RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 ASPRV1Q53RT3 343 aa15.62■□□□□ 0.09
NUP188-211ENST00000550219 ADGRF4Q8IZF3 695 aa15.62■□□□□ 0.09
NUP188-211ENST00000550219 DNERQ8NFT8 737 aa15.62■□□□□ 0.09
NUP188-211ENST00000550219 SCFD2Q8WU76 684 aa15.62■□□□□ 0.09
NUP188-211ENST00000550219 NOC4LQ9BVI4 516 aaKnown RBP15.62■□□□□ 0.09
NUP188-211ENST00000550219 KRT23Q9C075 422 aa15.62■□□□□ 0.09
NUP188-211ENST00000550219 VAT1LQ9HCJ6 419 aa15.62■□□□□ 0.09
NUP188-211ENST00000550219 TRMT13Q9NUP7 481 aaKnown RBP15.62■□□□□ 0.09
NUP188-211ENST00000550219 ZSWIM5Q9P217 1185 aa15.62■□□□□ 0.09
NUP188-211ENST00000550219 U3KPZ7 1027 aaPredicted RBP15.62■□□□□ 0.09
NUP188-211ENST00000550219 ABCB11O95342 1321 aa15.62■□□□□ 0.09
NUP188-211ENST00000550219 RBM47A0AV96 593 aaKnown RBP15.61■□□□□ 0.09
NUP188-211ENST00000550219 B4DLN1 442 aa15.61■□□□□ 0.09
NUP188-211ENST00000550219 CYP2C9P11712 490 aa15.61■□□□□ 0.09
NUP188-211ENST00000550219 EDNRBP24530 442 aa15.61■□□□□ 0.09
NUP188-211ENST00000550219 MRPL12P52815 198 aaKnown RBP15.61■□□□□ 0.09
NUP188-211ENST00000550219 PURAQ00577 322 aaKnown RBP15.61■□□□□ 0.09
NUP188-211ENST00000550219 GRIN2CQ14957 1233 aa15.61■□□□□ 0.09
NUP188-211ENST00000550219 NECTIN1Q15223 517 aa15.61■□□□□ 0.09
NUP188-211ENST00000550219 QRICH1Q2TAL8 776 aa15.61■□□□□ 0.09
NUP188-211ENST00000550219 BRDTQ58F21 947 aaPredicted RBP15.61■□□□□ 0.09
NUP188-211ENST00000550219 IFIT1BQ5T764 474 aaKnown RBP15.61■□□□□ 0.09
NUP188-211ENST00000550219 OTOP2Q7RTS6 562 aa15.61■□□□□ 0.09
NUP188-211ENST00000550219 SCLYQ96I15 445 aa15.61■□□□□ 0.09
NUP188-211ENST00000550219 MTG1Q9BT17 334 aaPredicted RBP15.61■□□□□ 0.09
NUP188-211ENST00000550219 PBX4Q9BYU1 374 aa15.61■□□□□ 0.09
NUP188-211ENST00000550219 WNT8AQ9H1J5 351 aa15.61■□□□□ 0.09
NUP188-211ENST00000550219 ALDH8A1Q9H2A2 487 aaPredicted RBP15.61■□□□□ 0.09
NUP188-211ENST00000550219 MTIF3Q9H2K0 278 aaKnown RBP15.61■□□□□ 0.09
NUP188-211ENST00000550219 ZNF576Q9H609 170 aa15.61■□□□□ 0.09
NUP188-211ENST00000550219 CNNM2Q9H8M5 875 aa15.61■□□□□ 0.09
NUP188-211ENST00000550219 RBM8AQ9Y5S9 174 aaKnown RBP15.61■□□□□ 0.09
NUP188-211ENST00000550219 NKRFO15226 690 aaKnown RBP eCLIP15.6■□□□□ 0.09
NUP188-211ENST00000550219 ARIH2O95376 493 aa15.6■□□□□ 0.09
NUP188-211ENST00000550219 TXNP10599 105 aaKnown RBP15.6■□□□□ 0.09
NUP188-211ENST00000550219 NT5C2P49902 561 aa15.6■□□□□ 0.09
NUP188-211ENST00000550219 FBXO11Q86XK2 927 aa15.6■□□□□ 0.09
NUP188-211ENST00000550219 TBC1D5Q92609 795 aa15.6■□□□□ 0.09
NUP188-211ENST00000550219 KCNB2Q92953 911 aa15.6■□□□□ 0.09
NUP188-211ENST00000550219 SEZ6LQ9BYH1 1024 aa15.6■□□□□ 0.09
NUP188-211ENST00000550219 CXXC1Q9P0U4 656 aaPredicted RBP15.6■□□□□ 0.09
NUP188-211ENST00000550219 COL20A1Q9P218 1284 aa15.6■□□□□ 0.09
NUP188-211ENST00000550219 ZBBXA8MT70 800 aa15.59■□□□□ 0.09
NUP188-211ENST00000550219 FGBP02675 491 aa15.59■□□□□ 0.09
NUP188-211ENST00000550219 TTLL4Q14679 1199 aa15.59■□□□□ 0.09
NUP188-211ENST00000550219 RASIP1Q5U651 963 aa15.59■□□□□ 0.09
NUP188-211ENST00000550219 SEPT14Q6ZU15 432 aa15.59■□□□□ 0.09
NUP188-211ENST00000550219 CYB5R4Q7L1T6 521 aa15.59■□□□□ 0.09
NUP188-211ENST00000550219 SYTL5Q8TDW5 730 aaPredicted RBP15.59■□□□□ 0.09
NUP188-211ENST00000550219 HERVK_113Q902F9 699 aa15.59■□□□□ 0.09
NUP188-211ENST00000550219 ANKS1AQ92625 1134 aa15.59■□□□□ 0.09
NUP188-211ENST00000550219 TAAR1Q96RJ0 339 aa15.59■□□□□ 0.09
NUP188-211ENST00000550219 COL25A1Q9BXS0 654 aaPredicted RBP15.59■□□□□ 0.09
NUP188-211ENST00000550219 JMJD4Q9H9V9 463 aa15.59■□□□□ 0.09
NUP188-211ENST00000550219 CFBP00751 764 aa15.58■□□□□ 0.08
NUP188-211ENST00000550219 EIF2AK2P19525 551 aaKnown RBP15.58■□□□□ 0.08
NUP188-211ENST00000550219 HSPA4P34932 840 aa15.58■□□□□ 0.08
NUP188-211ENST00000550219 NBPF20Q3BBV1 942 aa15.58■□□□□ 0.08
NUP188-211ENST00000550219 CHST3Q7LGC8 479 aa15.58■□□□□ 0.08
NUP188-211ENST00000550219 DEFB128Q7Z7B8 93 aa15.58■□□□□ 0.08
NUP188-211ENST00000550219 MCF2L2Q86YR7 1114 aa15.58■□□□□ 0.08
NUP188-211ENST00000550219 STAG2Q8N3U4 1231 aa15.58■□□□□ 0.08
NUP188-211ENST00000550219 RMDN3Q96TC7 470 aa15.58■□□□□ 0.08
NUP188-211ENST00000550219 NKX2-4Q9H2Z4 354 aa15.58■□□□□ 0.08
NUP188-211ENST00000550219 MSRAQ9UJ68 235 aa15.58■□□□□ 0.08
NUP188-211ENST00000550219 MRPL11Q9Y3B7 192 aaKnown RBP15.58■□□□□ 0.08
NUP188-211ENST00000550219 LAMA2P24043 3122 aaKnown RBP15.58■□□□□ 0.08
NUP188-211ENST00000550219 SUPT20HL2P0C7V6 817 aa15.57■□□□□ 0.08
NUP188-211ENST00000550219 TRDNQ13061 729 aa15.57■□□□□ 0.08
NUP188-211ENST00000550219 RAB30Q15771 203 aa15.57■□□□□ 0.08
NUP188-211ENST00000550219 LY6KQ17RY6 165 aa15.57■□□□□ 0.08
NUP188-211ENST00000550219 TSGA10IPQ3SY00 556 aa15.57■□□□□ 0.08
NUP188-211ENST00000550219 ARHGEF16Q5VV41 709 aa15.57■□□□□ 0.08
NUP188-211ENST00000550219 CREB3L3Q68CJ9 461 aa15.57■□□□□ 0.08
NUP188-211ENST00000550219 HOMER1Q86YM7 354 aa15.57■□□□□ 0.08
NUP188-211ENST00000550219 RGS22Q8NE09 1264 aa15.57■□□□□ 0.08
NUP188-211ENST00000550219 NSUN6Q8TEA1 469 aaKnown RBP15.57■□□□□ 0.08
NUP188-211ENST00000550219 AFG1LQ8WV93 481 aa15.57■□□□□ 0.08
NUP188-211ENST00000550219 IL17RAQ96F46 866 aa15.57■□□□□ 0.08
NUP188-211ENST00000550219 GAS2L1Q99501 681 aaPredicted RBP15.57■□□□□ 0.08
NUP188-211ENST00000550219 PRDM12Q9H4Q4 367 aa15.57■□□□□ 0.08
NUP188-211ENST00000550219 NOD1Q9Y239 953 aa15.57■□□□□ 0.08
NUP188-211ENST00000550219 TANC1Q9C0D5 1861 aa15.57■□□□□ 0.08
NUP188-211ENST00000550219 MYH6P13533 1939 aa15.56■□□□□ 0.08
NUP188-211ENST00000550219 A6NJR5 290 aa15.56■□□□□ 0.08
NUP188-211ENST00000550219 KLRF2D3W0D1 207 aa15.56■□□□□ 0.08
NUP188-211ENST00000550219 SLC27A2O14975 620 aa15.56■□□□□ 0.08
NUP188-211ENST00000550219 GH1P01241 217 aa15.56■□□□□ 0.08
NUP188-211ENST00000550219 MMP3P08254 477 aa15.56■□□□□ 0.08
NUP188-211ENST00000550219 CYP21A2P08686 494 aa15.56■□□□□ 0.08
NUP188-211ENST00000550219 RABGGTBP53611 331 aa15.56■□□□□ 0.08
NUP188-211ENST00000550219 STXBP2Q15833 593 aa15.56■□□□□ 0.08
NUP188-211ENST00000550219 RALYLQ86SE5 291 aaKnown RBP15.56■□□□□ 0.08
NUP188-211ENST00000550219 RPUSD2Q8IZ73 545 aaKnown RBP15.56■□□□□ 0.08
NUP188-211ENST00000550219 USP38Q8NB14 1042 aa15.56■□□□□ 0.08
NUP188-211ENST00000550219 PPM1EQ8WY54 764 aa15.56■□□□□ 0.08
NUP188-211ENST00000550219 AMNQ9BXJ7 453 aa15.56■□□□□ 0.08
NUP188-211ENST00000550219 YBX2Q9Y2T7 364 aaKnown RBP15.56■□□□□ 0.08
NUP188-211ENST00000550219 GBF1Q92538 1859 aa15.56■□□□□ 0.08
NUP188-211ENST00000550219 IFIT3O14879 490 aaKnown RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms