RNA–Protein interactions for RNA: ENST00000549100.5

DEPDC4-206, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 501 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-206ENST00000549100 CCNFP41002 786 aa3.15□□□□□ -1.91
DEPDC4-206ENST00000549100 PMS1P54277 932 aaKnown RBP3.15□□□□□ -1.91
DEPDC4-206ENST00000549100 SSPNQ14714 243 aa3.15□□□□□ -1.91
DEPDC4-206ENST00000549100 TCEAL1Q15170 157 aa3.15□□□□□ -1.91
DEPDC4-206ENST00000549100 KIAA1211LQ6NV74 962 aa3.15□□□□□ -1.91
DEPDC4-206ENST00000549100 ZNF662Q6ZS27 426 aa3.15□□□□□ -1.91
DEPDC4-206ENST00000549100 DNAJB8Q8NHS0 232 aa3.15□□□□□ -1.91
DEPDC4-206ENST00000549100 SH3TC2Q8TF17 1288 aa3.15□□□□□ -1.91
DEPDC4-206ENST00000549100 MIPEPQ99797 713 aa3.15□□□□□ -1.91
DEPDC4-206ENST00000549100 BDH2Q9BUT1 245 aa3.15□□□□□ -1.91
DEPDC4-206ENST00000549100 MCOLN1Q9GZU1 580 aa3.15□□□□□ -1.91
DEPDC4-206ENST00000549100 SLITRK6Q9H5Y7 841 aa3.15□□□□□ -1.91
DEPDC4-206ENST00000549100 SUCOQ9UBS9 1254 aaKnown RBP3.15□□□□□ -1.91
DEPDC4-206ENST00000549100 PFDN2Q9UHV9 154 aa3.15□□□□□ -1.91
DEPDC4-206ENST00000549100 ERBINQ96RT1 1412 aa3.15□□□□□ -1.91
DEPDC4-206ENST00000549100 PLXNC1O60486 1568 aa3.15□□□□□ -1.91
DEPDC4-206ENST00000549100 SIGLEC1Q9BZZ2 1709 aa3.15□□□□□ -1.91
DEPDC4-206ENST00000549100 RNF17Q9BXT8 1623 aaKnown RBP3.15□□□□□ -1.91
DEPDC4-206ENST00000549100 CEP152O94986 1710 aa3.14□□□□□ -1.91
DEPDC4-206ENST00000549100 VWDEQ8N2E2 1590 aa3.14□□□□□ -1.91
DEPDC4-206ENST00000549100 PTPRTO14522 1441 aa3.14□□□□□ -1.91
DEPDC4-206ENST00000549100 MYOCOSA0A1B0GUC4 107 aa3.14□□□□□ -1.91
DEPDC4-206ENST00000549100 CBFA2T2O43439 604 aa3.14□□□□□ -1.91
DEPDC4-206ENST00000549100 SUSD5O60279 629 aa3.14□□□□□ -1.91
DEPDC4-206ENST00000549100 CLEC3AO75596 197 aa3.14□□□□□ -1.91
DEPDC4-206ENST00000549100 TP53P04637 393 aaPredicted RBP3.14□□□□□ -1.91
DEPDC4-206ENST00000549100 GDNFP39905 211 aa3.14□□□□□ -1.91
DEPDC4-206ENST00000549100 KRTAP10-9P60411 292 aa3.14□□□□□ -1.91
DEPDC4-206ENST00000549100 SLC7A5Q01650 507 aa3.14□□□□□ -1.91
DEPDC4-206ENST00000549100 IFRD2Q12894 506 aaPredicted RBP3.14□□□□□ -1.91
DEPDC4-206ENST00000549100 NCAPHQ15003 741 aa3.14□□□□□ -1.91
DEPDC4-206ENST00000549100 SLC10A6Q3KNW5 377 aa3.14□□□□□ -1.91
DEPDC4-206ENST00000549100 GNPTABQ3T906 1256 aa3.14□□□□□ -1.91
DEPDC4-206ENST00000549100 MTERF2Q49AM1 385 aa3.14□□□□□ -1.91
DEPDC4-206ENST00000549100 AXDND1Q5T1B0 1012 aaPredicted RBP3.14□□□□□ -1.91
DEPDC4-206ENST00000549100 EGFLAMQ63HQ2 1017 aa3.14□□□□□ -1.91
DEPDC4-206ENST00000549100 DCAF15Q66K64 600 aa3.14□□□□□ -1.91
DEPDC4-206ENST00000549100 LETMD1Q6P1Q0 360 aa3.14□□□□□ -1.91
DEPDC4-206ENST00000549100 CDH24Q86UP0 819 aa3.14□□□□□ -1.91
DEPDC4-206ENST00000549100 MFSD2AQ8NA29 543 aa3.14□□□□□ -1.91
DEPDC4-206ENST00000549100 ST13P5Q8NFI4 369 aaPredicted RBP3.14□□□□□ -1.91
DEPDC4-206ENST00000549100 VWCEQ96DN2 955 aa3.14□□□□□ -1.91
DEPDC4-206ENST00000549100 HEXIM2Q96MH2 286 aaKnown RBP3.14□□□□□ -1.91
DEPDC4-206ENST00000549100 LGR4Q9BXB1 951 aa3.14□□□□□ -1.91
DEPDC4-206ENST00000549100 SUSD2Q9UGT4 822 aa3.14□□□□□ -1.91
DEPDC4-206ENST00000549100 ZMYM5Q9UJ78 669 aa3.14□□□□□ -1.91
DEPDC4-206ENST00000549100 CNOT6Q9ULM6 557 aaKnown RBP3.14□□□□□ -1.91
DEPDC4-206ENST00000549100 KCTD3Q9Y597 815 aa3.14□□□□□ -1.91
DEPDC4-206ENST00000549100 SNX11Q9Y5W9 270 aa3.14□□□□□ -1.91
DEPDC4-206ENST00000549100 KIDINS220Q9ULH0 1771 aa3.14□□□□□ -1.91
DEPDC4-206ENST00000549100 UHRF1BP1LA0JNW5 1464 aa3.14□□□□□ -1.91
DEPDC4-206ENST00000549100 ZFYVE16Q7Z3T8 1539 aa3.14□□□□□ -1.91
DEPDC4-206ENST00000549100 DUOX2Q9NRD8 1548 aa3.14□□□□□ -1.91
DEPDC4-206ENST00000549100 ROCK2O75116 1388 aaKnown RBP3.13□□□□□ -1.91
DEPDC4-206ENST00000549100 SPHKAPQ2M3C7 1700 aa3.13□□□□□ -1.91
DEPDC4-206ENST00000549100 IFT172Q9UG01 1749 aa3.13□□□□□ -1.91
DEPDC4-206ENST00000549100 FRMPD1Q5SYB0 1578 aa3.13□□□□□ -1.91
DEPDC4-206ENST00000549100 LAMC1P11047 1609 aa3.13□□□□□ -1.91
DEPDC4-206ENST00000549100 ABCA9Q8IUA7 1624 aa3.13□□□□□ -1.91
DEPDC4-206ENST00000549100 ABCA6Q8N139 1617 aa3.13□□□□□ -1.91
DEPDC4-206ENST00000549100 ESYT3A0FGR9 886 aa3.13□□□□□ -1.91
DEPDC4-206ENST00000549100 ENPP3O14638 875 aa3.13□□□□□ -1.91
DEPDC4-206ENST00000549100 SHOXO15266 292 aa3.13□□□□□ -1.91
DEPDC4-206ENST00000549100 PRICKLE3O43900 615 aaPredicted RBP3.13□□□□□ -1.91
DEPDC4-206ENST00000549100 EOMESO95936 686 aa3.13□□□□□ -1.91
DEPDC4-206ENST00000549100 EPHX1P07099 455 aa3.13□□□□□ -1.91
DEPDC4-206ENST00000549100 PPP2R1AP30153 589 aa3.13□□□□□ -1.91
DEPDC4-206ENST00000549100 SQSTM1Q13501 440 aa3.13□□□□□ -1.91
DEPDC4-206ENST00000549100 VMACQ2NL98 169 aa3.13□□□□□ -1.91
DEPDC4-206ENST00000549100 NBPF12Q5TAG4 269 aaPredicted RBP3.13□□□□□ -1.91
DEPDC4-206ENST00000549100 EEPD1Q7L9B9 569 aa3.13□□□□□ -1.91
DEPDC4-206ENST00000549100 CCDC146Q8IYE0 955 aa3.13□□□□□ -1.91
DEPDC4-206ENST00000549100 TOP6BLQ8N6T0 577 aa3.13□□□□□ -1.91
DEPDC4-206ENST00000549100 JMYQ8N9B5 988 aa3.13□□□□□ -1.91
DEPDC4-206ENST00000549100 ASB11Q8WXH4 323 aa3.13□□□□□ -1.91
DEPDC4-206ENST00000549100 DHRS1Q96LJ7 313 aa3.13□□□□□ -1.91
DEPDC4-206ENST00000549100 KREMEN1Q96MU8 473 aa3.13□□□□□ -1.91
DEPDC4-206ENST00000549100 HAUS7Q99871 368 aa3.13□□□□□ -1.91
DEPDC4-206ENST00000549100 SGPP1Q9BX95 441 aa3.13□□□□□ -1.91
DEPDC4-206ENST00000549100 KLHL25Q9H0H3 589 aa3.13□□□□□ -1.91
DEPDC4-206ENST00000549100 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.13□□□□□ -1.91
DEPDC4-206ENST00000549100 CARS2Q9HA77 564 aaKnown RBP3.13□□□□□ -1.91
DEPDC4-206ENST00000549100 GCM1Q9NP62 436 aa3.13□□□□□ -1.91
DEPDC4-206ENST00000549100 PRDM10Q9NQV6 1147 aa3.13□□□□□ -1.91
DEPDC4-206ENST00000549100 APEX2Q9UBZ4 518 aa3.13□□□□□ -1.91
DEPDC4-206ENST00000549100 CEP131Q9UPN4 1083 aa3.13□□□□□ -1.91
DEPDC4-206ENST00000549100 ERVK-7P63135 1459 aa3.13□□□□□ -1.91
DEPDC4-206ENST00000549100 KDM2BQ8NHM5 1336 aa3.13□□□□□ -1.91
DEPDC4-206ENST00000549100 ZNF521Q96K83 1311 aa3.13□□□□□ -1.91
DEPDC4-206ENST00000549100 MYBBP1AQ9BQG0 1328 aaKnown RBP3.13□□□□□ -1.91
DEPDC4-206ENST00000549100 INO80Q9ULG1 1556 aaPredicted RBP3.12□□□□□ -1.91
DEPDC4-206ENST00000549100 DEPDC5O75140 1603 aa3.12□□□□□ -1.91
DEPDC4-206ENST00000549100 BLMP54132 1417 aaPredicted RBP3.12□□□□□ -1.91
DEPDC4-206ENST00000549100 SCAPERQ9BY12 1400 aa3.12□□□□□ -1.91
DEPDC4-206ENST00000549100 PPRC1Q5VV67 1664 aaKnown RBP3.12□□□□□ -1.91
DEPDC4-206ENST00000549100 KIF3BO15066 747 aa3.12□□□□□ -1.91
DEPDC4-206ENST00000549100 ADCY3O60266 1144 aa3.12□□□□□ -1.91
DEPDC4-206ENST00000549100 LRRN2O75325 713 aa3.12□□□□□ -1.91
DEPDC4-206ENST00000549100 FBLN1P23142 703 aa3.12□□□□□ -1.91
DEPDC4-206ENST00000549100 RRP1P56182 461 aaKnown RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms