RNA–Protein interactions for RNA: ENST00000550228.5

GPN3-207, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 353 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-207ENST00000550228 KCTD2Q14681 263 aa9.27□□□□□ -0.93
GPN3-207ENST00000550228 SF3A1Q15459 793 aaKnown RBP9.27□□□□□ -0.93
GPN3-207ENST00000550228 ARHGEF16Q5VV41 709 aa9.27□□□□□ -0.93
GPN3-207ENST00000550228 ANO1Q5XXA6 986 aa9.27□□□□□ -0.93
GPN3-207ENST00000550228 MCTP2Q6DN12 878 aa9.27□□□□□ -0.93
GPN3-207ENST00000550228 C17orf99Q6UX52 265 aa9.27□□□□□ -0.93
GPN3-207ENST00000550228 REM2Q8IYK8 340 aaPredicted RBP9.27□□□□□ -0.93
GPN3-207ENST00000550228 SAMD3Q8N6K7 520 aa9.27□□□□□ -0.93
GPN3-207ENST00000550228 ZFP91Q96JP5 570 aaPredicted RBP9.27□□□□□ -0.93
GPN3-207ENST00000550228 SPATA32Q96LK8 384 aa9.27□□□□□ -0.93
GPN3-207ENST00000550228 CFAP45Q9UL16 551 aa9.27□□□□□ -0.93
GPN3-207ENST00000550228 IVNS1ABPQ9Y6Y0 642 aa9.27□□□□□ -0.93
GPN3-207ENST00000550228 MGAMO43451 1857 aa9.27□□□□□ -0.93
GPN3-207ENST00000550228 PLXNA1Q9UIW2 1896 aa9.27□□□□□ -0.93
GPN3-207ENST00000550228 PFASO15067 1338 aa9.27□□□□□ -0.93
GPN3-207ENST00000550228 TRPA1O75762 1119 aa9.26□□□□□ -0.93
GPN3-207ENST00000550228 PGK2P07205 417 aa9.26□□□□□ -0.93
GPN3-207ENST00000550228 MYCLP12524 364 aaPredicted RBP9.26□□□□□ -0.93
GPN3-207ENST00000550228 MARCKSP29966 332 aaPredicted RBP9.26□□□□□ -0.93
GPN3-207ENST00000550228 MAPK4P31152 587 aa9.26□□□□□ -0.93
GPN3-207ENST00000550228 ZNF76P36508 570 aa9.26□□□□□ -0.93
GPN3-207ENST00000550228 SREBF1P36956 1147 aa9.26□□□□□ -0.93
GPN3-207ENST00000550228 ATL3Q6DD88 541 aa9.26□□□□□ -0.93
GPN3-207ENST00000550228 GPR142Q7Z601 462 aa9.26□□□□□ -0.93
GPN3-207ENST00000550228 PLEKHH3Q7Z736 793 aa9.26□□□□□ -0.93
GPN3-207ENST00000550228 TEX2Q8IWB9 1127 aa9.26□□□□□ -0.93
GPN3-207ENST00000550228 IL31RAQ8NI17 732 aa9.26□□□□□ -0.93
GPN3-207ENST00000550228 LEO1Q8WVC0 666 aaPredicted RBP9.26□□□□□ -0.93
GPN3-207ENST00000550228 RMDN3Q96TC7 470 aa9.26□□□□□ -0.93
GPN3-207ENST00000550228 PXMP2Q9NR77 195 aa9.26□□□□□ -0.93
GPN3-207ENST00000550228 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.26□□□□□ -0.93
GPN3-207ENST00000550228 POLR3EQ9NVU0 708 aa9.26□□□□□ -0.93
GPN3-207ENST00000550228 RNF186Q9NXI6 227 aa9.26□□□□□ -0.93
GPN3-207ENST00000550228 MAP3K20Q9NYL2 800 aaKnown RBP9.26□□□□□ -0.93
GPN3-207ENST00000550228 RTEL1Q9NZ71 1219 aa9.26□□□□□ -0.93
GPN3-207ENST00000550228 MRVI1Q9Y6F6 885 aa9.26□□□□□ -0.93
GPN3-207ENST00000550228 DDX49Q9Y6V7 483 aaKnown RBP9.26□□□□□ -0.93
GPN3-207ENST00000550228 RPTORQ8N122 1335 aa9.26□□□□□ -0.93
GPN3-207ENST00000550228 DOCK3Q8IZD9 2030 aa9.26□□□□□ -0.93
GPN3-207ENST00000550228 MCM3APO60318 1980 aa9.25□□□□□ -0.93
GPN3-207ENST00000550228 GOLGA6L22H0YM25 854 aa9.25□□□□□ -0.93
GPN3-207ENST00000550228 SPTLC2O15270 562 aa9.25□□□□□ -0.93
GPN3-207ENST00000550228 SLC37A4O43826 429 aa9.25□□□□□ -0.93
GPN3-207ENST00000550228 EDIL3O43854 480 aa9.25□□□□□ -0.93
GPN3-207ENST00000550228 YEATS4O95619 227 aa9.25□□□□□ -0.93
GPN3-207ENST00000550228 ADORA2AP29274 412 aa9.25□□□□□ -0.93
GPN3-207ENST00000550228 NASPP49321 788 aaPredicted RBP9.25□□□□□ -0.93
GPN3-207ENST00000550228 PGM5Q15124 567 aa9.25□□□□□ -0.93
GPN3-207ENST00000550228 CLEC17AQ6ZS10 378 aa9.25□□□□□ -0.93
GPN3-207ENST00000550228 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.25□□□□□ -0.93
GPN3-207ENST00000550228 POTEDQ86YR6 584 aa9.25□□□□□ -0.93
GPN3-207ENST00000550228 UIMC1Q96RL1 719 aa9.25□□□□□ -0.93
GPN3-207ENST00000550228 SCAND2PQ9GZW5 306 aaPredicted RBP9.25□□□□□ -0.93
GPN3-207ENST00000550228 DDX25Q9UHL0 483 aaKnown RBP9.25□□□□□ -0.93
GPN3-207ENST00000550228 CEP131Q9UPN4 1083 aa9.25□□□□□ -0.93
GPN3-207ENST00000550228 LRRC37A2A6NM11 1700 aa9.25□□□□□ -0.93
GPN3-207ENST00000550228 ZNF236Q9UL36 1845 aa9.24□□□□□ -0.93
GPN3-207ENST00000550228 SOWAHBA6NEL2 793 aa9.24□□□□□ -0.93
GPN3-207ENST00000550228 TNPO2O14787 897 aaKnown RBP9.24□□□□□ -0.93
GPN3-207ENST00000550228 NEMFO60524 1076 aa9.24□□□□□ -0.93
GPN3-207ENST00000550228 COBLO75128 1261 aa9.24□□□□□ -0.93
GPN3-207ENST00000550228 PRPF40AO75400 957 aaKnown RBP9.24□□□□□ -0.93
GPN3-207ENST00000550228 BMP15O95972 392 aa9.24□□□□□ -0.93
GPN3-207ENST00000550228 CYP3A4P08684 503 aa9.24□□□□□ -0.93
GPN3-207ENST00000550228 GCFC2P16383 781 aaKnown RBP9.24□□□□□ -0.93
GPN3-207ENST00000550228 PTPREP23469 700 aa9.24□□□□□ -0.93
GPN3-207ENST00000550228 CCND2P30279 289 aa9.24□□□□□ -0.93
GPN3-207ENST00000550228 MCM4P33991 863 aa9.24□□□□□ -0.93
GPN3-207ENST00000550228 ME1P48163 572 aa9.24□□□□□ -0.93
GPN3-207ENST00000550228 ALDH5A1P51649 535 aaPredicted RBP9.24□□□□□ -0.93
GPN3-207ENST00000550228 USP11P51784 963 aa9.24□□□□□ -0.93
GPN3-207ENST00000550228 PTGDRQ13258 359 aa9.24□□□□□ -0.93
GPN3-207ENST00000550228 SLC39A14Q15043 492 aa9.24□□□□□ -0.93
GPN3-207ENST00000550228 PTPAQ15257 358 aa9.24□□□□□ -0.93
GPN3-207ENST00000550228 CSPP1Q1MSJ5 1256 aa9.24□□□□□ -0.93
GPN3-207ENST00000550228 PRR16Q569H4 304 aa9.24□□□□□ -0.93
GPN3-207ENST00000550228 FAM133AQ8N9E0 248 aa9.24□□□□□ -0.93
GPN3-207ENST00000550228 LINC00301Q8NCQ3 95 aa9.24□□□□□ -0.93
GPN3-207ENST00000550228 NSUN6Q8TEA1 469 aaKnown RBP9.24□□□□□ -0.93
GPN3-207ENST00000550228 CRYGNQ8WXF5 182 aa9.24□□□□□ -0.93
GPN3-207ENST00000550228 NAP1L4Q99733 375 aaKnown RBP9.24□□□□□ -0.93
GPN3-207ENST00000550228 PDCD2LQ9BRP1 358 aa9.24□□□□□ -0.93
GPN3-207ENST00000550228 ARHGAP39Q9C0H5 1083 aa9.24□□□□□ -0.93
GPN3-207ENST00000550228 MAF1Q9H063 256 aa9.24□□□□□ -0.93
GPN3-207ENST00000550228 TMEM60Q9H2L4 133 aa9.24□□□□□ -0.93
GPN3-207ENST00000550228 ADD3Q9UEY8 706 aaKnown RBP9.24□□□□□ -0.93
GPN3-207ENST00000550228 RCOR1Q9UKL0 485 aa9.24□□□□□ -0.93
GPN3-207ENST00000550228 ASTN1O14525 1302 aa9.24□□□□□ -0.93
GPN3-207ENST00000550228 FRMPD4Q14CM0 1322 aa9.24□□□□□ -0.93
GPN3-207ENST00000550228 KIAA1217Q5T5P2 1943 aa9.23□□□□□ -0.93
GPN3-207ENST00000550228 DNAJC25-GNG10A0A024R161 153 aa9.23□□□□□ -0.93
GPN3-207ENST00000550228 SLC15A5A6NIM6 579 aa9.23□□□□□ -0.93
GPN3-207ENST00000550228 DDX11L8A8MPP1 907 aa9.23□□□□□ -0.93
GPN3-207ENST00000550228 FAM86B1E9PN63 330 aa9.23□□□□□ -0.93
GPN3-207ENST00000550228 STRNO43815 780 aa9.23□□□□□ -0.93
GPN3-207ENST00000550228 MARCH6O60337 910 aa9.23□□□□□ -0.93
GPN3-207ENST00000550228 GADD45BO75293 160 aaPredicted RBP9.23□□□□□ -0.93
GPN3-207ENST00000550228 NR3C2P08235 984 aa9.23□□□□□ -0.93
GPN3-207ENST00000550228 FAM86B2P0C5J1 330 aa9.23□□□□□ -0.93
GPN3-207ENST00000550228 OR52Z1P0C646 297 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms