RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 TRIM22Q8IYM9 498 aa22.29■■□□□ 1.16
DDX54-207ENST00000550016 IL27Q8NEV9 243 aa22.29■■□□□ 1.16
DDX54-207ENST00000550016 SHISA4Q96DD7 197 aa22.29■■□□□ 1.16
DDX54-207ENST00000550016 IWS1Q96ST2 819 aa22.29■■□□□ 1.16
DDX54-207ENST00000550016 BARHL2Q9NY43 387 aa22.29■■□□□ 1.16
DDX54-207ENST00000550016 OGDHLQ9ULD0 1010 aa22.29■■□□□ 1.16
DDX54-207ENST00000550016 FAM184BQ9ULE4 1060 aa22.29■■□□□ 1.16
DDX54-207ENST00000550016 STXBP3O00186 592 aa22.28■■□□□ 1.16
DDX54-207ENST00000550016 PIK3CDO00329 1044 aa22.28■■□□□ 1.16
DDX54-207ENST00000550016 AKR1A1P14550 325 aa22.28■■□□□ 1.16
DDX54-207ENST00000550016 NAPAP54920 295 aa22.28■■□□□ 1.16
DDX54-207ENST00000550016 PKN1Q16512 942 aa22.28■■□□□ 1.16
DDX54-207ENST00000550016 ME3Q16798 604 aa22.28■■□□□ 1.16
DDX54-207ENST00000550016 FCHSD1Q86WN1 690 aa22.28■■□□□ 1.16
DDX54-207ENST00000550016 VTA1Q9NP79 307 aa22.28■■□□□ 1.16
DDX54-207ENST00000550016 PXMP2Q9NR77 195 aa22.28■■□□□ 1.16
DDX54-207ENST00000550016 LIMCH1Q9UPQ0 1083 aa22.28■■□□□ 1.16
DDX54-207ENST00000550016 MEIS2O14770 477 aa22.27■■□□□ 1.16
DDX54-207ENST00000550016 PPFIA3O75145 1194 aa22.27■■□□□ 1.16
DDX54-207ENST00000550016 CDKL5O76039 1030 aa22.27■■□□□ 1.16
DDX54-207ENST00000550016 CCDC144BQ3MJ40 725 aa22.27■■□□□ 1.16
DDX54-207ENST00000550016 USP17L6PQ6QN14 398 aa22.27■■□□□ 1.16
DDX54-207ENST00000550016 TEX2Q8IWB9 1127 aa22.27■■□□□ 1.16
DDX54-207ENST00000550016 SMARCC2Q8TAQ2 1214 aa22.27■■□□□ 1.16
DDX54-207ENST00000550016 MYH7BA7E2Y1 1941 aa22.26■■□□□ 1.15
DDX54-207ENST00000550016 LARGE1O95461 756 aa22.26■■□□□ 1.15
DDX54-207ENST00000550016 RARBP10826 455 aa22.26■■□□□ 1.15
DDX54-207ENST00000550016 EIF2AK2P19525 551 aaKnown RBP22.26■■□□□ 1.15
DDX54-207ENST00000550016 ANO1Q5XXA6 986 aa22.26■■□□□ 1.15
DDX54-207ENST00000550016 TYW1BQ6NUM6 668 aa22.26■■□□□ 1.15
DDX54-207ENST00000550016 TAPT1Q6NXT6 567 aa22.26■■□□□ 1.15
DDX54-207ENST00000550016 EEPD1Q7L9B9 569 aa22.26■■□□□ 1.15
DDX54-207ENST00000550016 NECAB1Q8N987 351 aa22.26■■□□□ 1.15
DDX54-207ENST00000550016 ANKLE1Q8NAG6 615 aa22.26■■□□□ 1.15
DDX54-207ENST00000550016 RIC8AQ9NPQ8 531 aa22.26■■□□□ 1.15
DDX54-207ENST00000550016 SMCO2A6NFE2 343 aa22.25■■□□□ 1.15
DDX54-207ENST00000550016 NR3C2P08235 984 aa22.25■■□□□ 1.15
DDX54-207ENST00000550016 STXBP2Q15833 593 aa22.25■■□□□ 1.15
DDX54-207ENST00000550016 IQSEC1Q6DN90 963 aa22.25■■□□□ 1.15
DDX54-207ENST00000550016 FBXO16Q8IX29 292 aaPredicted RBP22.25■■□□□ 1.15
DDX54-207ENST00000550016 GTF3C6Q969F1 213 aa22.25■■□□□ 1.15
DDX54-207ENST00000550016 PDCD2LQ9BRP1 358 aa22.25■■□□□ 1.15
DDX54-207ENST00000550016 GLT8D2Q9H1C3 349 aa22.25■■□□□ 1.15
DDX54-207ENST00000550016 DEXIO95424 95 aa22.24■■□□□ 1.15
DDX54-207ENST00000550016 ADCY7P51828 1080 aa22.24■■□□□ 1.15
DDX54-207ENST00000550016 CCDC12Q8WUD4 166 aaPredicted RBP22.24■■□□□ 1.15
DDX54-207ENST00000550016 ZSCAN31Q96LW9 406 aaPredicted RBP22.24■■□□□ 1.15
DDX54-207ENST00000550016 PDGFCQ9NRA1 345 aa22.24■■□□□ 1.15
DDX54-207ENST00000550016 RBM47A0AV96 593 aaKnown RBP22.23■■□□□ 1.15
DDX54-207ENST00000550016 ST18O60284 1047 aa22.23■■□□□ 1.15
DDX54-207ENST00000550016 DUSP11O75319 330 aaKnown RBP22.23■■□□□ 1.15
DDX54-207ENST00000550016 TNFAIP2Q03169 654 aa22.23■■□□□ 1.15
DDX54-207ENST00000550016 PGM5Q15124 567 aa22.23■■□□□ 1.15
DDX54-207ENST00000550016 UBE2SQ16763 222 aa22.23■■□□□ 1.15
DDX54-207ENST00000550016 ARRDC4Q8NCT1 418 aa22.23■■□□□ 1.15
DDX54-207ENST00000550016 XPNPEP3Q9NQH7 507 aa22.23■■□□□ 1.15
DDX54-207ENST00000550016 SH3GLB2Q9NR46 395 aa22.23■■□□□ 1.15
DDX54-207ENST00000550016 FRMPD4Q14CM0 1322 aa22.23■■□□□ 1.15
DDX54-207ENST00000550016 ESYT2A0FGR8 921 aa22.22■■□□□ 1.15
DDX54-207ENST00000550016 EIF3JO75822 258 aaKnown RBP22.22■■□□□ 1.15
DDX54-207ENST00000550016 FARP2O94887 1054 aaPredicted RBP22.22■■□□□ 1.15
DDX54-207ENST00000550016 CTDNEP1O95476 244 aa22.22■■□□□ 1.15
DDX54-207ENST00000550016 MYCLP12524 364 aaPredicted RBP22.22■■□□□ 1.15
DDX54-207ENST00000550016 CCND2P30279 289 aa22.22■■□□□ 1.15
DDX54-207ENST00000550016 ADCYAP1R1P41586 468 aa22.22■■□□□ 1.15
DDX54-207ENST00000550016 VSIG10LQ86VR7 867 aa22.22■■□□□ 1.15
DDX54-207ENST00000550016 ZMYND12Q9H0C1 365 aa22.22■■□□□ 1.15
DDX54-207ENST00000550016 STK36Q9NRP7 1315 aa22.22■■□□□ 1.15
DDX54-207ENST00000550016 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.21■■□□□ 1.15
DDX54-207ENST00000550016 ADCY6O43306 1168 aa22.21■■□□□ 1.15
DDX54-207ENST00000550016 UBE2Q1Q7Z7E8 422 aa22.21■■□□□ 1.15
DDX54-207ENST00000550016 CCDC148Q8NFR7 591 aa22.21■■□□□ 1.15
DDX54-207ENST00000550016 IL31RAQ8NI17 732 aa22.21■■□□□ 1.15
DDX54-207ENST00000550016 LENG1Q96BZ8 264 aaPredicted RBP22.21■■□□□ 1.15
DDX54-207ENST00000550016 WDR11Q9BZH6 1224 aa22.21■■□□□ 1.15
DDX54-207ENST00000550016 C6orf50Q9HD87 102 aa22.21■■□□□ 1.15
DDX54-207ENST00000550016 SH2B1Q9NRF2 756 aaPredicted RBP22.21■■□□□ 1.15
DDX54-207ENST00000550016 BRCA2P51587 3418 aa22.21■■□□□ 1.15
DDX54-207ENST00000550016 SPDYE3A6NKU9 549 aa22.2■■□□□ 1.14
DDX54-207ENST00000550016 FOSP01100 380 aaPredicted RBP22.2■■□□□ 1.14
DDX54-207ENST00000550016 SMPD1P17405 629 aa22.2■■□□□ 1.14
DDX54-207ENST00000550016 GNA11P29992 359 aa22.2■■□□□ 1.14
DDX54-207ENST00000550016 MNX1P50219 401 aaPredicted RBP22.2■■□□□ 1.14
DDX54-207ENST00000550016 SCFD2Q8WU76 684 aa22.2■■□□□ 1.14
DDX54-207ENST00000550016 VPS54Q9P1Q0 977 aa22.2■■□□□ 1.14
DDX54-207ENST00000550016 PCDHA6Q9UN73 950 aa22.2■■□□□ 1.14
DDX54-207ENST00000550016 PCDHA8Q9Y5H6 950 aa22.2■■□□□ 1.14
DDX54-207ENST00000550016 PGK1P00558 417 aa22.19■■□□□ 1.14
DDX54-207ENST00000550016 LRRC41Q15345 812 aa22.19■■□□□ 1.14
DDX54-207ENST00000550016 DUSP28Q4G0W2 176 aa22.19■■□□□ 1.14
DDX54-207ENST00000550016 GJC2Q5T442 439 aaPredicted RBP22.19■■□□□ 1.14
DDX54-207ENST00000550016 XRRA1Q6P2D8 792 aa22.19■■□□□ 1.14
DDX54-207ENST00000550016 SEPT14Q6ZU15 432 aa22.19■■□□□ 1.14
DDX54-207ENST00000550016 RNF180Q86T96 592 aa22.19■■□□□ 1.14
DDX54-207ENST00000550016 FAM177A1Q8N128 213 aaPredicted RBP22.19■■□□□ 1.14
DDX54-207ENST00000550016 PAWRQ96IZ0 340 aaKnown RBP22.19■■□□□ 1.14
DDX54-207ENST00000550016 UPF3AQ9H1J1 476 aaKnown RBP22.19■■□□□ 1.14
DDX54-207ENST00000550016 EHMT1Q9H9B1 1298 aa22.19■■□□□ 1.14
DDX54-207ENST00000550016 SPC25Q9HBM1 224 aa22.19■■□□□ 1.14
DDX54-207ENST00000550016 ORC3Q9UBD5 711 aaPredicted RBP22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms