RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 PCDHA9Q9Y5H5 950 aa4.82□□□□□ -1.64
APAF1-208ENST00000549007 MARF1Q9Y4F3 1742 aaKnown RBP4.82□□□□□ -1.64
APAF1-208ENST00000549007 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.82□□□□□ -1.64
APAF1-208ENST00000549007 DYNC1LI2O43237 492 aaPredicted RBP4.82□□□□□ -1.64
APAF1-208ENST00000549007 DLX3O60479 287 aa4.82□□□□□ -1.64
APAF1-208ENST00000549007 ALX3O95076 343 aa4.82□□□□□ -1.64
APAF1-208ENST00000549007 ADH5P11766 374 aa4.82□□□□□ -1.64
APAF1-208ENST00000549007 CD247P20963 164 aa4.82□□□□□ -1.64
APAF1-208ENST00000549007 ARMCX6Q7L4S7 300 aa4.82□□□□□ -1.64
APAF1-208ENST00000549007 MRPL41Q8IXM3 137 aaKnown RBP4.82□□□□□ -1.64
APAF1-208ENST00000549007 SYNPOQ8N3V7 929 aa4.82□□□□□ -1.64
APAF1-208ENST00000549007 KLHL23Q8NBE8 558 aa4.82□□□□□ -1.64
APAF1-208ENST00000549007 BVESQ8NE79 360 aa4.82□□□□□ -1.64
APAF1-208ENST00000549007 EDARADDQ8WWZ3 215 aa4.82□□□□□ -1.64
APAF1-208ENST00000549007 DHRS1Q96LJ7 313 aa4.82□□□□□ -1.64
APAF1-208ENST00000549007 ADAM30Q9UKF2 790 aa4.82□□□□□ -1.64
APAF1-208ENST00000549007 DAGLAQ9Y4D2 1042 aa4.82□□□□□ -1.64
APAF1-208ENST00000549007 MAP3K19Q56UN5 1328 aa4.82□□□□□ -1.64
APAF1-208ENST00000549007 FANCGO15287 622 aa4.82□□□□□ -1.64
APAF1-208ENST00000549007 EYA4O95677 639 aa4.82□□□□□ -1.64
APAF1-208ENST00000549007 NID1P14543 1247 aa4.82□□□□□ -1.64
APAF1-208ENST00000549007 ECI1P42126 302 aa4.82□□□□□ -1.64
APAF1-208ENST00000549007 STAT4Q14765 748 aa4.82□□□□□ -1.64
APAF1-208ENST00000549007 PPP2R5AQ15172 486 aa4.82□□□□□ -1.64
APAF1-208ENST00000549007 NTRK3Q16288 839 aa4.82□□□□□ -1.64
APAF1-208ENST00000549007 MAP9Q49MG5 647 aa4.82□□□□□ -1.64
APAF1-208ENST00000549007 TRAPPC3LQ5T215 181 aa4.82□□□□□ -1.64
APAF1-208ENST00000549007 KCNT2Q6UVM3 1135 aa4.82□□□□□ -1.64
APAF1-208ENST00000549007 EXOC8Q8IYI6 725 aa4.82□□□□□ -1.64
APAF1-208ENST00000549007 GOLGA6L1Q8N7Z2 621 aa4.82□□□□□ -1.64
APAF1-208ENST00000549007 TMEM145Q8NBT3 493 aa4.82□□□□□ -1.64
APAF1-208ENST00000549007 CYB5D2Q8WUJ1 264 aa4.82□□□□□ -1.64
APAF1-208ENST00000549007 TTC9Q92623 222 aa4.82□□□□□ -1.64
APAF1-208ENST00000549007 MIPEPQ99797 713 aa4.82□□□□□ -1.64
APAF1-208ENST00000549007 CGGBP1Q9UFW8 167 aaPredicted RBP4.82□□□□□ -1.64
APAF1-208ENST00000549007 FBXL21Q9UKT6 434 aa4.82□□□□□ -1.64
APAF1-208ENST00000549007 KIF20BQ96Q89 1820 aa4.82□□□□□ -1.64
APAF1-208ENST00000549007 NEMP1O14524 444 aa4.81□□□□□ -1.64
APAF1-208ENST00000549007 WWC2Q6AWC2 1192 aa4.81□□□□□ -1.64
APAF1-208ENST00000549007 ABHD17CQ6PCB6 329 aa4.81□□□□□ -1.64
APAF1-208ENST00000549007 SHISA2Q6UWI4 295 aa4.81□□□□□ -1.64
APAF1-208ENST00000549007 RNF214Q8ND24 703 aa4.81□□□□□ -1.64
APAF1-208ENST00000549007 PPP1R13LQ8WUF5 828 aa4.81□□□□□ -1.64
APAF1-208ENST00000549007 MTFR1LQ9H019 292 aa4.81□□□□□ -1.64
APAF1-208ENST00000549007 EPN3Q9H201 632 aa4.81□□□□□ -1.64
APAF1-208ENST00000549007 VTA1Q9NP79 307 aa4.81□□□□□ -1.64
APAF1-208ENST00000549007 ACTL7BQ9Y614 415 aa4.81□□□□□ -1.64
APAF1-208ENST00000549007 ABCA3Q99758 1704 aa4.81□□□□□ -1.64
APAF1-208ENST00000549007 PHRF1Q9P1Y6 1649 aaKnown RBP4.81□□□□□ -1.64
APAF1-208ENST00000549007 SHPRHQ149N8 1683 aa4.81□□□□□ -1.64
APAF1-208ENST00000549007 CRTAMO95727 393 aa4.81□□□□□ -1.64
APAF1-208ENST00000549007 MAP2K3P46734 347 aa4.81□□□□□ -1.64
APAF1-208ENST00000549007 AMPHP49418 695 aa4.81□□□□□ -1.64
APAF1-208ENST00000549007 AUHQ13825 339 aaKnown RBP4.81□□□□□ -1.64
APAF1-208ENST00000549007 BBS9Q3SYG4 887 aa4.81□□□□□ -1.64
APAF1-208ENST00000549007 NOL9Q5SY16 702 aaKnown RBP4.81□□□□□ -1.64
APAF1-208ENST00000549007 CCDC181Q5TID7 509 aa4.81□□□□□ -1.64
APAF1-208ENST00000549007 DENND5AQ6IQ26 1287 aa4.81□□□□□ -1.64
APAF1-208ENST00000549007 USP53Q70EK8 1073 aa4.81□□□□□ -1.64
APAF1-208ENST00000549007 DDX46Q7L014 1031 aaKnown RBP4.81□□□□□ -1.64
APAF1-208ENST00000549007 SCUBE1Q8IWY4 988 aa4.81□□□□□ -1.64
APAF1-208ENST00000549007 ZNF669Q96BR6 464 aaPredicted RBP4.81□□□□□ -1.64
APAF1-208ENST00000549007 PIDD1Q9HB75 910 aa4.81□□□□□ -1.64
APAF1-208ENST00000549007 GP6Q9HCN6 339 aa4.81□□□□□ -1.64
APAF1-208ENST00000549007 TYW1Q9NV66 732 aaKnown RBP4.81□□□□□ -1.64
APAF1-208ENST00000549007 BTG4Q9NY30 223 aa4.81□□□□□ -1.64
APAF1-208ENST00000549007 AFF2P51816 1311 aa4.81□□□□□ -1.64
APAF1-208ENST00000549007 CNTNAP4Q9C0A0 1308 aa4.81□□□□□ -1.64
APAF1-208ENST00000549007 NFAT5O94916 1531 aa4.81□□□□□ -1.64
APAF1-208ENST00000549007 M0R2C6 588 aa4.81□□□□□ -1.64
APAF1-208ENST00000549007 TSPAN6O43657 245 aa4.81□□□□□ -1.64
APAF1-208ENST00000549007 ASPAP45381 313 aa4.81□□□□□ -1.64
APAF1-208ENST00000549007 ZNF445P59923 1031 aa4.81□□□□□ -1.64
APAF1-208ENST00000549007 SCARA3Q6AZY7 606 aa4.81□□□□□ -1.64
APAF1-208ENST00000549007 GPRC5CQ9NQ84 441 aa4.81□□□□□ -1.64
APAF1-208ENST00000549007 CRYBG1Q9Y4K1 1723 aa4.81□□□□□ -1.64
APAF1-208ENST00000549007 SPATA31A6Q5VVP1 1343 aa4.81□□□□□ -1.64
APAF1-208ENST00000549007 SLIT3O75094 1523 aa4.8□□□□□ -1.64
APAF1-208ENST00000549007 AKAP10O43572 662 aa4.8□□□□□ -1.64
APAF1-208ENST00000549007 LONRF2Q1L5Z9 754 aa4.8□□□□□ -1.64
APAF1-208ENST00000549007 ABCB5Q2M3G0 1257 aa4.8□□□□□ -1.64
APAF1-208ENST00000549007 CCDC184Q52MB2 194 aa4.8□□□□□ -1.64
APAF1-208ENST00000549007 EXOSC6Q5RKV6 272 aaKnown RBP4.8□□□□□ -1.64
APAF1-208ENST00000549007 NBPF12Q5TAG4 269 aaPredicted RBP4.8□□□□□ -1.64
APAF1-208ENST00000549007 PIK3R6Q5UE93 754 aa4.8□□□□□ -1.64
APAF1-208ENST00000549007 SLC6A19Q695T7 634 aa4.8□□□□□ -1.64
APAF1-208ENST00000549007 KIAA1211Q6ZU35 1233 aa4.8□□□□□ -1.64
APAF1-208ENST00000549007 TMC3Q7Z5M5 1100 aa4.8□□□□□ -1.64
APAF1-208ENST00000549007 ARHGEF25Q86VW2 580 aa4.8□□□□□ -1.64
APAF1-208ENST00000549007 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.8□□□□□ -1.64
APAF1-208ENST00000549007 USHBP1Q8N6Y0 703 aa4.8□□□□□ -1.64
APAF1-208ENST00000549007 WNT8BQ93098 351 aa4.8□□□□□ -1.64
APAF1-208ENST00000549007 GFOD1Q9NXC2 390 aa4.8□□□□□ -1.64
APAF1-208ENST00000549007 POLKQ9UBT6 870 aa4.8□□□□□ -1.64
APAF1-208ENST00000549007 COL22A1Q8NFW1 1626 aaPredicted RBP4.8□□□□□ -1.64
APAF1-208ENST00000549007 BRD4O60885 1362 aaPredicted RBP4.8□□□□□ -1.64
APAF1-208ENST00000549007 KRBA1A5PL33 1030 aa4.8□□□□□ -1.64
APAF1-208ENST00000549007 NOP56O00567 594 aaKnown RBP4.8□□□□□ -1.64
APAF1-208ENST00000549007 MTHFSP49914 203 aa4.8□□□□□ -1.64
APAF1-208ENST00000549007 NFE2Q16621 373 aaPredicted RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms