RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 TICAM2Q86XR7 235 aa23.57■■□□□ 1.36
GATC-202ENST00000548171 ZBTB47Q9UFB7 747 aaPredicted RBP23.57■■□□□ 1.36
GATC-202ENST00000548171 PCDHB15Q9Y5E8 787 aa23.57■■□□□ 1.36
GATC-202ENST00000548171 TET1Q8NFU7 2136 aa23.57■■□□□ 1.36
GATC-202ENST00000548171 SALL3Q9BXA9 1300 aa23.57■■□□□ 1.36
GATC-202ENST00000548171 IQCF3P0C7M6 154 aa23.56■■□□□ 1.36
GATC-202ENST00000548171 RPS6P62753 249 aaKnown RBP23.56■■□□□ 1.36
GATC-202ENST00000548171 RRP12Q5JTH9 1297 aaKnown RBP23.56■■□□□ 1.36
GATC-202ENST00000548171 TTC14Q96N46 770 aa23.56■■□□□ 1.36
GATC-202ENST00000548171 KIAA1217Q5T5P2 1943 aa23.56■■□□□ 1.36
GATC-202ENST00000548171 ZMYM6O95789 1325 aa23.56■■□□□ 1.36
GATC-202ENST00000548171 FGAP02671 866 aa23.55■■□□□ 1.36
GATC-202ENST00000548171 TXNP10599 105 aaKnown RBP23.55■■□□□ 1.36
GATC-202ENST00000548171 ZNF543Q08ER8 600 aa23.55■■□□□ 1.36
GATC-202ENST00000548171 SKIV2LQ15477 1246 aaKnown RBP23.55■■□□□ 1.36
GATC-202ENST00000548171 MAF1Q9H063 256 aa23.55■■□□□ 1.36
GATC-202ENST00000548171 NOD1Q9Y239 953 aa23.55■■□□□ 1.36
GATC-202ENST00000548171 MTCH2Q9Y6C9 303 aa23.55■■□□□ 1.36
GATC-202ENST00000548171 MYH6P13533 1939 aa23.55■■□□□ 1.36
GATC-202ENST00000548171 KIF28PB7ZC32 967 aa23.54■■□□□ 1.36
GATC-202ENST00000548171 BAIAP3O94812 1187 aa23.54■■□□□ 1.36
GATC-202ENST00000548171 PCP11498 1178 aaKnown RBP23.54■■□□□ 1.36
GATC-202ENST00000548171 TFF2Q03403 129 aa23.54■■□□□ 1.36
GATC-202ENST00000548171 CCDC155Q8N6L0 562 aa23.54■■□□□ 1.36
GATC-202ENST00000548171 RGS22Q8NE09 1264 aa23.54■■□□□ 1.36
GATC-202ENST00000548171 C1QTNF1Q9BXJ1 281 aa23.54■■□□□ 1.36
GATC-202ENST00000548171 FTOQ9C0B1 505 aaKnown RBP eCLIP23.54■■□□□ 1.36
GATC-202ENST00000548171 PTPRSQ13332 1948 aa23.53■■□□□ 1.36
GATC-202ENST00000548171 SNHG28P0DPA3 235 aa23.53■■□□□ 1.36
GATC-202ENST00000548171 MCMDC2Q4G0Z9 681 aa23.53■■□□□ 1.36
GATC-202ENST00000548171 HERC6Q8IVU3 1022 aa23.53■■□□□ 1.36
GATC-202ENST00000548171 COG5Q9UP83 839 aa23.53■■□□□ 1.36
GATC-202ENST00000548171 TAP1Q03518 808 aa23.52■■□□□ 1.36
GATC-202ENST00000548171 CAGE1Q8TC20 777 aa23.52■■□□□ 1.36
GATC-202ENST00000548171 RFXAPO00287 272 aa23.51■■□□□ 1.35
GATC-202ENST00000548171 GPATCH4Q5T3I0 446 aaKnown RBP23.51■■□□□ 1.35
GATC-202ENST00000548171 MFSD6Q6ZSS7 791 aa23.51■■□□□ 1.35
GATC-202ENST00000548171 COPS5Q92905 334 aa23.51■■□□□ 1.35
GATC-202ENST00000548171 NECAB3Q96P71 396 aaPredicted RBP23.51■■□□□ 1.35
GATC-202ENST00000548171 CERS4Q9HA82 394 aa23.51■■□□□ 1.35
GATC-202ENST00000548171 REV3LO60673 3130 aa23.51■■□□□ 1.35
GATC-202ENST00000548171 HSPD1P10809 573 aaKnown RBP23.5■■□□□ 1.35
GATC-202ENST00000548171 KCNQ1P51787 676 aa23.5■■□□□ 1.35
GATC-202ENST00000548171 PTGISQ16647 500 aa23.5■■□□□ 1.35
GATC-202ENST00000548171 SESTD1Q86VW0 696 aa23.5■■□□□ 1.35
GATC-202ENST00000548171 AFAP1L1Q8TED9 768 aa23.5■■□□□ 1.35
GATC-202ENST00000548171 ARNTL2Q8WYA1 636 aa23.5■■□□□ 1.35
GATC-202ENST00000548171 FAM227BQ96M60 508 aa23.5■■□□□ 1.35
GATC-202ENST00000548171 COL4A4P53420 1690 aaPredicted RBP23.5■■□□□ 1.35
GATC-202ENST00000548171 A0A0D9SFI3 127 aa23.49■■□□□ 1.35
GATC-202ENST00000548171 PARNO95453 639 aaKnown RBP23.49■■□□□ 1.35
GATC-202ENST00000548171 KCNJ6P48051 423 aa23.49■■□□□ 1.35
GATC-202ENST00000548171 RNF41Q9H4P4 317 aaPredicted RBP23.49■■□□□ 1.35
GATC-202ENST00000548171 RAPGEFL1Q9UHV5 662 aa23.49■■□□□ 1.35
GATC-202ENST00000548171 LAMA4Q16363 1823 aa23.48■■□□□ 1.35
GATC-202ENST00000548171 EPOPA6NHQ4 379 aa23.48■■□□□ 1.35
GATC-202ENST00000548171 ARIH2O95376 493 aa23.48■■□□□ 1.35
GATC-202ENST00000548171 NT5C2P49902 561 aa23.48■■□□□ 1.35
GATC-202ENST00000548171 PDE1AP54750 535 aa23.48■■□□□ 1.35
GATC-202ENST00000548171 ANKRD45Q5TZF3 282 aa23.48■■□□□ 1.35
GATC-202ENST00000548171 CCDC62Q6P9F0 684 aa23.48■■□□□ 1.35
GATC-202ENST00000548171 MYH7BA7E2Y1 1941 aa23.48■■□□□ 1.35
GATC-202ENST00000548171 TLL1O43897 1013 aa23.47■■□□□ 1.35
GATC-202ENST00000548171 GH1P01241 217 aa23.47■■□□□ 1.35
GATC-202ENST00000548171 MMP3P08254 477 aa23.47■■□□□ 1.35
GATC-202ENST00000548171 PLA2G5P39877 138 aa23.47■■□□□ 1.35
GATC-202ENST00000548171 HAND2P61296 217 aa23.47■■□□□ 1.35
GATC-202ENST00000548171 USH1GQ495M9 461 aa23.47■■□□□ 1.35
GATC-202ENST00000548171 DGKHQ86XP1 1220 aa23.47■■□□□ 1.35
GATC-202ENST00000548171 NSUN6Q8TEA1 469 aaKnown RBP23.47■■□□□ 1.35
GATC-202ENST00000548171 PPP1R13LQ8WUF5 828 aa23.47■■□□□ 1.35
GATC-202ENST00000548171 AFG1LQ8WV93 481 aa23.47■■□□□ 1.35
GATC-202ENST00000548171 ESR2Q92731 530 aa23.47■■□□□ 1.35
GATC-202ENST00000548171 ABCB11O95342 1321 aa23.47■■□□□ 1.35
GATC-202ENST00000548171 SELPP16109 830 aa23.46■■□□□ 1.35
GATC-202ENST00000548171 CHMP4BP1P59074 171 aa23.46■■□□□ 1.35
GATC-202ENST00000548171 RBL2Q08999 1139 aa23.46■■□□□ 1.35
GATC-202ENST00000548171 CCDC171Q6TFL3 1326 aa23.46■■□□□ 1.35
GATC-202ENST00000548171 HLA-CQ95604 372 aa23.46■■□□□ 1.35
GATC-202ENST00000548171 IWS1Q96ST2 819 aa23.46■■□□□ 1.35
GATC-202ENST00000548171 BRWD1Q9NSI6 2320 aa23.46■■□□□ 1.35
GATC-202ENST00000548171 CASTP20810 708 aaKnown RBP23.45■■□□□ 1.34
GATC-202ENST00000548171 MFAP1P55081 439 aaKnown RBP23.45■■□□□ 1.34
GATC-202ENST00000548171 ARHGAP1Q07960 439 aa23.45■■□□□ 1.34
GATC-202ENST00000548171 GRB10Q13322 594 aa23.45■■□□□ 1.34
GATC-202ENST00000548171 STXBP2Q15833 593 aa23.45■■□□□ 1.34
GATC-202ENST00000548171 CCDC178Q5BJE1 867 aa23.45■■□□□ 1.34
GATC-202ENST00000548171 MCF2L2Q86YR7 1114 aa23.45■■□□□ 1.34
GATC-202ENST00000548171 FAM122AQ96E09 287 aa23.45■■□□□ 1.34
GATC-202ENST00000548171 LMCD1Q9NZU5 365 aa23.45■■□□□ 1.34
GATC-202ENST00000548171 ARHGEF15O94989 841 aa23.44■■□□□ 1.34
GATC-202ENST00000548171 GOLGA8HP0CJ92 632 aa23.44■■□□□ 1.34
GATC-202ENST00000548171 WDR5P61964 334 aaKnown RBP23.44■■□□□ 1.34
GATC-202ENST00000548171 NMIQ13287 307 aaPredicted RBP23.44■■□□□ 1.34
GATC-202ENST00000548171 CDC37Q16543 378 aaPredicted RBP23.44■■□□□ 1.34
GATC-202ENST00000548171 DGKDQ16760 1214 aa23.44■■□□□ 1.34
GATC-202ENST00000548171 KRT40Q6A162 431 aa23.44■■□□□ 1.34
GATC-202ENST00000548171 GDF6Q6KF10 455 aaPredicted RBP23.44■■□□□ 1.34
GATC-202ENST00000548171 CNKSR3Q6P9H4 555 aa23.44■■□□□ 1.34
GATC-202ENST00000548171 SEPT14Q6ZU15 432 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms