RNA–Protein interactions for RNA: ENST00000548313.5

DEPDC4-205, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-205ENST00000548313 DCAF4Q8WV16 495 aa6.26□□□□□ -1.41
DEPDC4-205ENST00000548313 DIO2Q92813 273 aa6.26□□□□□ -1.41
DEPDC4-205ENST00000548313 PLCD4Q9BRC7 762 aa6.26□□□□□ -1.41
DEPDC4-205ENST00000548313 DHRS4Q9BTZ2 278 aa6.26□□□□□ -1.41
DEPDC4-205ENST00000548313 SLC6A17Q9H1V8 727 aa6.26□□□□□ -1.41
DEPDC4-205ENST00000548313 PDLIM7Q9NR12 457 aa6.26□□□□□ -1.41
DEPDC4-205ENST00000548313 IMPACTQ9P2X3 320 aa6.26□□□□□ -1.41
DEPDC4-205ENST00000548313 NPFFR2Q9Y5X5 522 aa6.26□□□□□ -1.41
DEPDC4-205ENST00000548313 C7orf72A4D263 438 aa6.25□□□□□ -1.41
DEPDC4-205ENST00000548313 NPIPB6E9PJ23 425 aa6.25□□□□□ -1.41
DEPDC4-205ENST00000548313 GTF2A2P52657 109 aa6.25□□□□□ -1.41
DEPDC4-205ENST00000548313 SUMO1P63165 101 aaKnown RBP6.25□□□□□ -1.41
DEPDC4-205ENST00000548313 MVKQ03426 396 aa6.25□□□□□ -1.41
DEPDC4-205ENST00000548313 PRSS53Q2L4Q9 553 aa6.25□□□□□ -1.41
DEPDC4-205ENST00000548313 YOD1Q5VVQ6 348 aaPredicted RBP6.25□□□□□ -1.41
DEPDC4-205ENST00000548313 DENND5AQ6IQ26 1287 aa6.25□□□□□ -1.41
DEPDC4-205ENST00000548313 IRF2BP1Q8IU81 584 aa6.25□□□□□ -1.41
DEPDC4-205ENST00000548313 NUP43Q8NFH3 380 aa6.25□□□□□ -1.41
DEPDC4-205ENST00000548313 KRTAP9-3Q9BYQ3 159 aa6.25□□□□□ -1.41
DEPDC4-205ENST00000548313 A0A1W2PQJ5 194 aa6.24□□□□□ -1.41
DEPDC4-205ENST00000548313 CTSWP56202 376 aa6.24□□□□□ -1.41
DEPDC4-205ENST00000548313 FAM209AQ5JX71 171 aa6.24□□□□□ -1.41
DEPDC4-205ENST00000548313 CIAPIN1Q6FI81 312 aa6.24□□□□□ -1.41
DEPDC4-205ENST00000548313 CCDC103Q8IW40 242 aa6.24□□□□□ -1.41
DEPDC4-205ENST00000548313 DIRC2Q96SL1 478 aa6.24□□□□□ -1.41
DEPDC4-205ENST00000548313 ZFYVE21Q9BQ24 234 aa6.24□□□□□ -1.41
DEPDC4-205ENST00000548313 NSUN3Q9H649 340 aaKnown RBP6.24□□□□□ -1.41
DEPDC4-205ENST00000548313 GPR27Q9NS67 375 aa6.24□□□□□ -1.41
DEPDC4-205ENST00000548313 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.24□□□□□ -1.41
DEPDC4-205ENST00000548313 TIMM13Q9Y5L4 95 aaPredicted RBP6.24□□□□□ -1.41
DEPDC4-205ENST00000548313 ARNTLO00327 626 aa6.23□□□□□ -1.41
DEPDC4-205ENST00000548313 MYO1BO43795 1136 aa6.23□□□□□ -1.41
DEPDC4-205ENST00000548313 IGSF3O75054 1194 aa6.23□□□□□ -1.41
DEPDC4-205ENST00000548313 EFEMP2O95967 443 aa6.23□□□□□ -1.41
DEPDC4-205ENST00000548313 INHBBP09529 407 aa6.23□□□□□ -1.41
DEPDC4-205ENST00000548313 ERVFRD-1P60508 538 aa6.23□□□□□ -1.41
DEPDC4-205ENST00000548313 RPL11P62913 178 aaKnown RBP6.23□□□□□ -1.41
DEPDC4-205ENST00000548313 KCNA10Q16322 511 aa6.23□□□□□ -1.41
DEPDC4-205ENST00000548313 INF2Q27J81 1249 aa6.23□□□□□ -1.41
DEPDC4-205ENST00000548313 FOXB2Q5VYV0 432 aa6.23□□□□□ -1.41
DEPDC4-205ENST00000548313 LZTR1Q8N653 840 aa6.23□□□□□ -1.41
DEPDC4-205ENST00000548313 RCBTB1Q8NDN9 531 aa6.23□□□□□ -1.41
DEPDC4-205ENST00000548313 KISS1RQ969F8 398 aaPredicted RBP6.23□□□□□ -1.41
DEPDC4-205ENST00000548313 INTS4Q96HW7 963 aaKnown RBP6.23□□□□□ -1.41
DEPDC4-205ENST00000548313 EXOC2Q96KP1 924 aa6.23□□□□□ -1.41
DEPDC4-205ENST00000548313 TMEFF2Q9UIK5 374 aaPredicted RBP6.23□□□□□ -1.41
DEPDC4-205ENST00000548313 MRPS23Q9Y3D9 190 aaKnown RBP6.23□□□□□ -1.41
DEPDC4-205ENST00000548313 TCAF2A6NFQ2 919 aa6.22□□□□□ -1.41
DEPDC4-205ENST00000548313 ABLIM1O14639 778 aa6.22□□□□□ -1.41
DEPDC4-205ENST00000548313 MPOP05164 745 aa6.22□□□□□ -1.41
DEPDC4-205ENST00000548313 TMEM62Q0P6H9 643 aa6.22□□□□□ -1.41
DEPDC4-205ENST00000548313 MBLAC2Q68D91 279 aa6.22□□□□□ -1.41
DEPDC4-205ENST00000548313 STYK1Q6J9G0 422 aa6.22□□□□□ -1.41
DEPDC4-205ENST00000548313 USP53Q70EK8 1073 aa6.22□□□□□ -1.41
DEPDC4-205ENST00000548313 MAMDC2Q7Z304 686 aaPredicted RBP6.22□□□□□ -1.41
DEPDC4-205ENST00000548313 SIRT2Q8IXJ6 389 aa6.22□□□□□ -1.41
DEPDC4-205ENST00000548313 SH3TC2Q8TF17 1288 aa6.22□□□□□ -1.41
DEPDC4-205ENST00000548313 PTPRN2Q92932 1015 aa6.22□□□□□ -1.41
DEPDC4-205ENST00000548313 RNPC3Q96LT9 517 aaKnown RBP6.22□□□□□ -1.41
DEPDC4-205ENST00000548313 MTA3Q9BTC8 594 aa6.22□□□□□ -1.41
DEPDC4-205ENST00000548313 CD320Q9NPF0 282 aa6.22□□□□□ -1.41
DEPDC4-205ENST00000548313 PTCH2Q9Y6C5 1203 aa6.22□□□□□ -1.41
DEPDC4-205ENST00000548313 OR14I1A6ND48 311 aa6.21□□□□□ -1.42
DEPDC4-205ENST00000548313 HRKO00198 91 aa6.21□□□□□ -1.42
DEPDC4-205ENST00000548313 SRGAP3O43295 1099 aa6.21□□□□□ -1.42
DEPDC4-205ENST00000548313 PPP1R11O60927 126 aaPredicted RBP6.21□□□□□ -1.42
DEPDC4-205ENST00000548313 MSL3P1P0C860 447 aa6.21□□□□□ -1.42
DEPDC4-205ENST00000548313 MED14OSP0DP75 135 aa6.21□□□□□ -1.42
DEPDC4-205ENST00000548313 NAT1P18440 290 aa6.21□□□□□ -1.42
DEPDC4-205ENST00000548313 GABREP78334 506 aa6.21□□□□□ -1.42
DEPDC4-205ENST00000548313 LSAMPQ13449 338 aa6.21□□□□□ -1.42
DEPDC4-205ENST00000548313 KIR3DS1Q14943 382 aa6.21□□□□□ -1.42
DEPDC4-205ENST00000548313 NR1I3Q14994 352 aa6.21□□□□□ -1.42
DEPDC4-205ENST00000548313 NTRK3Q16288 839 aa6.21□□□□□ -1.42
DEPDC4-205ENST00000548313 ATG14Q6ZNE5 492 aa6.21□□□□□ -1.42
DEPDC4-205ENST00000548313 CABP7Q86V35 215 aa6.21□□□□□ -1.42
DEPDC4-205ENST00000548313 SYNPOQ8N3V7 929 aa6.21□□□□□ -1.42
DEPDC4-205ENST00000548313 USP33Q8TEY7 942 aa6.21□□□□□ -1.42
DEPDC4-205ENST00000548313 DPF3Q92784 378 aa6.21□□□□□ -1.42
DEPDC4-205ENST00000548313 PHF20Q9BVI0 1012 aa6.21□□□□□ -1.42
DEPDC4-205ENST00000548313 EPB41L4BQ9H329 900 aa6.21□□□□□ -1.42
DEPDC4-205ENST00000548313 TNFRSF12AQ9NP84 129 aa6.21□□□□□ -1.42
DEPDC4-205ENST00000548313 DCP1AQ9NPI6 582 aaPredicted RBP6.21□□□□□ -1.42
DEPDC4-205ENST00000548313 GULP1Q9UBP9 304 aa6.21□□□□□ -1.42
DEPDC4-205ENST00000548313 H7BY64 318 aa6.2□□□□□ -1.42
DEPDC4-205ENST00000548313 AQP7O14520 342 aa6.2□□□□□ -1.42
DEPDC4-205ENST00000548313 GLDCP23378 1020 aa6.2□□□□□ -1.42
DEPDC4-205ENST00000548313 PDE6BP35913 854 aa6.2□□□□□ -1.42
DEPDC4-205ENST00000548313 GALK1P51570 392 aa6.2□□□□□ -1.42
DEPDC4-205ENST00000548313 SQSTM1Q13501 440 aa6.2□□□□□ -1.42
DEPDC4-205ENST00000548313 CBX2Q14781 532 aaPredicted RBP6.2□□□□□ -1.42
DEPDC4-205ENST00000548313 ADGRF1Q5T601 910 aa6.2□□□□□ -1.42
DEPDC4-205ENST00000548313 OLFML2BQ68BL8 750 aa6.2□□□□□ -1.42
DEPDC4-205ENST00000548313 BICRALQ6AI39 1079 aa6.2□□□□□ -1.42
DEPDC4-205ENST00000548313 IFNL3Q8IZI9 196 aa6.2□□□□□ -1.42
DEPDC4-205ENST00000548313 Q8N1Y9 231 aa6.2□□□□□ -1.42
DEPDC4-205ENST00000548313 PLEKHO2Q8TD55 490 aa6.2□□□□□ -1.42
DEPDC4-205ENST00000548313 ZNF552Q9H707 407 aaPredicted RBP6.2□□□□□ -1.42
DEPDC4-205ENST00000548313 TMEM260Q9NX78 707 aa6.2□□□□□ -1.42
DEPDC4-205ENST00000548313 PCDHA2Q9Y5H9 948 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms