RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 CFBP00751 764 aa19.94■□□□□ 0.78
HDAC7-227ENST00000548080 IGHA2P01877 340 aa19.94■□□□□ 0.78
HDAC7-227ENST00000548080 SMARCA1P28370 1054 aa19.94■□□□□ 0.78
HDAC7-227ENST00000548080 TRIM29Q14134 588 aa19.94■□□□□ 0.78
HDAC7-227ENST00000548080 MAP3K21Q5TCX8 1036 aa19.94■□□□□ 0.78
HDAC7-227ENST00000548080 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.94■□□□□ 0.781e-6■■■■□ 24.8
HDAC7-227ENST00000548080 ZSCAN16Q9H4T2 348 aaPredicted RBP19.94■□□□□ 0.78
HDAC7-227ENST00000548080 RBM27Q9P2N5 1060 aaKnown RBP19.94■□□□□ 0.78
HDAC7-227ENST00000548080 PNMA2Q9UL42 364 aa19.94■□□□□ 0.78
HDAC7-227ENST00000548080 CNGA1P29973 690 aa19.93■□□□□ 0.78
HDAC7-227ENST00000548080 HOXA13P31271 388 aaPredicted RBP19.93■□□□□ 0.78
HDAC7-227ENST00000548080 RESTQ13127 1097 aa19.93■□□□□ 0.78
HDAC7-227ENST00000548080 PKN1Q16512 942 aa19.93■□□□□ 0.78
HDAC7-227ENST00000548080 HEATR3Q7Z4Q2 680 aa19.93■□□□□ 0.78
HDAC7-227ENST00000548080 TMEM106CQ9BVX2 250 aa19.93■□□□□ 0.78
HDAC7-227ENST00000548080 COL20A1Q9P218 1284 aa19.93■□□□□ 0.78
HDAC7-227ENST00000548080 DIS3Q9Y2L1 958 aaKnown RBP19.93■□□□□ 0.78
HDAC7-227ENST00000548080 DDX11L8A8MPP1 907 aa19.92■□□□□ 0.78
HDAC7-227ENST00000548080 GOLGA6L22H0YM25 854 aa19.92■□□□□ 0.78
HDAC7-227ENST00000548080 ANO1Q5XXA6 986 aa19.92■□□□□ 0.78
HDAC7-227ENST00000548080 KRT40Q6A162 431 aa19.92■□□□□ 0.78
HDAC7-227ENST00000548080 MCTP1Q6DN14 999 aa19.92■□□□□ 0.78
HDAC7-227ENST00000548080 DEFB118Q96PH6 123 aa19.92■□□□□ 0.78
HDAC7-227ENST00000548080 HMX1Q9NP08 348 aaPredicted RBP19.92■□□□□ 0.78
HDAC7-227ENST00000548080 GJB4Q9NTQ9 266 aa19.92■□□□□ 0.78
HDAC7-227ENST00000548080 RPTORQ8N122 1335 aa19.92■□□□□ 0.78
HDAC7-227ENST00000548080 SNAI1O95863 264 aaPredicted RBP19.92■□□□□ 0.78
HDAC7-227ENST00000548080 CYBAP13498 195 aa19.92■□□□□ 0.78
HDAC7-227ENST00000548080 EN2P19622 333 aaPredicted RBP19.92■□□□□ 0.78
HDAC7-227ENST00000548080 FOXD4L6Q3SYB3 417 aaPredicted RBP19.92■□□□□ 0.78
HDAC7-227ENST00000548080 WWC2Q6AWC2 1192 aa19.92■□□□□ 0.78
HDAC7-227ENST00000548080 FOXD4L3Q6VB84 417 aaPredicted RBP19.92■□□□□ 0.78
HDAC7-227ENST00000548080 ARMCX2Q7L311 632 aa19.92■□□□□ 0.78
HDAC7-227ENST00000548080 SYTL5Q8TDW5 730 aaPredicted RBP19.92■□□□□ 0.78
HDAC7-227ENST00000548080 TAAR1Q96RJ0 339 aa19.92■□□□□ 0.78
HDAC7-227ENST00000548080 LRRC37A2A6NM11 1700 aa19.91■□□□□ 0.78
HDAC7-227ENST00000548080 XBP1P17861 261 aa19.91■□□□□ 0.78
HDAC7-227ENST00000548080 ALDH5A1P51649 535 aaPredicted RBP19.91■□□□□ 0.78
HDAC7-227ENST00000548080 NBR1Q14596 966 aa19.91■□□□□ 0.78
HDAC7-227ENST00000548080 EEPD1Q7L9B9 569 aa19.91■□□□□ 0.78
HDAC7-227ENST00000548080 CHAMP1Q96JM3 812 aa19.91■□□□□ 0.78
HDAC7-227ENST00000548080 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.91■□□□□ 0.78
HDAC7-227ENST00000548080 SCG2P13521 617 aa19.9■□□□□ 0.78
HDAC7-227ENST00000548080 PTMSP20962 102 aa19.9■□□□□ 0.78
HDAC7-227ENST00000548080 PFKFB3Q16875 520 aaPredicted RBP19.9■□□□□ 0.78
HDAC7-227ENST00000548080 TYW1BQ6NUM6 668 aa19.9■□□□□ 0.78
HDAC7-227ENST00000548080 MCF2L2Q86YR7 1114 aa19.9■□□□□ 0.78
HDAC7-227ENST00000548080 LENG1Q96BZ8 264 aaPredicted RBP19.9■□□□□ 0.78
HDAC7-227ENST00000548080 PAK6Q9NQU5 681 aaPredicted RBP19.9■□□□□ 0.78
HDAC7-227ENST00000548080 ZHX1Q9UKY1 873 aaPredicted RBP19.9■□□□□ 0.78
HDAC7-227ENST00000548080 FRMPD3Q5JV73 1810 aa19.89■□□□□ 0.78
HDAC7-227ENST00000548080 HSD17B4P51659 736 aa19.89■□□□□ 0.77
HDAC7-227ENST00000548080 MAMDC4Q6UXC1 1216 aa19.89■□□□□ 0.77
HDAC7-227ENST00000548080 ZNF467Q7Z7K2 595 aaPredicted RBP19.89■□□□□ 0.77
HDAC7-227ENST00000548080 FCHSD1Q86WN1 690 aa19.89■□□□□ 0.77
HDAC7-227ENST00000548080 U2AF1L4Q8WU68 220 aaKnown RBP19.89■□□□□ 0.77
HDAC7-227ENST00000548080 SHISA4Q96DD7 197 aa19.89■□□□□ 0.77
HDAC7-227ENST00000548080 SYNGAP1Q96PV0 1343 aa19.89■□□□□ 0.77
HDAC7-227ENST00000548080 GJB1P08034 283 aa19.88■□□□□ 0.77
HDAC7-227ENST00000548080 EIF2AK2P19525 551 aaKnown RBP19.88■□□□□ 0.77
HDAC7-227ENST00000548080 DNM1Q05193 864 aaKnown RBP19.88■□□□□ 0.77
HDAC7-227ENST00000548080 SAFBQ15424 915 aaKnown RBP eCLIP19.88■□□□□ 0.77
HDAC7-227ENST00000548080 UBE2SQ16763 222 aa19.88■□□□□ 0.77
HDAC7-227ENST00000548080 USP17L6PQ6QN14 398 aa19.88■□□□□ 0.77
HDAC7-227ENST00000548080 FBXO16Q8IX29 292 aaPredicted RBP19.88■□□□□ 0.77
HDAC7-227ENST00000548080 CNPY2Q9Y2B0 182 aa19.88■□□□□ 0.77
HDAC7-227ENST00000548080 ASB14A6NK59 587 aa19.87■□□□□ 0.77
HDAC7-227ENST00000548080 GCOM1H8Y6P7 765 aaPredicted RBP19.87■□□□□ 0.77
HDAC7-227ENST00000548080 STXBP3O00186 592 aa19.87■□□□□ 0.77
HDAC7-227ENST00000548080 MMP1P03956 469 aa19.87■□□□□ 0.77
HDAC7-227ENST00000548080 POLR2MP0CAP2 368 aa19.87■□□□□ 0.77
HDAC7-227ENST00000548080 ZNF865P0CJ78 1059 aaPredicted RBP19.87■□□□□ 0.77
HDAC7-227ENST00000548080 NAPAP54920 295 aa19.87■□□□□ 0.77
HDAC7-227ENST00000548080 TRAF1Q13077 416 aa19.87■□□□□ 0.77
HDAC7-227ENST00000548080 FAM173BQ6P4H8 233 aa19.87■□□□□ 0.77
HDAC7-227ENST00000548080 BRAPQ7Z569 592 aa19.87■□□□□ 0.77
HDAC7-227ENST00000548080 ZFP91Q96JP5 570 aaPredicted RBP19.87■□□□□ 0.77
HDAC7-227ENST00000548080 VPS54Q9P1Q0 977 aa19.87■□□□□ 0.77
HDAC7-227ENST00000548080 ADD3Q9UEY8 706 aaKnown RBP19.87■□□□□ 0.77
HDAC7-227ENST00000548080 KCNJ14Q9UNX9 436 aa19.87■□□□□ 0.77
HDAC7-227ENST00000548080 TFRCP02786 760 aaKnown RBP19.86■□□□□ 0.77
HDAC7-227ENST00000548080 PTGS1P23219 599 aa19.86■□□□□ 0.77
HDAC7-227ENST00000548080 KRT85P78386 507 aa19.86■□□□□ 0.77
HDAC7-227ENST00000548080 ACVR2BQ13705 512 aa19.86■□□□□ 0.77
HDAC7-227ENST00000548080 RMDN3Q96TC7 470 aa19.86■□□□□ 0.77
HDAC7-227ENST00000548080 KATNBL1Q9H079 304 aa19.86■□□□□ 0.77
HDAC7-227ENST00000548080 SH3GLB2Q9NR46 395 aa19.86■□□□□ 0.77
HDAC7-227ENST00000548080 ADCY6O43306 1168 aa19.86■□□□□ 0.77
HDAC7-227ENST00000548080 SGPL1O95470 568 aa19.86■□□□□ 0.77
HDAC7-227ENST00000548080 NCLP19338 710 aaKnown RBP19.86■□□□□ 0.77
HDAC7-227ENST00000548080 GJA8P48165 433 aa19.86■□□□□ 0.77
HDAC7-227ENST00000548080 GNL2Q13823 731 aaKnown RBP19.86■□□□□ 0.77
HDAC7-227ENST00000548080 LHX8Q68G74 356 aa19.86■□□□□ 0.77
HDAC7-227ENST00000548080 MSL3Q8N5Y2 521 aaKnown RBP19.86■□□□□ 0.77
HDAC7-227ENST00000548080 IL31RAQ8NI17 732 aa19.86■□□□□ 0.77
HDAC7-227ENST00000548080 PHF20Q9BVI0 1012 aa19.86■□□□□ 0.77
HDAC7-227ENST00000548080 PDGFCQ9NRA1 345 aa19.86■□□□□ 0.77
HDAC7-227ENST00000548080 DDX20Q9UHI6 824 aaKnown RBP19.86■□□□□ 0.77
HDAC7-227ENST00000548080 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.85■□□□□ 0.77
HDAC7-227ENST00000548080 KIF28PB7ZC32 967 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms