RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 KCNMB3Q9NPA1 279 aa23.52■■□□□ 1.36
RITA1-201ENST00000548278 STK17AQ9UEE5 414 aa23.52■■□□□ 1.36
RITA1-201ENST00000548278 FOSP01100 380 aaPredicted RBP23.52■■□□□ 1.35
RITA1-201ENST00000548278 SAMD7Q7Z3H4 446 aa23.52■■□□□ 1.35
RITA1-201ENST00000548278 ADSSL1Q8N142 457 aa23.52■■□□□ 1.35
RITA1-201ENST00000548278 CHURC1Q8WUH1 139 aa23.52■■□□□ 1.35
RITA1-201ENST00000548278 GJA10Q969M2 543 aa23.52■■□□□ 1.35
RITA1-201ENST00000548278 RANBP17Q9H2T7 1088 aaKnown RBP23.52■■□□□ 1.35
RITA1-201ENST00000548278 A0A1B0GTH6 734 aa23.51■■□□□ 1.35
RITA1-201ENST00000548278 PIK3CDO00329 1044 aa23.51■■□□□ 1.35
RITA1-201ENST00000548278 AMPD3Q01432 767 aa23.51■■□□□ 1.35
RITA1-201ENST00000548278 NR1I3Q14994 352 aa23.51■■□□□ 1.35
RITA1-201ENST00000548278 ZYXQ15942 572 aaKnown RBP23.51■■□□□ 1.35
RITA1-201ENST00000548278 TMEM119Q4V9L6 283 aa23.51■■□□□ 1.35
RITA1-201ENST00000548278 KRT79Q5XKE5 535 aa23.51■■□□□ 1.35
RITA1-201ENST00000548278 CCDC84Q86UT8 332 aaPredicted RBP23.51■■□□□ 1.35
RITA1-201ENST00000548278 GIMAP8Q8ND71 665 aaPredicted RBP23.51■■□□□ 1.35
RITA1-201ENST00000548278 SNX29Q8TEQ0 813 aa23.51■■□□□ 1.35
RITA1-201ENST00000548278 CNOT7Q9UIV1 285 aaKnown RBP23.51■■□□□ 1.35
RITA1-201ENST00000548278 PCDHA12Q9UN75 941 aa23.51■■□□□ 1.35
RITA1-201ENST00000548278 ASTN2O75129 1339 aaPredicted RBP23.5■■□□□ 1.35
RITA1-201ENST00000548278 SFPQP23246 707 aaKnown RBP eCLIP23.5■■□□□ 1.35
RITA1-201ENST00000548278 SREBF1P36956 1147 aa23.5■■□□□ 1.35
RITA1-201ENST00000548278 TRAF1Q13077 416 aa23.5■■□□□ 1.35
RITA1-201ENST00000548278 GJA3Q9Y6H8 435 aa23.5■■□□□ 1.35
RITA1-201ENST00000548278 SPDYE3A6NKU9 549 aa23.5■■□□□ 1.35
RITA1-201ENST00000548278 MARCH6O60337 910 aa23.5■■□□□ 1.35
RITA1-201ENST00000548278 COBLO75128 1261 aa23.5■■□□□ 1.35
RITA1-201ENST00000548278 PTPN21Q16825 1174 aa23.5■■□□□ 1.35
RITA1-201ENST00000548278 TEX2Q8IWB9 1127 aa23.5■■□□□ 1.35
RITA1-201ENST00000548278 CDK5RAP3Q96JB5 506 aa23.5■■□□□ 1.35
RITA1-201ENST00000548278 MAPK8IP1Q9UQF2 711 aa23.5■■□□□ 1.35
RITA1-201ENST00000548278 TBC1D10BQ4KMP7 808 aaPredicted RBP23.49■■□□□ 1.35
RITA1-201ENST00000548278 SV2BQ7L1I2 683 aa23.49■■□□□ 1.35
RITA1-201ENST00000548278 FAM160B2Q86V87 743 aa23.49■■□□□ 1.35
RITA1-201ENST00000548278 NLGN2Q8NFZ4 835 aa23.49■■□□□ 1.35
RITA1-201ENST00000548278 KIFC2Q96AC6 838 aa23.49■■□□□ 1.35
RITA1-201ENST00000548278 R3HCC1Q9Y3T6 440 aaKnown RBP23.49■■□□□ 1.35
RITA1-201ENST00000548278 PSDA5PKW4 1024 aaPredicted RBP23.48■■□□□ 1.35
RITA1-201ENST00000548278 HOXA13P31271 388 aaPredicted RBP23.48■■□□□ 1.35
RITA1-201ENST00000548278 ASIC1P78348 528 aa23.48■■□□□ 1.35
RITA1-201ENST00000548278 TBX2Q13207 712 aaPredicted RBP23.48■■□□□ 1.35
RITA1-201ENST00000548278 DNTTIP2Q5QJE6 756 aaKnown RBP23.48■■□□□ 1.35
RITA1-201ENST00000548278 LARP4BQ92615 738 aaKnown RBP23.48■■□□□ 1.35
RITA1-201ENST00000548278 RAD54LQ92698 747 aa23.48■■□□□ 1.35
RITA1-201ENST00000548278 FEM1BQ9UK73 627 aa23.48■■□□□ 1.35
RITA1-201ENST00000548278 MCM6Q14566 821 aa23.48■■□□□ 1.35
RITA1-201ENST00000548278 ECM1Q16610 540 aa23.48■■□□□ 1.35
RITA1-201ENST00000548278 TPD52L1Q16890 204 aaPredicted RBP23.48■■□□□ 1.35
RITA1-201ENST00000548278 Q4G0T1 1027 aa23.48■■□□□ 1.35
RITA1-201ENST00000548278 ZNF341Q9BYN7 854 aa23.48■■□□□ 1.35
RITA1-201ENST00000548278 HACL1Q9UJ83 578 aa23.48■■□□□ 1.35
RITA1-201ENST00000548278 HYIQ5T013 277 aa23.47■■□□□ 1.35
RITA1-201ENST00000548278 CCDC174Q6PII3 467 aa23.47■■□□□ 1.35
RITA1-201ENST00000548278 KCNK18Q7Z418 384 aa23.47■■□□□ 1.35
RITA1-201ENST00000548278 ETNPPLQ8TBG4 499 aa23.47■■□□□ 1.35
RITA1-201ENST00000548278 LENG9Q96B70 501 aa23.47■■□□□ 1.35
RITA1-201ENST00000548278 ADD3Q9UEY8 706 aaKnown RBP23.47■■□□□ 1.35
RITA1-201ENST00000548278 ZNF541Q9H0D2 1346 aa23.47■■□□□ 1.35
RITA1-201ENST00000548278 CIITAP33076 1130 aa23.47■■□□□ 1.35
RITA1-201ENST00000548278 SPECC1LQ69YQ0 1117 aa23.47■■□□□ 1.35
RITA1-201ENST00000548278 SLFN12Q8IYM2 578 aa23.47■■□□□ 1.35
RITA1-201ENST00000548278 CCDC47Q96A33 483 aaKnown RBP23.47■■□□□ 1.35
RITA1-201ENST00000548278 CTAGE1Q96RT6 745 aa23.47■■□□□ 1.35
RITA1-201ENST00000548278 EXOC1Q9NV70 894 aa23.47■■□□□ 1.35
RITA1-201ENST00000548278 FBXO28Q9NVF7 368 aa23.47■■□□□ 1.35
RITA1-201ENST00000548278 MYMKA6NI61 221 aa23.46■■□□□ 1.35
RITA1-201ENST00000548278 PDE4DQ08499 809 aa23.46■■□□□ 1.35
RITA1-201ENST00000548278 KIF4BQ2VIQ3 1234 aa23.46■■□□□ 1.35
RITA1-201ENST00000548278 PRR16Q569H4 304 aa23.46■■□□□ 1.35
RITA1-201ENST00000548278 DEFB129Q9H1M3 183 aa23.46■■□□□ 1.35
RITA1-201ENST00000548278 FAM86B1E9PN63 330 aa23.45■■□□□ 1.35
RITA1-201ENST00000548278 TBX3O15119 743 aa23.45■■□□□ 1.35
RITA1-201ENST00000548278 CYP3A4P08684 503 aa23.45■■□□□ 1.35
RITA1-201ENST00000548278 FAM86B2P0C5J1 330 aa23.45■■□□□ 1.35
RITA1-201ENST00000548278 TERF1P54274 439 aa23.45■■□□□ 1.35
RITA1-201ENST00000548278 STIM1Q13586 685 aa23.45■■□□□ 1.35
RITA1-201ENST00000548278 UIMC1Q96RL1 719 aa23.45■■□□□ 1.35
RITA1-201ENST00000548278 FEZ1Q99689 392 aa23.45■■□□□ 1.35
RITA1-201ENST00000548278 KCND1Q9NSA2 647 aa23.45■■□□□ 1.35
RITA1-201ENST00000548278 GINM1Q9NU53 330 aa23.45■■□□□ 1.35
RITA1-201ENST00000548278 LIMA1Q9UHB6 759 aaKnown RBP23.45■■□□□ 1.35
RITA1-201ENST00000548278 LRRC10BA6NIK2 292 aa23.45■■□□□ 1.34
RITA1-201ENST00000548278 H7C1D1 291 aa23.45■■□□□ 1.34
RITA1-201ENST00000548278 TEX33O43247 280 aa23.45■■□□□ 1.34
RITA1-201ENST00000548278 PMS1P54277 932 aaKnown RBP23.45■■□□□ 1.34
RITA1-201ENST00000548278 CNNM4Q6P4Q7 775 aa23.45■■□□□ 1.34
RITA1-201ENST00000548278 GTPBP4Q9BZE4 634 aaKnown RBP23.45■■□□□ 1.34
RITA1-201ENST00000548278 TRIM49BA6NDI0 452 aa23.44■■□□□ 1.34
RITA1-201ENST00000548278 PSMA7O14818 248 aa23.44■■□□□ 1.34
RITA1-201ENST00000548278 SLC26A4O43511 780 aa23.44■■□□□ 1.34
RITA1-201ENST00000548278 CTNND1O60716 968 aaKnown RBP23.44■■□□□ 1.34
RITA1-201ENST00000548278 STK4Q13043 487 aa23.44■■□□□ 1.34
RITA1-201ENST00000548278 TBC1D5Q92609 795 aa23.44■■□□□ 1.34
RITA1-201ENST00000548278 DHTKD1Q96HY7 919 aaPredicted RBP23.44■■□□□ 1.34
RITA1-201ENST00000548278 TMX1Q9H3N1 280 aa23.44■■□□□ 1.34
RITA1-201ENST00000548278 KDM3AQ9Y4C1 1321 aa23.44■■□□□ 1.34
RITA1-201ENST00000548278 INPP5BP32019 993 aa23.44■■□□□ 1.34
RITA1-201ENST00000548278 CCT6AP40227 531 aaKnown RBP23.44■■□□□ 1.34
RITA1-201ENST00000548278 SPAG1Q07617 926 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms