RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 IGDCC4Q8TDY8 1250 aa12.02□□□□□ -0.49
BEST3-208ENST00000547208 ESYT1Q9BSJ8 1104 aa12.02□□□□□ -0.49
BEST3-208ENST00000547208 WDR11Q9BZH6 1224 aa12.02□□□□□ -0.49
BEST3-208ENST00000547208 VAT1LQ9HCJ6 419 aa12.02□□□□□ -0.49
BEST3-208ENST00000547208 SCN5AQ14524 2016 aa12.02□□□□□ -0.49
BEST3-208ENST00000547208 DCDC2CA8MYV0 355 aa12.01□□□□□ -0.49
BEST3-208ENST00000547208 IFIT3O14879 490 aaKnown RBP12.01□□□□□ -0.49
BEST3-208ENST00000547208 CYTH3O43739 400 aa12.01□□□□□ -0.49
BEST3-208ENST00000547208 CD4P01730 458 aa12.01□□□□□ -0.49
BEST3-208ENST00000547208 BMP2KLQ5H9B9 411 aa12.01□□□□□ -0.49
BEST3-208ENST00000547208 RALYLQ86SE5 291 aaKnown RBP12.01□□□□□ -0.49
BEST3-208ENST00000547208 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.01□□□□□ -0.49
BEST3-208ENST00000547208 TAAR1Q96RJ0 339 aa12.01□□□□□ -0.49
BEST3-208ENST00000547208 AP5M1Q9H0R1 490 aa12.01□□□□□ -0.49
BEST3-208ENST00000547208 RIOX1Q9H6W3 641 aa12.01□□□□□ -0.49
BEST3-208ENST00000547208 TMEM39AQ9NV64 488 aa12.01□□□□□ -0.49
BEST3-208ENST00000547208 MROH7Q68CQ1 1323 aa12.01□□□□□ -0.49
BEST3-208ENST00000547208 TRIP12Q14669 1992 aaPredicted RBP12.01□□□□□ -0.49
BEST3-208ENST00000547208 PITPNM1O00562 1244 aa12□□□□□ -0.49
BEST3-208ENST00000547208 ZBTB5O15062 677 aa12□□□□□ -0.49
BEST3-208ENST00000547208 DHX16O60231 1041 aaKnown RBP12□□□□□ -0.49
BEST3-208ENST00000547208 CABYRO75952 493 aa12□□□□□ -0.49
BEST3-208ENST00000547208 ARIH2O95376 493 aa12□□□□□ -0.49
BEST3-208ENST00000547208 TIMP1P01033 207 aa12□□□□□ -0.49
BEST3-208ENST00000547208 RAG1P15918 1043 aa12□□□□□ -0.49
BEST3-208ENST00000547208 HSD17B4P51659 736 aa12□□□□□ -0.49
BEST3-208ENST00000547208 PDE4DQ08499 809 aa12□□□□□ -0.49
BEST3-208ENST00000547208 WTAPQ15007 396 aa12□□□□□ -0.49
BEST3-208ENST00000547208 NECTIN1Q15223 517 aa12□□□□□ -0.49
BEST3-208ENST00000547208 AMNQ9BXJ7 453 aa12□□□□□ -0.49
BEST3-208ENST00000547208 LY9Q9HBG7 655 aa12□□□□□ -0.49
BEST3-208ENST00000547208 GPHNQ9NQX3 736 aaPredicted RBP12□□□□□ -0.49
BEST3-208ENST00000547208 MRPL11Q9Y3B7 192 aaKnown RBP12□□□□□ -0.49
BEST3-208ENST00000547208 SLC27A2O14975 620 aa11.99□□□□□ -0.49
BEST3-208ENST00000547208 PSMC6P62333 389 aa11.99□□□□□ -0.49
BEST3-208ENST00000547208 PURAQ00577 322 aaKnown RBP11.99□□□□□ -0.49
BEST3-208ENST00000547208 ITGA7Q13683 1181 aa11.99□□□□□ -0.49
BEST3-208ENST00000547208 PPP2R5BQ15173 497 aa11.99□□□□□ -0.49
BEST3-208ENST00000547208 TMEM67Q5HYA8 995 aa11.99□□□□□ -0.49
BEST3-208ENST00000547208 CCDC62Q6P9F0 684 aa11.99□□□□□ -0.49
BEST3-208ENST00000547208 MCF2L2Q86YR7 1114 aa11.99□□□□□ -0.49
BEST3-208ENST00000547208 SCFD2Q8WU76 684 aa11.99□□□□□ -0.49
BEST3-208ENST00000547208 COPS5Q92905 334 aa11.99□□□□□ -0.49
BEST3-208ENST00000547208 VTI1AQ96AJ9 217 aa11.99□□□□□ -0.49
BEST3-208ENST00000547208 ERICH2A1L162 156 aa11.98□□□□□ -0.49
BEST3-208ENST00000547208 NKRFO15226 690 aaKnown RBP eCLIP11.98□□□□□ -0.49
BEST3-208ENST00000547208 ZEB2O60315 1214 aa11.98□□□□□ -0.49
BEST3-208ENST00000547208 TXNP10599 105 aaKnown RBP11.98□□□□□ -0.49
BEST3-208ENST00000547208 FPGSQ05932 587 aa11.98□□□□□ -0.49
BEST3-208ENST00000547208 SART3Q15020 963 aaKnown RBP11.98□□□□□ -0.49
BEST3-208ENST00000547208 CREB3L3Q68CJ9 461 aa11.98□□□□□ -0.49
BEST3-208ENST00000547208 MFSD5Q6N075 450 aa11.98□□□□□ -0.49
BEST3-208ENST00000547208 OR6J1Q8NGC5 347 aa11.98□□□□□ -0.49
BEST3-208ENST00000547208 NSUN6Q8TEA1 469 aaKnown RBP11.98□□□□□ -0.49
BEST3-208ENST00000547208 PIGSQ96S52 555 aa11.98□□□□□ -0.49
BEST3-208ENST00000547208 IWS1Q96ST2 819 aa11.98□□□□□ -0.49
BEST3-208ENST00000547208 RMDN3Q96TC7 470 aa11.98□□□□□ -0.49
BEST3-208ENST00000547208 MPHOSPH6Q99547 160 aaKnown RBP11.98□□□□□ -0.49
BEST3-208ENST00000547208 MAP3K14Q99558 947 aa11.98□□□□□ -0.49
BEST3-208ENST00000547208 MTA3Q9BTC8 594 aa11.98□□□□□ -0.49
BEST3-208ENST00000547208 PXMP2Q9NR77 195 aa11.98□□□□□ -0.49
BEST3-208ENST00000547208 PCDHA1Q9Y5I3 950 aa11.98□□□□□ -0.49
BEST3-208ENST00000547208 TTC28Q96AY4 2481 aa11.98□□□□□ -0.49
BEST3-208ENST00000547208 PTPRSQ13332 1948 aa11.98□□□□□ -0.49
BEST3-208ENST00000547208 MUC3AQ02505 3323 aa11.97□□□□□ -0.49
BEST3-208ENST00000547208 UMODL1Q5DID0 1318 aa11.97□□□□□ -0.49
BEST3-208ENST00000547208 A6NJR5 290 aa11.97□□□□□ -0.49
BEST3-208ENST00000547208 B4DLN1 442 aa11.97□□□□□ -0.49
BEST3-208ENST00000547208 SH2B2O14492 632 aaPredicted RBP11.97□□□□□ -0.49
BEST3-208ENST00000547208 PRC1O43663 620 aa11.97□□□□□ -0.49
BEST3-208ENST00000547208 B4GALT4O60513 344 aa11.97□□□□□ -0.49
BEST3-208ENST00000547208 CFBP00751 764 aa11.97□□□□□ -0.49
BEST3-208ENST00000547208 EIF2AK2P19525 551 aaKnown RBP11.97□□□□□ -0.49
BEST3-208ENST00000547208 CPT1AP50416 773 aa11.97□□□□□ -0.49
BEST3-208ENST00000547208 MRPL12P52815 198 aaKnown RBP11.97□□□□□ -0.49
BEST3-208ENST00000547208 C16orf59Q7L2K0 433 aa11.97□□□□□ -0.49
BEST3-208ENST00000547208 CATIPQ7Z7H3 387 aa11.97□□□□□ -0.49
BEST3-208ENST00000547208 HOMER1Q86YM7 354 aa11.97□□□□□ -0.49
BEST3-208ENST00000547208 ZNF654Q8IZM8 581 aa11.97□□□□□ -0.49
BEST3-208ENST00000547208 MYL10Q9BUA6 226 aa11.97□□□□□ -0.49
BEST3-208ENST00000547208 SEZ6LQ9BYH1 1024 aa11.97□□□□□ -0.49
BEST3-208ENST00000547208 TRPV6Q9H1D0 765 aa11.97□□□□□ -0.49
BEST3-208ENST00000547208 MAP3K20Q9NYL2 800 aaKnown RBP11.97□□□□□ -0.49
BEST3-208ENST00000547208 PNMA6FA0A0J9YX94 578 aa11.96□□□□□ -0.49
BEST3-208ENST00000547208 TLR3O15455 904 aaKnown RBP11.96□□□□□ -0.49
BEST3-208ENST00000547208 RGS20O76081 388 aa11.96□□□□□ -0.49
BEST3-208ENST00000547208 DDAH1O94760 285 aa11.96□□□□□ -0.49
BEST3-208ENST00000547208 CSF2RAP15509 400 aa11.96□□□□□ -0.49
BEST3-208ENST00000547208 HOXA13P31271 388 aaPredicted RBP11.96□□□□□ -0.49
BEST3-208ENST00000547208 MCM5P33992 734 aa11.96□□□□□ -0.49
BEST3-208ENST00000547208 ARHGAP1Q07960 439 aa11.96□□□□□ -0.49
BEST3-208ENST00000547208 TTLL4Q14679 1199 aa11.96□□□□□ -0.49
BEST3-208ENST00000547208 STXBP2Q15833 593 aa11.96□□□□□ -0.49
BEST3-208ENST00000547208 LY6KQ17RY6 165 aa11.96□□□□□ -0.49
BEST3-208ENST00000547208 ARHGEF16Q5VV41 709 aa11.96□□□□□ -0.49
BEST3-208ENST00000547208 FAM109BQ6ICB4 259 aaPredicted RBP11.96□□□□□ -0.49
BEST3-208ENST00000547208 SEPT14Q6ZU15 432 aa11.96□□□□□ -0.49
BEST3-208ENST00000547208 SAMD3Q8N6K7 520 aa11.96□□□□□ -0.49
BEST3-208ENST00000547208 IL31RAQ8NI17 732 aa11.96□□□□□ -0.49
BEST3-208ENST00000547208 TMEM87BQ96K49 555 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms