RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 UTP11Q9Y3A2 253 aaKnown RBP10.17□□□□□ -0.78
PPFIA2-216ENST00000549396 IQSEC2Q5JU85 1478 aa10.17□□□□□ -0.78
PPFIA2-216ENST00000549396 DAPK3O43293 454 aa10.16□□□□□ -0.78
PPFIA2-216ENST00000549396 VIMP08670 466 aaKnown RBP10.16□□□□□ -0.78
PPFIA2-216ENST00000549396 MAGEA1P43355 309 aa10.16□□□□□ -0.78
PPFIA2-216ENST00000549396 LMNB2Q03252 620 aa10.16□□□□□ -0.78
PPFIA2-216ENST00000549396 C2orf40Q9H1Z8 148 aa10.16□□□□□ -0.78
PPFIA2-216ENST00000549396 PRKAG2Q9UGJ0 569 aa10.16□□□□□ -0.78
PPFIA2-216ENST00000549396 RIPOR2Q9Y4F9 1068 aa10.16□□□□□ -0.78
PPFIA2-216ENST00000549396 SRPRBQ9Y5M8 271 aaKnown RBP10.16□□□□□ -0.78
PPFIA2-216ENST00000549396 KCNJ18B7U540 433 aa10.16□□□□□ -0.78
PPFIA2-216ENST00000549396 DDX39AO00148 427 aaKnown RBP10.16□□□□□ -0.78
PPFIA2-216ENST00000549396 JAK2O60674 1132 aa10.16□□□□□ -0.78
PPFIA2-216ENST00000549396 KCNJ12Q14500 433 aa10.16□□□□□ -0.78
PPFIA2-216ENST00000549396 NFIXQ14938 502 aa10.16□□□□□ -0.78
PPFIA2-216ENST00000549396 ZNF569Q5MCW4 686 aa10.16□□□□□ -0.78
PPFIA2-216ENST00000549396 ANKS4BQ8N8V4 417 aa10.16□□□□□ -0.78
PPFIA2-216ENST00000549396 AGBL3Q8NEM8 1001 aa10.16□□□□□ -0.78
PPFIA2-216ENST00000549396 COA7Q96BR5 231 aa10.16□□□□□ -0.78
PPFIA2-216ENST00000549396 ERO1AQ96HE7 468 aa10.16□□□□□ -0.78
PPFIA2-216ENST00000549396 CAMTA2O94983 1202 aa10.16□□□□□ -0.78
PPFIA2-216ENST00000549396 LRRC63Q05C16 580 aa10.16□□□□□ -0.78
PPFIA2-216ENST00000549396 HLFQ16534 295 aa10.16□□□□□ -0.78
PPFIA2-216ENST00000549396 OSBP2Q969R2 916 aa10.16□□□□□ -0.78
PPFIA2-216ENST00000549396 LMBRD1Q9NUN5 540 aa10.16□□□□□ -0.78
PPFIA2-216ENST00000549396 GUCA1BQ9UMX6 200 aa10.16□□□□□ -0.78
PPFIA2-216ENST00000549396 TNS2Q63HR2 1409 aa10.16□□□□□ -0.78
PPFIA2-216ENST00000549396 SLFN14P0C7P3 912 aa10.16□□□□□ -0.78
PPFIA2-216ENST00000549396 MCAMP43121 646 aa10.16□□□□□ -0.78
PPFIA2-216ENST00000549396 THAP9Q9H5L6 903 aa10.16□□□□□ -0.78
PPFIA2-216ENST00000549396 CBX8Q9HC52 389 aa10.16□□□□□ -0.78
PPFIA2-216ENST00000549396 RCOR1Q9UKL0 485 aa10.16□□□□□ -0.78
PPFIA2-216ENST00000549396 F8W8V4 182 aa10.15□□□□□ -0.78
PPFIA2-216ENST00000549396 TECP42680 631 aa10.15□□□□□ -0.78
PPFIA2-216ENST00000549396 AP3M2P53677 418 aa10.15□□□□□ -0.78
PPFIA2-216ENST00000549396 TERF1P54274 439 aa10.15□□□□□ -0.78
PPFIA2-216ENST00000549396 FOXO4P98177 505 aa10.15□□□□□ -0.78
PPFIA2-216ENST00000549396 KIF23Q02241 960 aaPredicted RBP10.15□□□□□ -0.78
PPFIA2-216ENST00000549396 STXBP2Q15833 593 aa10.15□□□□□ -0.78
PPFIA2-216ENST00000549396 CFAP221Q4G0U5 840 aa10.15□□□□□ -0.78
PPFIA2-216ENST00000549396 ZNF658Q5TYW1 1059 aaPredicted RBP10.15□□□□□ -0.78
PPFIA2-216ENST00000549396 NEDD1Q8NHV4 660 aa10.15□□□□□ -0.78
PPFIA2-216ENST00000549396 P3H4Q92791 437 aa10.15□□□□□ -0.78
PPFIA2-216ENST00000549396 CTTNBP2NLQ9P2B4 639 aa10.15□□□□□ -0.78
PPFIA2-216ENST00000549396 USP17L15C9J2P7 530 aa10.15□□□□□ -0.78
PPFIA2-216ENST00000549396 USP17L10C9JJH3 530 aa10.15□□□□□ -0.78
PPFIA2-216ENST00000549396 USP17L13C9JLJ4 530 aa10.15□□□□□ -0.78
PPFIA2-216ENST00000549396 USP17L11C9JVI0 530 aa10.15□□□□□ -0.78
PPFIA2-216ENST00000549396 USP17L18D6R9N7 530 aa10.15□□□□□ -0.78
PPFIA2-216ENST00000549396 USP17L22D6RA61 530 aa10.15□□□□□ -0.78
PPFIA2-216ENST00000549396 USP17L17D6RBQ6 530 aa10.15□□□□□ -0.78
PPFIA2-216ENST00000549396 USP17L19D6RCP7 530 aa10.15□□□□□ -0.78
PPFIA2-216ENST00000549396 USP17L20D6RJB6 530 aa10.15□□□□□ -0.78
PPFIA2-216ENST00000549396 PPFIA3O75145 1194 aa10.15□□□□□ -0.78
PPFIA2-216ENST00000549396 KRT10P13645 584 aa10.15□□□□□ -0.78
PPFIA2-216ENST00000549396 TGFB2P61812 414 aa10.15□□□□□ -0.78
PPFIA2-216ENST00000549396 USP17L24Q0WX57 530 aa10.15□□□□□ -0.78
PPFIA2-216ENST00000549396 PTGDRQ13258 359 aa10.15□□□□□ -0.78
PPFIA2-216ENST00000549396 PLIN2Q99541 437 aa10.15□□□□□ -0.78
PPFIA2-216ENST00000549396 V9GYY5 206 aaPredicted RBP10.15□□□□□ -0.78
PPFIA2-216ENST00000549396 E7EVH7 732 aa10.15□□□□□ -0.78
PPFIA2-216ENST00000549396 HARSP12081 509 aaKnown RBP10.15□□□□□ -0.78
PPFIA2-216ENST00000549396 MAP7Q14244 749 aa10.15□□□□□ -0.78
PPFIA2-216ENST00000549396 NSUN6Q8TEA1 469 aaKnown RBP10.15□□□□□ -0.78
PPFIA2-216ENST00000549396 NT5C1BQ96P26 610 aa10.15□□□□□ -0.78
PPFIA2-216ENST00000549396 ZSWIM4Q9H7M6 989 aa10.15□□□□□ -0.78
PPFIA2-216ENST00000549396 CALCOCO1Q9P1Z2 691 aa10.15□□□□□ -0.78
PPFIA2-216ENST00000549396 ZSCAN20P17040 1043 aaPredicted RBP10.15□□□□□ -0.78
PPFIA2-216ENST00000549396 HSPA6P17066 643 aa10.15□□□□□ -0.78
PPFIA2-216ENST00000549396 DYNLL1P63167 89 aaKnown RBP10.15□□□□□ -0.78
PPFIA2-216ENST00000549396 PFKFB3Q16875 520 aaPredicted RBP10.15□□□□□ -0.78
PPFIA2-216ENST00000549396 WHAMMP3Q1A5X7 153 aa10.15□□□□□ -0.78
PPFIA2-216ENST00000549396 OSBPL5Q9H0X9 879 aaPredicted RBP10.15□□□□□ -0.78
PPFIA2-216ENST00000549396 VPS16Q9H269 839 aa10.15□□□□□ -0.78
PPFIA2-216ENST00000549396 CLRN2A0PK11 232 aa10.15□□□□□ -0.79
PPFIA2-216ENST00000549396 ADD1P35611 737 aaKnown RBP10.15□□□□□ -0.79
PPFIA2-216ENST00000549396 SLC10A5Q5PT55 438 aa10.15□□□□□ -0.79
PPFIA2-216ENST00000549396 RUFY4Q6ZNE9 571 aa10.15□□□□□ -0.79
PPFIA2-216ENST00000549396 RNF207Q6ZRF8 634 aa10.15□□□□□ -0.79
PPFIA2-216ENST00000549396 DYMQ7RTS9 669 aa10.15□□□□□ -0.79
PPFIA2-216ENST00000549396 PNMA8AQ86V59 439 aaPredicted RBP10.15□□□□□ -0.79
PPFIA2-216ENST00000549396 SGMS1Q86VZ5 419 aa10.15□□□□□ -0.79
PPFIA2-216ENST00000549396 MAP7D3Q8IWC1 876 aa10.15□□□□□ -0.79
PPFIA2-216ENST00000549396 PROM2Q8N271 834 aa10.15□□□□□ -0.79
PPFIA2-216ENST00000549396 BBS5Q8N3I7 341 aa10.15□□□□□ -0.79
PPFIA2-216ENST00000549396 ANO3Q9BYT9 981 aa10.15□□□□□ -0.79
PPFIA2-216ENST00000549396 HAUS4Q9H6D7 363 aa10.15□□□□□ -0.79
PPFIA2-216ENST00000549396 MAP3K20Q9NYL2 800 aaKnown RBP10.15□□□□□ -0.79
PPFIA2-216ENST00000549396 AMFRQ9UKV5 643 aa10.15□□□□□ -0.79
PPFIA2-216ENST00000549396 PTGS1P23219 599 aa10.14□□□□□ -0.79
PPFIA2-216ENST00000549396 DNA2P51530 1060 aa10.14□□□□□ -0.79
PPFIA2-216ENST00000549396 USP11P51784 963 aa10.14□□□□□ -0.79
PPFIA2-216ENST00000549396 PRKG1Q13976 671 aa10.14□□□□□ -0.79
PPFIA2-216ENST00000549396 RPS6KA1Q15418 735 aa10.14□□□□□ -0.79
PPFIA2-216ENST00000549396 OTUD6BQ8N6M0 293 aa10.14□□□□□ -0.79
PPFIA2-216ENST00000549396 NACA2Q9H009 215 aa10.14□□□□□ -0.79
PPFIA2-216ENST00000549396 ARHGEF28Q8N1W1 1705 aaKnown RBP10.14□□□□□ -0.79
PPFIA2-216ENST00000549396 WDR46O15213 610 aaKnown RBP10.14□□□□□ -0.79
PPFIA2-216ENST00000549396 RFX1P22670 979 aa10.14□□□□□ -0.79
PPFIA2-216ENST00000549396 NFKBIAP25963 317 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms