RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 PCDHA6Q9UN73 950 aa14.97□□□□□ -0.01
RAB5C-206ENST00000550406 PCDHA4Q9UN74 947 aa14.97□□□□□ -0.01
RAB5C-206ENST00000550406 PCDHA8Q9Y5H6 950 aa14.97□□□□□ -0.01
RAB5C-206ENST00000550406 FRMPD4Q14CM0 1322 aa14.96□□□□□ -0.01
RAB5C-206ENST00000550406 EDIL3O43854 480 aa14.96□□□□□ -0.01
RAB5C-206ENST00000550406 EDNRBP24530 442 aa14.96□□□□□ -0.01
RAB5C-206ENST00000550406 GNA11P29992 359 aa14.96□□□□□ -0.01
RAB5C-206ENST00000550406 CYP2C19P33261 490 aa14.96□□□□□ -0.01
RAB5C-206ENST00000550406 PKN2Q16513 984 aaKnown RBP14.96□□□□□ -0.01
RAB5C-206ENST00000550406 PRAMEF19Q5SWL8 479 aa14.96□□□□□ -0.01
RAB5C-206ENST00000550406 JAKMIP3Q5VZ66 844 aa14.96□□□□□ -0.01
RAB5C-206ENST00000550406 BLIDQ8IZY5 108 aa14.96□□□□□ -0.01
RAB5C-206ENST00000550406 FAM184AQ8NB25 1140 aa14.96□□□□□ -0.01
RAB5C-206ENST00000550406 TRPV1Q8NER1 839 aa14.96□□□□□ -0.01
RAB5C-206ENST00000550406 DNERQ8NFT8 737 aa14.96□□□□□ -0.01
RAB5C-206ENST00000550406 FBXO18Q8NFZ0 1043 aa14.96□□□□□ -0.01
RAB5C-206ENST00000550406 IL31RAQ8NI17 732 aa14.96□□□□□ -0.01
RAB5C-206ENST00000550406 TNFRSF25Q93038 417 aa14.96□□□□□ -0.01
RAB5C-206ENST00000550406 RMDN3Q96TC7 470 aa14.96□□□□□ -0.01
RAB5C-206ENST00000550406 TINF2Q9BSI4 451 aa14.96□□□□□ -0.01
RAB5C-206ENST00000550406 KATNBL1Q9H079 304 aa14.96□□□□□ -0.01
RAB5C-206ENST00000550406 SLC5A4Q9NY91 659 aa14.96□□□□□ -0.01
RAB5C-206ENST00000550406 MMP1P03956 469 aa14.95□□□□□ -0.02
RAB5C-206ENST00000550406 EIF2AK2P19525 551 aaKnown RBP14.95□□□□□ -0.02
RAB5C-206ENST00000550406 GRK4P32298 578 aa14.95□□□□□ -0.02
RAB5C-206ENST00000550406 UBXN2AP68543 259 aa14.95□□□□□ -0.02
RAB5C-206ENST00000550406 EARS2Q5JPH6 523 aaKnown RBP14.95□□□□□ -0.02
RAB5C-206ENST00000550406 COL13A1Q5TAT6 717 aaPredicted RBP14.95□□□□□ -0.02
RAB5C-206ENST00000550406 ARMCX2Q7L311 632 aa14.95□□□□□ -0.02
RAB5C-206ENST00000550406 TEX2Q8IWB9 1127 aa14.95□□□□□ -0.02
RAB5C-206ENST00000550406 MSL3Q8N5Y2 521 aaKnown RBP14.95□□□□□ -0.02
RAB5C-206ENST00000550406 SLAIN1Q8ND83 568 aa14.95□□□□□ -0.02
RAB5C-206ENST00000550406 NSUN6Q8TEA1 469 aaKnown RBP14.95□□□□□ -0.02
RAB5C-206ENST00000550406 SH3TC2Q8TF17 1288 aa14.95□□□□□ -0.02
RAB5C-206ENST00000550406 C8orf76Q96K31 380 aa14.95□□□□□ -0.02
RAB5C-206ENST00000550406 PDCD2LQ9BRP1 358 aa14.95□□□□□ -0.02
RAB5C-206ENST00000550406 MCOLN1Q9GZU1 580 aa14.95□□□□□ -0.02
RAB5C-206ENST00000550406 GLT8D2Q9H1C3 349 aa14.95□□□□□ -0.02
RAB5C-206ENST00000550406 ADD3Q9UEY8 706 aaKnown RBP14.95□□□□□ -0.02
RAB5C-206ENST00000550406 SYNGAP1Q96PV0 1343 aa14.94□□□□□ -0.02
RAB5C-206ENST00000550406 ASB14A6NK59 587 aa14.94□□□□□ -0.02
RAB5C-206ENST00000550406 BTBD18B2RXH4 712 aa14.94□□□□□ -0.02
RAB5C-206ENST00000550406 XBP1P17861 261 aa14.94□□□□□ -0.02
RAB5C-206ENST00000550406 MRPS9P82933 396 aaKnown RBP14.94□□□□□ -0.02
RAB5C-206ENST00000550406 CACNB2Q08289 660 aaPredicted RBP14.94□□□□□ -0.02
RAB5C-206ENST00000550406 PGM5Q15124 567 aa14.94□□□□□ -0.02
RAB5C-206ENST00000550406 MAP3K21Q5TCX8 1036 aa14.94□□□□□ -0.02
RAB5C-206ENST00000550406 ARHGEF16Q5VV41 709 aa14.94□□□□□ -0.02
RAB5C-206ENST00000550406 GALNT17Q6IS24 598 aa14.94□□□□□ -0.02
RAB5C-206ENST00000550406 TRMT44Q8IYL2 757 aaKnown RBP14.94□□□□□ -0.02
RAB5C-206ENST00000550406 REXO1Q8N1G1 1221 aaKnown RBP14.94□□□□□ -0.02
RAB5C-206ENST00000550406 SPRYD3Q8NCJ5 442 aa14.94□□□□□ -0.02
RAB5C-206ENST00000550406 CRYGNQ8WXF5 182 aa14.94□□□□□ -0.02
RAB5C-206ENST00000550406 ZFP91Q96JP5 570 aaPredicted RBP14.94□□□□□ -0.02
RAB5C-206ENST00000550406 ANO3Q9BYT9 981 aa14.94□□□□□ -0.02
RAB5C-206ENST00000550406 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.94□□□□□ -0.02
RAB5C-206ENST00000550406 DOCK5Q9H7D0 1870 aa14.94□□□□□ -0.02
RAB5C-206ENST00000550406 FRMPD3Q5JV73 1810 aa14.94□□□□□ -0.02
RAB5C-206ENST00000550406 HTTP42858 3142 aa14.93□□□□□ -0.02
RAB5C-206ENST00000550406 LOC102724159A0A0B4J2E5 919 aa14.93□□□□□ -0.02
RAB5C-206ENST00000550406 FAM205CA6NFA0 338 aa14.93□□□□□ -0.02
RAB5C-206ENST00000550406 FOSP01100 380 aaPredicted RBP14.93□□□□□ -0.02
RAB5C-206ENST00000550406 HMGCRP04035 888 aa14.93□□□□□ -0.02
RAB5C-206ENST00000550406 INHAP05111 366 aa14.93□□□□□ -0.02
RAB5C-206ENST00000550406 NR3C2P08235 984 aa14.93□□□□□ -0.02
RAB5C-206ENST00000550406 ZNF865P0CJ78 1059 aaPredicted RBP14.93□□□□□ -0.02
RAB5C-206ENST00000550406 NR5A1Q13285 461 aa14.93□□□□□ -0.02
RAB5C-206ENST00000550406 AP3B2Q13367 1082 aa14.93□□□□□ -0.02
RAB5C-206ENST00000550406 PWP2Q15269 919 aaKnown RBP14.93□□□□□ -0.02
RAB5C-206ENST00000550406 VSIG10LQ86VR7 867 aa14.93□□□□□ -0.02
RAB5C-206ENST00000550406 BICD2Q8TD16 824 aa14.93□□□□□ -0.02
RAB5C-206ENST00000550406 IWS1Q96ST2 819 aa14.93□□□□□ -0.02
RAB5C-206ENST00000550406 SPDYE3A6NKU9 549 aa14.92□□□□□ -0.02
RAB5C-206ENST00000550406 KIF28PB7ZC32 967 aa14.92□□□□□ -0.02
RAB5C-206ENST00000550406 RGS20O76081 388 aa14.92□□□□□ -0.02
RAB5C-206ENST00000550406 MYCLP12524 364 aaPredicted RBP14.92□□□□□ -0.02
RAB5C-206ENST00000550406 CYBAP13498 195 aa14.92□□□□□ -0.02
RAB5C-206ENST00000550406 KRT2P35908 639 aa14.92□□□□□ -0.02
RAB5C-206ENST00000550406 LARP1BQ659C4 914 aaKnown RBP14.92□□□□□ -0.02
RAB5C-206ENST00000550406 TAPT1Q6NXT6 567 aa14.92□□□□□ -0.02
RAB5C-206ENST00000550406 EEPD1Q7L9B9 569 aa14.92□□□□□ -0.02
RAB5C-206ENST00000550406 DIS3L2Q8IYB7 885 aaKnown RBP14.92□□□□□ -0.02
RAB5C-206ENST00000550406 ARMC5Q96C12 935 aa14.92□□□□□ -0.02
RAB5C-206ENST00000550406 PDGFCQ9NRA1 345 aa14.92□□□□□ -0.02
RAB5C-206ENST00000550406 RBM19Q9Y4C8 960 aaKnown RBP14.92□□□□□ -0.02
RAB5C-206ENST00000550406 PRKAR2AP13861 404 aaKnown RBP14.91□□□□□ -0.02
RAB5C-206ENST00000550406 SYT1P21579 422 aa14.91□□□□□ -0.02
RAB5C-206ENST00000550406 CCND3P30281 292 aaPredicted RBP14.91□□□□□ -0.02
RAB5C-206ENST00000550406 SREBF1P36956 1147 aa14.91□□□□□ -0.02
RAB5C-206ENST00000550406 PDE4DQ08499 809 aa14.91□□□□□ -0.02
RAB5C-206ENST00000550406 ACVR2BQ13705 512 aa14.91□□□□□ -0.02
RAB5C-206ENST00000550406 TRIM29Q14134 588 aa14.91□□□□□ -0.02
RAB5C-206ENST00000550406 BECN1Q14457 450 aa14.91□□□□□ -0.02
RAB5C-206ENST00000550406 MTFR1Q15390 333 aa14.91□□□□□ -0.02
RAB5C-206ENST00000550406 STXBP2Q15833 593 aa14.91□□□□□ -0.02
RAB5C-206ENST00000550406 SLC9C1Q4G0N8 1177 aa14.91□□□□□ -0.02
RAB5C-206ENST00000550406 TMEM63BQ5T3F8 832 aa14.91□□□□□ -0.02
RAB5C-206ENST00000550406 MFSD14CQ5VZR4 134 aa14.91□□□□□ -0.02
RAB5C-206ENST00000550406 PCNX4Q63HM2 1172 aa14.91□□□□□ -0.02
RAB5C-206ENST00000550406 FBXO16Q8IX29 292 aaPredicted RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms