RNA–Protein interactions for RNA: ENST00000549151.5

RAPGEF3-219, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 3,265 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-219ENST00000549151 VAV2P52735 878 aa13.27□□□□□ -0.29
RAPGEF3-219ENST00000549151 AMPD3Q01432 767 aa13.27□□□□□ -0.29
RAPGEF3-219ENST00000549151 MEA1Q16626 185 aa13.27□□□□□ -0.29
RAPGEF3-219ENST00000549151 CNNM4Q6P4Q7 775 aa13.27□□□□□ -0.29
RAPGEF3-219ENST00000549151 KRT25Q7Z3Z0 450 aa13.27□□□□□ -0.29
RAPGEF3-219ENST00000549151 TMC4Q7Z404 712 aa13.27□□□□□ -0.29
RAPGEF3-219ENST00000549151 TEX11Q8IYF3 940 aa13.27□□□□□ -0.29
RAPGEF3-219ENST00000549151 NOC3LQ8WTT2 800 aaKnown RBP13.27□□□□□ -0.29
RAPGEF3-219ENST00000549151 EIF3CQ99613 913 aaKnown RBP13.27□□□□□ -0.29
RAPGEF3-219ENST00000549151 ARHGAP20Q9P2F6 1191 aa13.27□□□□□ -0.29
RAPGEF3-219ENST00000549151 MYMKA6NI61 221 aa13.26□□□□□ -0.29
RAPGEF3-219ENST00000549151 USP17L5A8MUK1 530 aa13.26□□□□□ -0.29
RAPGEF3-219ENST00000549151 TACC1O75410 805 aa13.26□□□□□ -0.29
RAPGEF3-219ENST00000549151 TDP2O95551 362 aa13.26□□□□□ -0.29
RAPGEF3-219ENST00000549151 SYF2O95926 243 aaKnown RBP13.26□□□□□ -0.29
RAPGEF3-219ENST00000549151 TUBBP07437 444 aa13.26□□□□□ -0.29
RAPGEF3-219ENST00000549151 GNA11P29992 359 aa13.26□□□□□ -0.29
RAPGEF3-219ENST00000549151 BTDP43251 543 aa13.26□□□□□ -0.29
RAPGEF3-219ENST00000549151 TNNI2P48788 182 aa13.26□□□□□ -0.29
RAPGEF3-219ENST00000549151 CDK8P49336 464 aa13.26□□□□□ -0.29
RAPGEF3-219ENST00000549151 KIF11P52732 1056 aa13.26□□□□□ -0.29
RAPGEF3-219ENST00000549151 RNASE9P60153 205 aaKnown RBP13.26□□□□□ -0.29
RAPGEF3-219ENST00000549151 TTC19Q6DKK2 380 aaPredicted RBP13.26□□□□□ -0.29
RAPGEF3-219ENST00000549151 CCDC70Q6NSX1 233 aa13.26□□□□□ -0.29
RAPGEF3-219ENST00000549151 LRRC47Q8N1G4 583 aaKnown RBP13.26□□□□□ -0.29
RAPGEF3-219ENST00000549151 CEP95Q96GE4 821 aa13.26□□□□□ -0.29
RAPGEF3-219ENST00000549151 NDST4Q9H3R1 872 aa13.26□□□□□ -0.29
RAPGEF3-219ENST00000549151 LRRC53A6NM62 1247 aa13.26□□□□□ -0.29
RAPGEF3-219ENST00000549151 PICALMQ13492 652 aa13.26□□□□□ -0.29
RAPGEF3-219ENST00000549151 CALCRLQ16602 461 aa13.26□□□□□ -0.29
RAPGEF3-219ENST00000549151 LRRC1Q9BTT6 524 aa13.26□□□□□ -0.29
RAPGEF3-219ENST00000549151 MMTAG2Q9BU76 263 aaKnown RBP13.26□□□□□ -0.29
RAPGEF3-219ENST00000549151 NYXQ9GZU5 481 aa13.26□□□□□ -0.29
RAPGEF3-219ENST00000549151 GPCPD1Q9NPB8 672 aa13.26□□□□□ -0.29
RAPGEF3-219ENST00000549151 MED4Q9NPJ6 270 aa13.26□□□□□ -0.29
RAPGEF3-219ENST00000549151 DMGDHQ9UI17 866 aaKnown RBP13.26□□□□□ -0.29
RAPGEF3-219ENST00000549151 PCDHA13Q9Y5I0 950 aa13.26□□□□□ -0.29
RAPGEF3-219ENST00000549151 PPARDQ03181 441 aa13.26□□□□□ -0.29
RAPGEF3-219ENST00000549151 CCDC170Q8IYT3 715 aa13.26□□□□□ -0.29
RAPGEF3-219ENST00000549151 NUDT12Q9BQG2 462 aa13.26□□□□□ -0.29
RAPGEF3-219ENST00000549151 ZMYND12Q9H0C1 365 aa13.26□□□□□ -0.29
RAPGEF3-219ENST00000549151 ZHX3Q9H4I2 956 aa13.26□□□□□ -0.29
RAPGEF3-219ENST00000549151 LAD1O00515 517 aa13.25□□□□□ -0.29
RAPGEF3-219ENST00000549151 MAGEA1P43355 309 aa13.25□□□□□ -0.29
RAPGEF3-219ENST00000549151 CACNB1Q02641 598 aaPredicted RBP13.25□□□□□ -0.29
RAPGEF3-219ENST00000549151 RASSF7Q02833 373 aa13.25□□□□□ -0.29
RAPGEF3-219ENST00000549151 GFPT1Q06210 699 aaPredicted RBP13.25□□□□□ -0.29
RAPGEF3-219ENST00000549151 VWA3BQ502W6 1294 aa13.25□□□□□ -0.29
RAPGEF3-219ENST00000549151 TMED8Q6PL24 325 aaPredicted RBP13.25□□□□□ -0.29
RAPGEF3-219ENST00000549151 PAXIP1Q6ZW49 1069 aaPredicted RBP13.25□□□□□ -0.29
RAPGEF3-219ENST00000549151 SRLQ86TD4 932 aa13.25□□□□□ -0.29
RAPGEF3-219ENST00000549151 WDR66Q8TBY9 1149 aa13.25□□□□□ -0.29
RAPGEF3-219ENST00000549151 SNX29Q8TEQ0 813 aa13.25□□□□□ -0.29
RAPGEF3-219ENST00000549151 CDCA7Q9BWT1 371 aaPredicted RBP13.25□□□□□ -0.29
RAPGEF3-219ENST00000549151 POLD4Q9HCU8 107 aa13.25□□□□□ -0.29
RAPGEF3-219ENST00000549151 MKRN1Q9UHC7 482 aaKnown RBP13.25□□□□□ -0.29
RAPGEF3-219ENST00000549151 F8W031 263 aaPredicted RBP13.25□□□□□ -0.29
RAPGEF3-219ENST00000549151 SLC37A4O43826 429 aa13.25□□□□□ -0.29
RAPGEF3-219ENST00000549151 MYL1P05976 194 aa13.25□□□□□ -0.29
RAPGEF3-219ENST00000549151 LRRC31Q6UY01 552 aa13.25□□□□□ -0.29
RAPGEF3-219ENST00000549151 AK8Q96MA6 479 aa13.25□□□□□ -0.29
RAPGEF3-219ENST00000549151 RASSF4Q9H2L5 321 aa13.25□□□□□ -0.29
RAPGEF3-219ENST00000549151 MCM3P25205 808 aa13.24□□□□□ -0.29
RAPGEF3-219ENST00000549151 PRPHP41219 470 aa13.24□□□□□ -0.29
RAPGEF3-219ENST00000549151 APBA1Q02410 837 aa13.24□□□□□ -0.29
RAPGEF3-219ENST00000549151 GALNT17Q6IS24 598 aa13.24□□□□□ -0.29
RAPGEF3-219ENST00000549151 CCNI2Q6ZMN8 369 aaPredicted RBP13.24□□□□□ -0.29
RAPGEF3-219ENST00000549151 AMIGO3Q86WK7 504 aa13.24□□□□□ -0.29
RAPGEF3-219ENST00000549151 NELFCDQ8IXH7 590 aa13.24□□□□□ -0.29
RAPGEF3-219ENST00000549151 RETREG2Q8NC44 543 aa13.24□□□□□ -0.29
RAPGEF3-219ENST00000549151 LARP4BQ92615 738 aaKnown RBP13.24□□□□□ -0.29
RAPGEF3-219ENST00000549151 C7orf25Q9BPX7 421 aa13.24□□□□□ -0.29
RAPGEF3-219ENST00000549151 GOLGA6BA6NDN3 693 aa13.24□□□□□ -0.29
RAPGEF3-219ENST00000549151 IVLP07476 585 aa13.24□□□□□ -0.29
RAPGEF3-219ENST00000549151 GRB10Q13322 594 aa13.24□□□□□ -0.29
RAPGEF3-219ENST00000549151 UBE2SQ16763 222 aa13.24□□□□□ -0.29
RAPGEF3-219ENST00000549151 PTPROQ16827 1216 aa13.24□□□□□ -0.29
RAPGEF3-219ENST00000549151 KCTD19Q17RG1 926 aaPredicted RBP13.24□□□□□ -0.29
RAPGEF3-219ENST00000549151 DAGLBQ8NCG7 672 aa13.24□□□□□ -0.29
RAPGEF3-219ENST00000549151 SNX12Q9UMY4 172 aa13.24□□□□□ -0.29
RAPGEF3-219ENST00000549151 FAM170AA1A519 330 aa13.24□□□□□ -0.29
RAPGEF3-219ENST00000549151 SLC10A5Q5PT55 438 aa13.24□□□□□ -0.29
RAPGEF3-219ENST00000549151 TRIM58Q8NG06 486 aa13.24□□□□□ -0.29
RAPGEF3-219ENST00000549151 MS4A14Q96JA4 679 aa13.24□□□□□ -0.29
RAPGEF3-219ENST00000549151 CUEDC2Q9H467 287 aa13.24□□□□□ -0.29
RAPGEF3-219ENST00000549151 TRAF5O00463 557 aa13.23□□□□□ -0.29
RAPGEF3-219ENST00000549151 TMEM266Q2M3C6 531 aa13.23□□□□□ -0.29
RAPGEF3-219ENST00000549151 CCDC40Q4G0X9 1142 aa13.23□□□□□ -0.29
RAPGEF3-219ENST00000549151 KCNK18Q7Z418 384 aa13.23□□□□□ -0.29
RAPGEF3-219ENST00000549151 ERGIC2Q96RQ1 377 aa13.23□□□□□ -0.29
RAPGEF3-219ENST00000549151 BLOC1S4Q9NUP1 217 aa13.23□□□□□ -0.29
RAPGEF3-219ENST00000549151 GSTO1P78417 241 aa13.23□□□□□ -0.29
RAPGEF3-219ENST00000549151 IQCEQ6IPM2 695 aa13.23□□□□□ -0.29
RAPGEF3-219ENST00000549151 CREG2Q8IUH2 290 aa13.23□□□□□ -0.29
RAPGEF3-219ENST00000549151 ALS2CR12Q96Q35 445 aa13.23□□□□□ -0.29
RAPGEF3-219ENST00000549151 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.23□□□□□ -0.29
RAPGEF3-219ENST00000549151 EHD4Q9H223 541 aa13.23□□□□□ -0.29
RAPGEF3-219ENST00000549151 NARFQ9UHQ1 456 aa13.23□□□□□ -0.29
RAPGEF3-219ENST00000549151 SALL4Q9UJQ4 1053 aa13.23□□□□□ -0.29
RAPGEF3-219ENST00000549151 PLAGL2Q9UPG8 496 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms