RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, human

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DEPDC4-204	ENST00000547823	FIBCD1	Q8N539	461 aa		4.26	□□□□□ -1.73
DEPDC4-204	ENST00000547823	TTLL6	Q8N841	843 aa		4.26	□□□□□ -1.73
DEPDC4-204	ENST00000547823	SLC9A7	Q96T83	725 aa		4.26	□□□□□ -1.73
DEPDC4-204	ENST00000547823	SEMA4A	Q9H3S1	761 aa		4.26	□□□□□ -1.73
DEPDC4-204	ENST00000547823	GP6	Q9HCN6	339 aa		4.26	□□□□□ -1.73
DEPDC4-204	ENST00000547823	NGRN	Q9NPE2	291 aa	Known RBP	4.26	□□□□□ -1.73
DEPDC4-204	ENST00000547823	SPATA6	Q9NWH7	488 aa	Predicted RBP	4.26	□□□□□ -1.73
DEPDC4-204	ENST00000547823	DIS3	Q9Y2L1	958 aa	Known RBP	4.26	□□□□□ -1.73
DEPDC4-204	ENST00000547823	ADGRL1	O94910	1474 aa		4.25	□□□□□ -1.73
DEPDC4-204	ENST00000547823	KDM6B	O15054	1643 aa		4.25	□□□□□ -1.73
DEPDC4-204	ENST00000547823	TARBP1	Q13395	1621 aa	Known RBP	4.25	□□□□□ -1.73
DEPDC4-204	ENST00000547823	CD3E	P07766	207 aa		4.25	□□□□□ -1.73
DEPDC4-204	ENST00000547823	THBS2	P35442	1172 aa		4.25	□□□□□ -1.73
DEPDC4-204	ENST00000547823	CRK	P46108	304 aa		4.25	□□□□□ -1.73
DEPDC4-204	ENST00000547823	ZNF445	P59923	1031 aa		4.25	□□□□□ -1.73
DEPDC4-204	ENST00000547823	KRTAP1-1	Q07627	177 aa		4.25	□□□□□ -1.73
DEPDC4-204	ENST00000547823	TCEAL1	Q15170	157 aa		4.25	□□□□□ -1.73
DEPDC4-204	ENST00000547823	SND1	Q7KZF4	910 aa	Known RBP eCLIP	4.25	□□□□□ -1.73
DEPDC4-204	ENST00000547823	HS2ST1	Q7LGA3	356 aa		4.25	□□□□□ -1.73
DEPDC4-204	ENST00000547823	ZC3H18	Q86VM9	953 aa	Known RBP	4.25	□□□□□ -1.73
DEPDC4-204	ENST00000547823	DCP2	Q8IU60	420 aa	Known RBP	4.25	□□□□□ -1.73
DEPDC4-204	ENST00000547823	SLITRK4	Q8IW52	837 aa		4.25	□□□□□ -1.73
DEPDC4-204	ENST00000547823	KY	Q8NBH2	561 aa		4.25	□□□□□ -1.73
DEPDC4-204	ENST00000547823	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	4.25	□□□□□ -1.73
DEPDC4-204	ENST00000547823	FAM161B	Q96MY7	647 aa		4.25	□□□□□ -1.73
DEPDC4-204	ENST00000547823	FCRL3	Q96P31	734 aa	Predicted RBP	4.25	□□□□□ -1.73
DEPDC4-204	ENST00000547823	TM9SF2	Q99805	663 aa		4.25	□□□□□ -1.73
DEPDC4-204	ENST00000547823	NT5C1A	Q9BXI3	368 aa		4.25	□□□□□ -1.73
DEPDC4-204	ENST00000547823	PLA2G2D	Q9UNK4	145 aa		4.25	□□□□□ -1.73
DEPDC4-204	ENST00000547823	INVS	Q9Y283	1065 aa		4.25	□□□□□ -1.73
DEPDC4-204	ENST00000547823	TOPBP1	Q92547	1522 aa		4.25	□□□□□ -1.73
DEPDC4-204	ENST00000547823	LAMTOR5	O43504	91 aa		4.24	□□□□□ -1.73
DEPDC4-204	ENST00000547823	ERCC3	P19447	782 aa		4.24	□□□□□ -1.73
DEPDC4-204	ENST00000547823	CD247	P20963	164 aa		4.24	□□□□□ -1.73
DEPDC4-204	ENST00000547823	PURA	Q00577	322 aa	Known RBP	4.24	□□□□□ -1.73
DEPDC4-204	ENST00000547823	WWC2	Q6AWC2	1192 aa		4.24	□□□□□ -1.73
DEPDC4-204	ENST00000547823	ETV3L	Q6ZN32	361 aa		4.24	□□□□□ -1.73
DEPDC4-204	ENST00000547823	FBXO33	Q7Z6M2	555 aa		4.24	□□□□□ -1.73
DEPDC4-204	ENST00000547823	NKD1	Q969G9	470 aa		4.24	□□□□□ -1.73
DEPDC4-204	ENST00000547823	LCOR	Q96JN0	433 aa	Predicted RBP	4.24	□□□□□ -1.73
DEPDC4-204	ENST00000547823	NOX5	Q96PH1	765 aa		4.24	□□□□□ -1.73
DEPDC4-204	ENST00000547823	SSBP3	Q9BWW4	388 aa	Predicted RBP	4.24	□□□□□ -1.73
DEPDC4-204	ENST00000547823	SCAND2P	Q9GZW5	306 aa	Predicted RBP	4.24	□□□□□ -1.73
DEPDC4-204	ENST00000547823	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	4.24	□□□□□ -1.73
DEPDC4-204	ENST00000547823	ZNRF3	Q9ULT6	936 aa		4.24	□□□□□ -1.73
DEPDC4-204	ENST00000547823	WIZ	O95785	1651 aa		4.23	□□□□□ -1.73
DEPDC4-204	ENST00000547823		C9IYK1	514 aa		4.23	□□□□□ -1.73
DEPDC4-204	ENST00000547823	SLPI	P03973	132 aa		4.23	□□□□□ -1.73
DEPDC4-204	ENST00000547823	C11orf84	Q9BUA3	381 aa	Predicted RBP	4.23	□□□□□ -1.73
DEPDC4-204	ENST00000547823	AP5M1	Q9H0R1	490 aa		4.23	□□□□□ -1.73
DEPDC4-204	ENST00000547823	VPS11	Q9H270	941 aa		4.23	□□□□□ -1.73
DEPDC4-204	ENST00000547823	COPRS	Q9NQ92	184 aa		4.23	□□□□□ -1.73
DEPDC4-204	ENST00000547823	UBP1	Q9NZI7	540 aa		4.23	□□□□□ -1.73
DEPDC4-204	ENST00000547823	WHRN	Q9P202	907 aa		4.23	□□□□□ -1.73
DEPDC4-204	ENST00000547823	CYP7B1	O75881	506 aa		4.22	□□□□□ -1.73
DEPDC4-204	ENST00000547823	IFNGR1	P15260	489 aa		4.22	□□□□□ -1.73
DEPDC4-204	ENST00000547823	SEPHS1	P49903	392 aa		4.22	□□□□□ -1.73
DEPDC4-204	ENST00000547823	SMAD4	Q13485	552 aa	Known RBP	4.22	□□□□□ -1.73
DEPDC4-204	ENST00000547823	USP33	Q8TEY7	942 aa		4.22	□□□□□ -1.73
DEPDC4-204	ENST00000547823	BRF1	Q92994	677 aa		4.22	□□□□□ -1.73
DEPDC4-204	ENST00000547823	DDX11	Q96FC9	970 aa		4.22	□□□□□ -1.73
DEPDC4-204	ENST00000547823	GBP3	Q9H0R5	595 aa		4.22	□□□□□ -1.73
DEPDC4-204	ENST00000547823	NOL6	Q9H6R4	1146 aa	Known RBP	4.22	□□□□□ -1.73
DEPDC4-204	ENST00000547823	GGT7	Q9UJ14	662 aa		4.22	□□□□□ -1.73
DEPDC4-204	ENST00000547823	ST6GALNAC2	Q9UJ37	374 aa		4.22	□□□□□ -1.73
DEPDC4-204	ENST00000547823	SNAPC4	Q5SXM2	1469 aa		4.22	□□□□□ -1.73
DEPDC4-204	ENST00000547823	TSPOAP1	O95153	1857 aa		4.22	□□□□□ -1.73
DEPDC4-204	ENST00000547823	AURKA	O14965	403 aa		4.21	□□□□□ -1.74
DEPDC4-204	ENST00000547823	NPHS1	O60500	1241 aa		4.21	□□□□□ -1.74
DEPDC4-204	ENST00000547823	C8B	P07358	591 aa		4.21	□□□□□ -1.74
DEPDC4-204	ENST00000547823	PAM	P19021	973 aa		4.21	□□□□□ -1.74
DEPDC4-204	ENST00000547823	SELENOP	P49908	381 aa		4.21	□□□□□ -1.74
DEPDC4-204	ENST00000547823	AXDND1	Q5T1B0	1012 aa	Predicted RBP	4.21	□□□□□ -1.74
DEPDC4-204	ENST00000547823	TDRD10	Q5VZ19	366 aa	Known RBP	4.21	□□□□□ -1.74
DEPDC4-204	ENST00000547823	DCAF15	Q66K64	600 aa		4.21	□□□□□ -1.74
DEPDC4-204	ENST00000547823	SPRED1	Q7Z699	444 aa		4.21	□□□□□ -1.74
DEPDC4-204	ENST00000547823	CIR1	Q86X95	450 aa	Predicted RBP	4.21	□□□□□ -1.74
DEPDC4-204	ENST00000547823	MIB1	Q86YT6	1006 aa		4.21	□□□□□ -1.74
DEPDC4-204	ENST00000547823		Q8N1X5	172 aa		4.21	□□□□□ -1.74
DEPDC4-204	ENST00000547823	ZDHHC15	Q96MV8	337 aa		4.21	□□□□□ -1.74
DEPDC4-204	ENST00000547823	GORASP1	Q9BQQ3	440 aa		4.21	□□□□□ -1.74
DEPDC4-204	ENST00000547823	MTA3	Q9BTC8	594 aa		4.21	□□□□□ -1.74
DEPDC4-204	ENST00000547823	TRAIP	Q9BWF2	469 aa		4.21	□□□□□ -1.74
DEPDC4-204	ENST00000547823	KLC2	Q9H0B6	622 aa		4.21	□□□□□ -1.74
DEPDC4-204	ENST00000547823	PCED1A	Q9H1Q7	454 aa		4.21	□□□□□ -1.74
DEPDC4-204	ENST00000547823	ADAMTS1	Q9UHI8	967 aa		4.21	□□□□□ -1.74
DEPDC4-204	ENST00000547823	RWDD3	Q9Y3V2	267 aa		4.21	□□□□□ -1.74
DEPDC4-204	ENST00000547823	TCAF1	Q9Y4C2	921 aa		4.21	□□□□□ -1.74
DEPDC4-204	ENST00000547823	BACE2	Q9Y5Z0	518 aa		4.21	□□□□□ -1.74
DEPDC4-204	ENST00000547823	SLC12A7	Q9Y666	1083 aa		4.21	□□□□□ -1.74
DEPDC4-204	ENST00000547823	ABCC8	Q09428	1581 aa		4.21	□□□□□ -1.74
DEPDC4-204	ENST00000547823	DNMBP	Q6XZF7	1577 aa		4.21	□□□□□ -1.74
DEPDC4-204	ENST00000547823	ABCC10	Q5T3U5	1492 aa		4.2	□□□□□ -1.74
DEPDC4-204	ENST00000547823	NPEPPSL1	A6NEC2	478 aa		4.2	□□□□□ -1.74
DEPDC4-204	ENST00000547823	ACR	P10323	421 aa		4.2	□□□□□ -1.74
DEPDC4-204	ENST00000547823	GRB10	Q13322	594 aa		4.2	□□□□□ -1.74
DEPDC4-204	ENST00000547823	CRB2	Q5IJ48	1285 aa		4.2	□□□□□ -1.74
DEPDC4-204	ENST00000547823	C9orf131	Q5VYM1	1079 aa		4.2	□□□□□ -1.74
DEPDC4-204	ENST00000547823	PPFIBP1	Q86W92	1011 aa		4.2	□□□□□ -1.74
DEPDC4-204	ENST00000547823	KIAA0825	Q8IV33	1275 aa		4.2	□□□□□ -1.74

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