RNA–Protein interactions for RNA: ENST00000550444.1

HCFC2-205, Transcript of host cell factor C2, humanhuman

TSL 4

Gene HCFC2, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-205ENST00000550444 GBF1Q92538 1859 aa20.16■□□□□ 0.82
HCFC2-205ENST00000550444 EPOPA6NHQ4 379 aa20.16■□□□□ 0.82
HCFC2-205ENST00000550444 A6NJR5 290 aa20.16■□□□□ 0.82
HCFC2-205ENST00000550444 KIF28PB7ZC32 967 aa20.16■□□□□ 0.82
HCFC2-205ENST00000550444 USH1GQ495M9 461 aa20.16■□□□□ 0.82
HCFC2-205ENST00000550444 KRT40Q6A162 431 aa20.16■□□□□ 0.82
HCFC2-205ENST00000550444 PNMA2Q9UL42 364 aa20.16■□□□□ 0.82
HCFC2-205ENST00000550444 B4DLN1 442 aa20.15■□□□□ 0.82
HCFC2-205ENST00000550444 MRPL12P52815 198 aaKnown RBP20.15■□□□□ 0.82
HCFC2-205ENST00000550444 ZNF543Q08ER8 600 aa20.15■□□□□ 0.82
HCFC2-205ENST00000550444 BFSP2Q13515 415 aa20.15■□□□□ 0.82
HCFC2-205ENST00000550444 MCMDC2Q4G0Z9 681 aa20.15■□□□□ 0.82
HCFC2-205ENST00000550444 HERC6Q8IVU3 1022 aa20.15■□□□□ 0.82
HCFC2-205ENST00000550444 DNERQ8NFT8 737 aa20.15■□□□□ 0.82
HCFC2-205ENST00000550444 PHOSPHO2Q8TCD6 241 aa20.15■□□□□ 0.82
HCFC2-205ENST00000550444 LCTP09848 1927 aa20.14■□□□□ 0.81
HCFC2-205ENST00000550444 SALL3Q9BXA9 1300 aa20.14■□□□□ 0.81
HCFC2-205ENST00000550444 A0A0D9SFI3 127 aa20.14■□□□□ 0.81
HCFC2-205ENST00000550444 PITPNM1O00562 1244 aa20.14■□□□□ 0.81
HCFC2-205ENST00000550444 ARHGEF15O94989 841 aa20.14■□□□□ 0.81
HCFC2-205ENST00000550444 GOLGA8HP0CJ92 632 aa20.14■□□□□ 0.81
HCFC2-205ENST00000550444 HSPD1P10809 573 aaKnown RBP20.14■□□□□ 0.81
HCFC2-205ENST00000550444 EDNRBP24530 442 aa20.14■□□□□ 0.81
HCFC2-205ENST00000550444 TAP1Q03518 808 aa20.14■□□□□ 0.81
HCFC2-205ENST00000550444 PTPN11Q06124 597 aaPredicted RBP20.14■□□□□ 0.81
HCFC2-205ENST00000550444 PTGISQ16647 500 aa20.14■□□□□ 0.81
HCFC2-205ENST00000550444 UBA5Q9GZZ9 404 aa20.14■□□□□ 0.81
HCFC2-205ENST00000550444 CHD9Q3L8U1 2897 aa20.14■□□□□ 0.81
HCFC2-205ENST00000550444 WDR19Q8NEZ3 1342 aa20.13■□□□□ 0.81
HCFC2-205ENST00000550444 ARIH2O95376 493 aa20.13■□□□□ 0.81
HCFC2-205ENST00000550444 KCNJ6P48051 423 aa20.13■□□□□ 0.81
HCFC2-205ENST00000550444 MFSD6Q6ZSS7 791 aa20.13■□□□□ 0.81
HCFC2-205ENST00000550444 SEPT14Q6ZU15 432 aa20.13■□□□□ 0.81
HCFC2-205ENST00000550444 CHST3Q7LGC8 479 aa20.13■□□□□ 0.81
HCFC2-205ENST00000550444 AFG1LQ8WV93 481 aa20.13■□□□□ 0.81
HCFC2-205ENST00000550444 TTC14Q96N46 770 aa20.13■□□□□ 0.81
HCFC2-205ENST00000550444 CPVLQ9H3G5 476 aa20.13■□□□□ 0.81
HCFC2-205ENST00000550444 TLL1O43897 1013 aa20.12■□□□□ 0.81
HCFC2-205ENST00000550444 POU3F3P20264 500 aaPredicted RBP20.12■□□□□ 0.81
HCFC2-205ENST00000550444 PDE1AP54750 535 aa20.12■□□□□ 0.81
HCFC2-205ENST00000550444 NMIQ13287 307 aaPredicted RBP20.12■□□□□ 0.81
HCFC2-205ENST00000550444 LY6KQ17RY6 165 aa20.12■□□□□ 0.81
HCFC2-205ENST00000550444 ZNF589Q86UQ0 364 aaPredicted RBP20.12■□□□□ 0.81
HCFC2-205ENST00000550444 ZKSCAN3Q9BRR0 538 aa20.12■□□□□ 0.81
HCFC2-205ENST00000550444 SPRED2Q7Z698 418 aa20.11■□□□□ 0.81
HCFC2-205ENST00000550444 CCDC155Q8N6L0 562 aa20.11■□□□□ 0.81
HCFC2-205ENST00000550444 TBC1D5Q92609 795 aa20.11■□□□□ 0.81
HCFC2-205ENST00000550444 TAAR1Q96RJ0 339 aa20.11■□□□□ 0.81
HCFC2-205ENST00000550444 ZBED2Q9BTP6 218 aa20.11■□□□□ 0.81
HCFC2-205ENST00000550444 SCN5AQ14524 2016 aa20.1■□□□□ 0.81
HCFC2-205ENST00000550444 TCF20Q9UGU0 1960 aaKnown RBP20.1■□□□□ 0.81
HCFC2-205ENST00000550444 TRIM6-TRIM34B2RNG4 842 aa20.1■□□□□ 0.81
HCFC2-205ENST00000550444 GH1P01241 217 aa20.1■□□□□ 0.81
HCFC2-205ENST00000550444 SNHG28P0DPA3 235 aa20.1■□□□□ 0.81
HCFC2-205ENST00000550444 GRB10Q13322 594 aa20.1■□□□□ 0.81
HCFC2-205ENST00000550444 GPATCH4Q5T3I0 446 aaKnown RBP20.1■□□□□ 0.81
HCFC2-205ENST00000550444 GDF6Q6KF10 455 aaPredicted RBP20.1■□□□□ 0.81
HCFC2-205ENST00000550444 CCDC62Q6P9F0 684 aa20.1■□□□□ 0.81
HCFC2-205ENST00000550444 TMCO2Q7Z6W1 182 aaPredicted RBP20.1■□□□□ 0.81
HCFC2-205ENST00000550444 TBC1D10CQ8IV04 446 aa20.1■□□□□ 0.81
HCFC2-205ENST00000550444 RGS22Q8NE09 1264 aa20.1■□□□□ 0.81
HCFC2-205ENST00000550444 C1QTNF1Q9BXJ1 281 aa20.1■□□□□ 0.81
HCFC2-205ENST00000550444 COG5Q9UP83 839 aa20.1■□□□□ 0.81
HCFC2-205ENST00000550444 BAIAP3O94812 1187 aa20.09■□□□□ 0.81
HCFC2-205ENST00000550444 MMP3P08254 477 aa20.09■□□□□ 0.81
HCFC2-205ENST00000550444 CAGE1Q8TC20 777 aa20.09■□□□□ 0.81
HCFC2-205ENST00000550444 AFAP1L1Q8TED9 768 aa20.09■□□□□ 0.81
HCFC2-205ENST00000550444 RILPL2Q969X0 211 aa20.09■□□□□ 0.81
HCFC2-205ENST00000550444 CHD7Q9P2D1 2997 aa20.09■□□□□ 0.81
HCFC2-205ENST00000550444 CCDC171Q6TFL3 1326 aa20.08■□□□□ 0.81
HCFC2-205ENST00000550444 LCHNA4D1U4 455 aa20.08■□□□□ 0.81
HCFC2-205ENST00000550444 SELPP16109 830 aa20.08■□□□□ 0.81
HCFC2-205ENST00000550444 CASTP20810 708 aaKnown RBP20.08■□□□□ 0.81
HCFC2-205ENST00000550444 WDR5P61964 334 aaKnown RBP20.08■□□□□ 0.81
HCFC2-205ENST00000550444 CDC37Q16543 378 aaPredicted RBP20.08■□□□□ 0.81
HCFC2-205ENST00000550444 LRRC8DQ7L1W4 858 aa20.08■□□□□ 0.81
HCFC2-205ENST00000550444 SYTL5Q8TDW5 730 aaPredicted RBP20.08■□□□□ 0.81
HCFC2-205ENST00000550444 NSUN6Q8TEA1 469 aaKnown RBP20.08■□□□□ 0.81
HCFC2-205ENST00000550444 ESR2Q92731 530 aa20.08■□□□□ 0.81
HCFC2-205ENST00000550444 HLA-CQ95604 372 aa20.08■□□□□ 0.81
HCFC2-205ENST00000550444 FAM122AQ96E09 287 aa20.08■□□□□ 0.81
HCFC2-205ENST00000550444 RNF41Q9H4P4 317 aaPredicted RBP20.08■□□□□ 0.81
HCFC2-205ENST00000550444 PRRC2BQ5JSZ5 2229 aaKnown RBP20.07■□□□□ 0.8
HCFC2-205ENST00000550444 SCN10AQ9Y5Y9 1956 aa20.07■□□□□ 0.8
HCFC2-205ENST00000550444 DHX16O60231 1041 aaKnown RBP20.07■□□□□ 0.8
HCFC2-205ENST00000550444 PCP11498 1178 aaKnown RBP20.07■□□□□ 0.8
HCFC2-205ENST00000550444 ARHGAP1Q07960 439 aa20.07■□□□□ 0.8
HCFC2-205ENST00000550444 GPNMBQ14956 572 aa20.07■□□□□ 0.8
HCFC2-205ENST00000550444 STXBP2Q15833 593 aa20.07■□□□□ 0.8
HCFC2-205ENST00000550444 ADGRF4Q8IZF3 695 aa20.07■□□□□ 0.8
HCFC2-205ENST00000550444 C7orf31Q8N865 590 aa20.07■□□□□ 0.8
HCFC2-205ENST00000550444 KAT2BQ92831 832 aa20.07■□□□□ 0.8
HCFC2-205ENST00000550444 CTAGE1Q96RT6 745 aa20.07■□□□□ 0.8
HCFC2-205ENST00000550444 RMDN3Q96TC7 470 aa20.07■□□□□ 0.8
HCFC2-205ENST00000550444 ALG1Q9BT22 464 aa20.07■□□□□ 0.8
HCFC2-205ENST00000550444 EPHX3Q9H6B9 360 aa20.07■□□□□ 0.8
HCFC2-205ENST00000550444 VAT1LQ9HCJ6 419 aa20.07■□□□□ 0.8
HCFC2-205ENST00000550444 COL20A1Q9P218 1284 aa20.07■□□□□ 0.8
HCFC2-205ENST00000550444 MTUS1Q9ULD2 1270 aa20.07■□□□□ 0.8
HCFC2-205ENST00000550444 ABCB11O95342 1321 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms