RNA–Protein interactions for RNA: ENST00000550504.5

RAB5C-207, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-207ENST00000550504 PLEKHH3Q7Z736 793 aa11.73□□□□□ -0.53
RAB5C-207ENST00000550504 NEK8Q86SG6 692 aa11.73□□□□□ -0.53
RAB5C-207ENST00000550504 TEX2Q8IWB9 1127 aa11.73□□□□□ -0.53
RAB5C-207ENST00000550504 ZFP91Q96JP5 570 aaPredicted RBP11.73□□□□□ -0.53
RAB5C-207ENST00000550504 ZNF396Q96N95 335 aaPredicted RBP11.73□□□□□ -0.53
RAB5C-207ENST00000550504 RMDN3Q96TC7 470 aa11.73□□□□□ -0.53
RAB5C-207ENST00000550504 EHMT1Q9H9B1 1298 aa11.73□□□□□ -0.53
RAB5C-207ENST00000550504 WBP1LQ9NX94 342 aa11.73□□□□□ -0.53
RAB5C-207ENST00000550504 MYH15Q9Y2K3 1946 aa11.73□□□□□ -0.53
RAB5C-207ENST00000550504 TNPO2O14787 897 aaKnown RBP11.72□□□□□ -0.53
RAB5C-207ENST00000550504 PTPREP23469 700 aa11.72□□□□□ -0.53
RAB5C-207ENST00000550504 ADORA2AP29274 412 aa11.72□□□□□ -0.53
RAB5C-207ENST00000550504 SREBF1P36956 1147 aa11.72□□□□□ -0.53
RAB5C-207ENST00000550504 ARHGAP4P98171 946 aa11.72□□□□□ -0.53
RAB5C-207ENST00000550504 MAP2K1Q02750 393 aaPredicted RBP11.72□□□□□ -0.53
RAB5C-207ENST00000550504 ZNF174Q15697 407 aa11.72□□□□□ -0.53
RAB5C-207ENST00000550504 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.72□□□□□ -0.53
RAB5C-207ENST00000550504 USP28Q96RU2 1077 aa11.72□□□□□ -0.53
RAB5C-207ENST00000550504 BEGAINQ9BUH8 593 aa11.72□□□□□ -0.53
RAB5C-207ENST00000550504 ARHGAP39Q9C0H5 1083 aa11.72□□□□□ -0.53
RAB5C-207ENST00000550504 MAF1Q9H063 256 aa11.72□□□□□ -0.53
RAB5C-207ENST00000550504 PXMP2Q9NR77 195 aa11.72□□□□□ -0.53
RAB5C-207ENST00000550504 TSKSQ9UJT2 592 aa11.72□□□□□ -0.53
RAB5C-207ENST00000550504 CNPY2Q9Y2B0 182 aa11.72□□□□□ -0.53
RAB5C-207ENST00000550504 PCDHB6Q9Y5E3 794 aa11.72□□□□□ -0.53
RAB5C-207ENST00000550504 CLIC4Q9Y696 253 aa11.72□□□□□ -0.53
RAB5C-207ENST00000550504 DDX49Q9Y6V7 483 aaKnown RBP11.72□□□□□ -0.53
RAB5C-207ENST00000550504 RPTORQ8N122 1335 aa11.71□□□□□ -0.53
RAB5C-207ENST00000550504 MYH7BA7E2Y1 1941 aa11.71□□□□□ -0.53
RAB5C-207ENST00000550504 LCTP09848 1927 aa11.71□□□□□ -0.53
RAB5C-207ENST00000550504 SOWAHBA6NEL2 793 aa11.71□□□□□ -0.53
RAB5C-207ENST00000550504 FIBPO43427 364 aa11.71□□□□□ -0.53
RAB5C-207ENST00000550504 STRNO43815 780 aa11.71□□□□□ -0.53
RAB5C-207ENST00000550504 EDIL3O43854 480 aa11.71□□□□□ -0.53
RAB5C-207ENST00000550504 CCNT1O60563 726 aaKnown RBP11.71□□□□□ -0.53
RAB5C-207ENST00000550504 TDP2O95551 362 aa11.71□□□□□ -0.53
RAB5C-207ENST00000550504 MYCLP12524 364 aaPredicted RBP11.71□□□□□ -0.53
RAB5C-207ENST00000550504 CTGFP29279 349 aa11.71□□□□□ -0.53
RAB5C-207ENST00000550504 MCM7P33993 719 aa11.71□□□□□ -0.53
RAB5C-207ENST00000550504 ZNF76P36508 570 aa11.71□□□□□ -0.53
RAB5C-207ENST00000550504 TRAPPC10P48553 1259 aa11.71□□□□□ -0.53
RAB5C-207ENST00000550504 KRT85P78386 507 aa11.71□□□□□ -0.53
RAB5C-207ENST00000550504 SP3Q02447 781 aa11.71□□□□□ -0.53
RAB5C-207ENST00000550504 PGM5Q15124 567 aa11.71□□□□□ -0.53
RAB5C-207ENST00000550504 SF3A1Q15459 793 aaKnown RBP11.71□□□□□ -0.53
RAB5C-207ENST00000550504 DPP9Q86TI2 863 aa11.71□□□□□ -0.53
RAB5C-207ENST00000550504 FAM133AQ8N9E0 248 aa11.71□□□□□ -0.53
RAB5C-207ENST00000550504 IL31RAQ8NI17 732 aa11.71□□□□□ -0.53
RAB5C-207ENST00000550504 NSUN6Q8TEA1 469 aaKnown RBP11.71□□□□□ -0.53
RAB5C-207ENST00000550504 CFHR5Q9BXR6 569 aa11.71□□□□□ -0.53
RAB5C-207ENST00000550504 GDPD2Q9HCC8 539 aa11.71□□□□□ -0.53
RAB5C-207ENST00000550504 ZSWIM8A7E2V4 1837 aa11.71□□□□□ -0.54
RAB5C-207ENST00000550504 ASTN1O14525 1302 aa11.7□□□□□ -0.54
RAB5C-207ENST00000550504 DNAJC25-GNG10A0A024R161 153 aa11.7□□□□□ -0.54
RAB5C-207ENST00000550504 SLC15A5A6NIM6 579 aa11.7□□□□□ -0.54
RAB5C-207ENST00000550504 GPR25O00155 361 aa11.7□□□□□ -0.54
RAB5C-207ENST00000550504 COBLO75128 1261 aa11.7□□□□□ -0.54
RAB5C-207ENST00000550504 BAG4O95429 457 aaKnown RBP11.7□□□□□ -0.54
RAB5C-207ENST00000550504 PSMC4P43686 418 aa11.7□□□□□ -0.54
RAB5C-207ENST00000550504 FCGRTP55899 365 aa11.7□□□□□ -0.54
RAB5C-207ENST00000550504 LACTBP83111 547 aaPredicted RBP11.7□□□□□ -0.54
RAB5C-207ENST00000550504 GRB14Q14449 540 aa11.7□□□□□ -0.54
RAB5C-207ENST00000550504 ANO1Q5XXA6 986 aa11.7□□□□□ -0.54
RAB5C-207ENST00000550504 ABRAQ8N0Z2 381 aa11.7□□□□□ -0.54
RAB5C-207ENST00000550504 CD99L2Q8TCZ2 262 aa11.7□□□□□ -0.54
RAB5C-207ENST00000550504 CRYGNQ8WXF5 182 aa11.7□□□□□ -0.54
RAB5C-207ENST00000550504 PDCD2LQ9BRP1 358 aa11.7□□□□□ -0.54
RAB5C-207ENST00000550504 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.7□□□□□ -0.54
RAB5C-207ENST00000550504 SAGE1Q9NXZ1 904 aa11.7□□□□□ -0.54
RAB5C-207ENST00000550504 RTEL1Q9NZ71 1219 aa11.7□□□□□ -0.54
RAB5C-207ENST00000550504 CFAP45Q9UL16 551 aa11.7□□□□□ -0.54
RAB5C-207ENST00000550504 ZNFX1Q9P2E3 1918 aaKnown RBP11.7□□□□□ -0.54
RAB5C-207ENST00000550504 FRMPD4Q14CM0 1322 aa11.69□□□□□ -0.54
RAB5C-207ENST00000550504 NR3C2P08235 984 aa11.69□□□□□ -0.54
RAB5C-207ENST00000550504 CYP3A4P08684 503 aa11.69□□□□□ -0.54
RAB5C-207ENST00000550504 CCND2P30279 289 aa11.69□□□□□ -0.54
RAB5C-207ENST00000550504 CTCFP49711 727 aaPredicted RBP11.69□□□□□ -0.54
RAB5C-207ENST00000550504 ALDH5A1P51649 535 aaPredicted RBP11.69□□□□□ -0.54
RAB5C-207ENST00000550504 USP11P51784 963 aa11.69□□□□□ -0.54
RAB5C-207ENST00000550504 KIF22Q14807 665 aa11.69□□□□□ -0.54
RAB5C-207ENST00000550504 STK38Q15208 465 aa11.69□□□□□ -0.54
RAB5C-207ENST00000550504 TPRNQ4KMQ1 711 aa11.69□□□□□ -0.54
RAB5C-207ENST00000550504 MORN1Q5T089 497 aa11.69□□□□□ -0.54
RAB5C-207ENST00000550504 PCNX4Q63HM2 1172 aa11.69□□□□□ -0.54
RAB5C-207ENST00000550504 ATL3Q6DD88 541 aa11.69□□□□□ -0.54
RAB5C-207ENST00000550504 DNERQ8NFT8 737 aa11.69□□□□□ -0.54
RAB5C-207ENST00000550504 TRIM47Q96LD4 638 aa11.69□□□□□ -0.54
RAB5C-207ENST00000550504 FGD4Q96M96 766 aa11.69□□□□□ -0.54
RAB5C-207ENST00000550504 GBP4Q96PP9 640 aa11.69□□□□□ -0.54
RAB5C-207ENST00000550504 UIMC1Q96RL1 719 aa11.69□□□□□ -0.54
RAB5C-207ENST00000550504 ADD3Q9UEY8 706 aaKnown RBP11.69□□□□□ -0.54
RAB5C-207ENST00000550504 DDX25Q9UHL0 483 aaKnown RBP11.69□□□□□ -0.54
RAB5C-207ENST00000550504 MRVI1Q9Y6F6 885 aa11.69□□□□□ -0.54
RAB5C-207ENST00000550504 MGAMO43451 1857 aa11.68□□□□□ -0.54
RAB5C-207ENST00000550504 FAM86B1E9PN63 330 aa11.68□□□□□ -0.54
RAB5C-207ENST00000550504 SLC37A4O43826 429 aa11.68□□□□□ -0.54
RAB5C-207ENST00000550504 FKTNO75072 461 aa11.68□□□□□ -0.54
RAB5C-207ENST00000550504 FAM86B2P0C5J1 330 aa11.68□□□□□ -0.54
RAB5C-207ENST00000550504 HSPA8P11142 646 aaKnown RBP11.68□□□□□ -0.54
RAB5C-207ENST00000550504 CYP2B6P20813 491 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms