RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 NKX2-4Q9H2Z4 354 aa6.79□□□□□ -1.32
CCDC38-206ENST00000548771 RXFP1Q9HBX9 757 aa6.79□□□□□ -1.32
CCDC38-206ENST00000548771 GPRC5CQ9NQ84 441 aa6.79□□□□□ -1.32
CCDC38-206ENST00000548771 GULP1Q9UBP9 304 aa6.79□□□□□ -1.32
CCDC38-206ENST00000548771 SH3D21A4FU49 640 aa6.78□□□□□ -1.32
CCDC38-206ENST00000548771 SMAD7O15105 426 aaKnown RBP6.78□□□□□ -1.32
CCDC38-206ENST00000548771 THBDP07204 575 aa6.78□□□□□ -1.32
CCDC38-206ENST00000548771 PLS3P13797 630 aa6.78□□□□□ -1.32
CCDC38-206ENST00000548771 SCRN1Q12765 414 aa6.78□□□□□ -1.32
CCDC38-206ENST00000548771 NLGN1Q8N2Q7 840 aa6.78□□□□□ -1.32
CCDC38-206ENST00000548771 NPLOC4Q8TAT6 608 aa6.78□□□□□ -1.32
CCDC38-206ENST00000548771 FRS2Q8WU20 508 aa6.78□□□□□ -1.32
CCDC38-206ENST00000548771 CLEC1BQ9P126 229 aa6.78□□□□□ -1.32
CCDC38-206ENST00000548771 NPHS1O60500 1241 aa6.77□□□□□ -1.33
CCDC38-206ENST00000548771 ZBTB7AO95365 584 aa6.77□□□□□ -1.33
CCDC38-206ENST00000548771 PMLP29590 882 aa6.77□□□□□ -1.33
CCDC38-206ENST00000548771 MC3RP41968 323 aa6.77□□□□□ -1.33
CCDC38-206ENST00000548771 SLC9A5Q14940 896 aa6.77□□□□□ -1.33
CCDC38-206ENST00000548771 INF2Q27J81 1249 aa6.77□□□□□ -1.33
CCDC38-206ENST00000548771 WWC2Q6AWC2 1192 aa6.77□□□□□ -1.33
CCDC38-206ENST00000548771 B3GNT8Q7Z7M8 397 aa6.77□□□□□ -1.33
CCDC38-206ENST00000548771 SP8Q8IXZ3 490 aa6.77□□□□□ -1.33
CCDC38-206ENST00000548771 CRACR2BQ8N4Y2 399 aaPredicted RBP6.77□□□□□ -1.33
CCDC38-206ENST00000548771 KREMEN2Q8NCW0 462 aa6.77□□□□□ -1.33
CCDC38-206ENST00000548771 PEX11GQ96HA9 241 aa6.77□□□□□ -1.33
CCDC38-206ENST00000548771 LGR4Q9BXB1 951 aa6.77□□□□□ -1.33
CCDC38-206ENST00000548771 SCG5P05408 212 aa6.76□□□□□ -1.33
CCDC38-206ENST00000548771 NAT2P11245 290 aa6.76□□□□□ -1.33
CCDC38-206ENST00000548771 SLURP1P55000 103 aa6.76□□□□□ -1.33
CCDC38-206ENST00000548771 TESK1Q15569 626 aa6.76□□□□□ -1.33
CCDC38-206ENST00000548771 C6orf15Q6UXA7 325 aaPredicted RBP6.76□□□□□ -1.33
CCDC38-206ENST00000548771 CABP7Q86V35 215 aa6.76□□□□□ -1.33
CCDC38-206ENST00000548771 Q8N1Y9 231 aa6.76□□□□□ -1.33
CCDC38-206ENST00000548771 ALG3Q92685 438 aa6.76□□□□□ -1.33
CCDC38-206ENST00000548771 BCAS3Q9H6U6 928 aa6.76□□□□□ -1.33
CCDC38-206ENST00000548771 MRVI1Q9Y6F6 885 aa6.76□□□□□ -1.33
CCDC38-206ENST00000548771 TBX1O43435 398 aa6.75□□□□□ -1.33
CCDC38-206ENST00000548771 FGRP09769 529 aa6.75□□□□□ -1.33
CCDC38-206ENST00000548771 ERCC5P28715 1186 aaPredicted RBP6.75□□□□□ -1.33
CCDC38-206ENST00000548771 ETFBP38117 255 aa6.75□□□□□ -1.33
CCDC38-206ENST00000548771 RBM10P98175 930 aaKnown RBP6.75□□□□□ -1.33
CCDC38-206ENST00000548771 CACNB2Q08289 660 aaPredicted RBP6.75□□□□□ -1.33
CCDC38-206ENST00000548771 MRM1Q6IN84 353 aaKnown RBP6.75□□□□□ -1.33
CCDC38-206ENST00000548771 LIPIQ6XZB0 460 aa6.75□□□□□ -1.33
CCDC38-206ENST00000548771 FAM178BQ8IXR5 827 aa6.75□□□□□ -1.33
CCDC38-206ENST00000548771 MICAL1Q8TDZ2 1067 aa6.75□□□□□ -1.33
CCDC38-206ENST00000548771 ZNF526Q8TF50 670 aaPredicted RBP6.75□□□□□ -1.33
CCDC38-206ENST00000548771 CAPN10Q9HC96 672 aa6.75□□□□□ -1.33
CCDC38-206ENST00000548771 ACTR10Q9NZ32 417 aa6.75□□□□□ -1.33
CCDC38-206ENST00000548771 PRKAG3Q9UGI9 489 aa6.75□□□□□ -1.33
CCDC38-206ENST00000548771 DBR1Q9UK59 544 aaKnown RBP6.75□□□□□ -1.33
CCDC38-206ENST00000548771 NUDT5Q9UKK9 219 aa6.75□□□□□ -1.33
CCDC38-206ENST00000548771 NOP56O00567 594 aaKnown RBP6.74□□□□□ -1.33
CCDC38-206ENST00000548771 FUCA1P04066 466 aa6.74□□□□□ -1.33
CCDC38-206ENST00000548771 NTRK1P04629 796 aa6.74□□□□□ -1.33
CCDC38-206ENST00000548771 ITGAVP06756 1048 aa6.74□□□□□ -1.33
CCDC38-206ENST00000548771 INSRRP14616 1297 aa6.74□□□□□ -1.33
CCDC38-206ENST00000548771 HOXC12P31275 282 aa6.74□□□□□ -1.33
CCDC38-206ENST00000548771 TNNI3KQ59H18 835 aa6.74□□□□□ -1.33
CCDC38-206ENST00000548771 FRMD5Q7Z6J6 570 aa6.74□□□□□ -1.33
CCDC38-206ENST00000548771 VPS37DQ86XT2 251 aa6.74□□□□□ -1.33
CCDC38-206ENST00000548771 CCDC103Q8IW40 242 aa6.74□□□□□ -1.33
CCDC38-206ENST00000548771 NOX5Q96PH1 765 aa6.74□□□□□ -1.33
CCDC38-206ENST00000548771 TINF2Q9BSI4 451 aa6.74□□□□□ -1.33
CCDC38-206ENST00000548771 SPATA6Q9NWH7 488 aaPredicted RBP6.74□□□□□ -1.33
CCDC38-206ENST00000548771 TMEFF2Q9UIK5 374 aaPredicted RBP6.74□□□□□ -1.33
CCDC38-206ENST00000548771 SIT1Q9Y3P8 196 aa6.74□□□□□ -1.33
CCDC38-206ENST00000548771 PMF1-BGLAPU3KQ54 211 aa6.74□□□□□ -1.33
CCDC38-206ENST00000548771 SGSM2O43147 1006 aa6.73□□□□□ -1.33
CCDC38-206ENST00000548771 SUSD5O60279 629 aa6.73□□□□□ -1.33
CCDC38-206ENST00000548771 TCF3P15923 654 aa6.73□□□□□ -1.33
CCDC38-206ENST00000548771 ZXDCQ2QGD7 858 aaPredicted RBP6.73□□□□□ -1.33
CCDC38-206ENST00000548771 ZFYVE27Q5T4F4 411 aa6.73□□□□□ -1.33
CCDC38-206ENST00000548771 E4F1Q66K89 784 aaPredicted RBP6.73□□□□□ -1.33
CCDC38-206ENST00000548771 IQCEQ6IPM2 695 aa6.73□□□□□ -1.33
CCDC38-206ENST00000548771 ZNF227Q86WZ6 799 aa6.73□□□□□ -1.33
CCDC38-206ENST00000548771 ADGRG2Q8IZP9 1017 aa6.73□□□□□ -1.33
CCDC38-206ENST00000548771 LINC00482Q8N8I6 264 aa6.73□□□□□ -1.33
CCDC38-206ENST00000548771 TEPSINQ96N21 525 aa6.73□□□□□ -1.33
CCDC38-206ENST00000548771 X6R8D5 127 aa6.73□□□□□ -1.33
CCDC38-206ENST00000548771 A0A1B0GTL3 188 aa6.72□□□□□ -1.33
CCDC38-206ENST00000548771 B2RBV5 119 aa6.72□□□□□ -1.33
CCDC38-206ENST00000548771 KCNC1P48547 511 aa6.72□□□□□ -1.33
CCDC38-206ENST00000548771 PUM1Q14671 1186 aaKnown RBP eCLIP6.72□□□□□ -1.33
CCDC38-206ENST00000548771 SF1Q15637 639 aaKnown RBP6.72□□□□□ -1.33
CCDC38-206ENST00000548771 MIB1Q86YT6 1006 aa6.72□□□□□ -1.33
CCDC38-206ENST00000548771 RIOX2Q8IUF8 465 aa6.72□□□□□ -1.33
CCDC38-206ENST00000548771 SMARCC2Q8TAQ2 1214 aa6.72□□□□□ -1.33
CCDC38-206ENST00000548771 BTN2A2Q8WVV5 523 aa6.72□□□□□ -1.33
CCDC38-206ENST00000548771 ZNF408Q9H9D4 720 aa6.72□□□□□ -1.33
CCDC38-206ENST00000548771 FAN1Q9Y2M0 1017 aa6.72□□□□□ -1.33
CCDC38-206ENST00000548771 SSBP05455 408 aaKnown RBP eCLIP6.71□□□□□ -1.34
CCDC38-206ENST00000548771 SLC6A11P48066 632 aa6.71□□□□□ -1.34
CCDC38-206ENST00000548771 EFEMP1Q12805 493 aa6.71□□□□□ -1.34
CCDC38-206ENST00000548771 DENND5AQ6IQ26 1287 aa6.71□□□□□ -1.34
CCDC38-206ENST00000548771 MCF2L2Q86YR7 1114 aa6.71□□□□□ -1.34
CCDC38-206ENST00000548771 TEX2Q8IWB9 1127 aa6.71□□□□□ -1.34
CCDC38-206ENST00000548771 USP33Q8TEY7 942 aa6.71□□□□□ -1.34
CCDC38-206ENST00000548771 C1orf159Q96HA4 380 aa6.71□□□□□ -1.34
CCDC38-206ENST00000548771 GMLQ99445 158 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms