYTL5Q8TDW5 730 aaPredicted RBP12.67□□□□□ -0.38
PFDN5-210ENST00000550513 NSUN6Q8TEA1 469 aaKnown RBP12.67□□□□□ -0.38
PFDN5-210ENST00000550513 ATXN2LQ8WWM7 1075 aaKnown RBP12.67□□□□□ -0.38
PFDN5-210ENST00000550513 SLC9A7Q96T83 725 aa12.67□□□□□ -0.38
PFDN5-210ENST00000550513 UBAC1Q9BSL1 405 aa12.67□□□□□ -0.38
PFDN5-210ENST00000550513 KRT23Q9C075 422 aa12.67□□□□□ -0.38
PFDN5-210ENST00000550513 COL20A1Q9P218 1284 aa12.67□□□□□ -0.38
PFDN5-210ENST00000550513 ATG2AQ2TAZ0 1938 aa12.66□□□□□ -0.38
PFDN5-210ENST00000550513 IGHDP01880 384 aa12.66□□□□□ -0.38
PFDN5-210ENST00000550513 CA3P07451 260 aa12.66□□□□□ -0.38
PFDN5-210ENST00000550513 IQCF3P0C7M6 154 aa12.66□□□□□ -0.38
PFDN5-210ENST00000550513 ARHGAP1Q07960 439 aa12.66□□□□□ -0.38
PFDN5-210ENST00000550513 STXBP2Q15833 593 aa12.66□□□□□ -0.38
PFDN5-210ENST00000550513 LY6KQ17RY6 165 aa12.66□□□□□ -0.38
PFDN5-210ENST00000550513 IFIT1BQ5T764 474 aaKnown RBP12.66□□□□□ -0.38
PFDN5-210ENST00000550513 CCDC62Q6P9F0 684 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms