RNA–Protein interactions for RNA: ENST00000546537.6

TMEM116-203, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-203ENST00000546537 MKNK2Q9HBH9 465 aa12.89□□□□□ -0.35
TMEM116-203ENST00000546537 PLXNA3P51805 1871 aa12.89□□□□□ -0.35
TMEM116-203ENST00000546537 RALGAPA2Q2PPJ7 1873 aa12.89□□□□□ -0.35
TMEM116-203ENST00000546537 RAD50Q92878 1312 aa12.88□□□□□ -0.35
TMEM116-203ENST00000546537 LOC102724159A0A0B4J2E5 919 aa12.88□□□□□ -0.35
TMEM116-203ENST00000546537 H3BNC9 293 aa12.88□□□□□ -0.35
TMEM116-203ENST00000546537 LTBRP36941 435 aa12.88□□□□□ -0.35
TMEM116-203ENST00000546537 HTRA4P83105 476 aaPredicted RBP12.88□□□□□ -0.35
TMEM116-203ENST00000546537 IKBKEQ14164 716 aa12.88□□□□□ -0.35
TMEM116-203ENST00000546537 PWP2Q15269 919 aaKnown RBP12.88□□□□□ -0.35
TMEM116-203ENST00000546537 EPC2Q52LR7 807 aa12.88□□□□□ -0.35
TMEM116-203ENST00000546537 SBK1Q52WX2 424 aa12.88□□□□□ -0.35
TMEM116-203ENST00000546537 SLFN13Q68D06 897 aa12.88□□□□□ -0.35
TMEM116-203ENST00000546537 FAM160B2Q86V87 743 aa12.88□□□□□ -0.35
TMEM116-203ENST00000546537 LRRC47Q8N1G4 583 aaKnown RBP12.88□□□□□ -0.35
TMEM116-203ENST00000546537 SP7Q8TDD2 431 aaPredicted RBP12.88□□□□□ -0.35
TMEM116-203ENST00000546537 CHURC1Q8WUH1 139 aa12.88□□□□□ -0.35
TMEM116-203ENST00000546537 DHX38Q92620 1227 aaKnown RBP12.88□□□□□ -0.35
TMEM116-203ENST00000546537 FRAT1Q92837 279 aaPredicted RBP12.88□□□□□ -0.35
TMEM116-203ENST00000546537 PBXIP1Q96AQ6 731 aa12.88□□□□□ -0.35
TMEM116-203ENST00000546537 CEP95Q96GE4 821 aa12.88□□□□□ -0.35
TMEM116-203ENST00000546537 SAMD11Q96NU1 681 aa12.88□□□□□ -0.35
TMEM116-203ENST00000546537 NSUN3Q9H649 340 aaKnown RBP12.88□□□□□ -0.35
TMEM116-203ENST00000546537 ALG13Q9NP73 1137 aaKnown RBP12.88□□□□□ -0.35
TMEM116-203ENST00000546537 CLDND1Q9NY35 253 aa12.88□□□□□ -0.35
TMEM116-203ENST00000546537 MTMR4Q9NYA4 1195 aa12.88□□□□□ -0.35
TMEM116-203ENST00000546537 EXOC6BQ9Y2D4 811 aa12.88□□□□□ -0.35
TMEM116-203ENST00000546537 SPTBN4Q9H254 2564 aa12.87□□□□□ -0.35
TMEM116-203ENST00000546537 COL4A6Q14031 1691 aa12.87□□□□□ -0.35
TMEM116-203ENST00000546537 TMEM221A6NGB7 291 aa12.87□□□□□ -0.35
TMEM116-203ENST00000546537 M0R296 226 aa12.87□□□□□ -0.35
TMEM116-203ENST00000546537 NKRFO15226 690 aaKnown RBP eCLIP12.87□□□□□ -0.35
TMEM116-203ENST00000546537 TTLL1O95922 423 aa12.87□□□□□ -0.35
TMEM116-203ENST00000546537 CHGBP05060 677 aa12.87□□□□□ -0.35
TMEM116-203ENST00000546537 ALDH5A1P51649 535 aaPredicted RBP12.87□□□□□ -0.35
TMEM116-203ENST00000546537 UBE3CQ15386 1083 aa12.87□□□□□ -0.35
TMEM116-203ENST00000546537 GDF6Q6KF10 455 aaPredicted RBP12.87□□□□□ -0.35
TMEM116-203ENST00000546537 TRIM67Q6ZTA4 783 aa12.87□□□□□ -0.35
TMEM116-203ENST00000546537 SESTD1Q86VW0 696 aa12.87□□□□□ -0.35
TMEM116-203ENST00000546537 SUGP1Q8IWZ8 645 aaKnown RBP12.87□□□□□ -0.35
TMEM116-203ENST00000546537 STK11IPQ8N1F8 1099 aa12.87□□□□□ -0.35
TMEM116-203ENST00000546537 STAG1Q8WVM7 1258 aa12.87□□□□□ -0.35
TMEM116-203ENST00000546537 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.87□□□□□ -0.351e-6■□□□□ 8.8
TMEM116-203ENST00000546537 IL1RAPL2Q9NP60 686 aa12.87□□□□□ -0.35
TMEM116-203ENST00000546537 FAM86C1Q9NVL1 165 aa12.87□□□□□ -0.35
TMEM116-203ENST00000546537 PAG1Q9NWQ8 432 aa12.87□□□□□ -0.35
TMEM116-203ENST00000546537 ADD3Q9UEY8 706 aaKnown RBP12.87□□□□□ -0.35
TMEM116-203ENST00000546537 MBTPS2O43462 519 aa12.86□□□□□ -0.35
TMEM116-203ENST00000546537 NCK2O43639 380 aa12.86□□□□□ -0.35
TMEM116-203ENST00000546537 CKBP12277 381 aa12.86□□□□□ -0.35
TMEM116-203ENST00000546537 GPM6BQ13491 265 aa12.86□□□□□ -0.35
TMEM116-203ENST00000546537 CTC1Q2NKJ3 1217 aa12.86□□□□□ -0.35
TMEM116-203ENST00000546537 NSMFQ6X4W1 530 aa12.86□□□□□ -0.35
TMEM116-203ENST00000546537 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.86□□□□□ -0.35
TMEM116-203ENST00000546537 RPAINQ86UA6 219 aa12.86□□□□□ -0.35
TMEM116-203ENST00000546537 RHPN1Q8TCX5 695 aa12.86□□□□□ -0.35
TMEM116-203ENST00000546537 PUS7LQ9H0K6 701 aaKnown RBP12.86□□□□□ -0.35
TMEM116-203ENST00000546537 ZFHX2Q9C0A1 2572 aaPredicted RBP12.86□□□□□ -0.35
TMEM116-203ENST00000546537 PLA2G6O60733 806 aa12.85□□□□□ -0.35
TMEM116-203ENST00000546537 IKQ13123 557 aaPredicted RBP12.85□□□□□ -0.35
TMEM116-203ENST00000546537 MKRN4PQ13434 485 aaPredicted RBP12.85□□□□□ -0.35
TMEM116-203ENST00000546537 BAATQ14032 418 aaPredicted RBP12.85□□□□□ -0.35
TMEM116-203ENST00000546537 PPP2R5BQ15173 497 aa12.85□□□□□ -0.35
TMEM116-203ENST00000546537 ZNF444Q8N0Y2 327 aaPredicted RBP12.85□□□□□ -0.35
TMEM116-203ENST00000546537 FBXL6Q8N531 539 aa12.85□□□□□ -0.35
TMEM116-203ENST00000546537 COPS5Q92905 334 aa12.85□□□□□ -0.35
TMEM116-203ENST00000546537 GMCL1Q96IK5 515 aa12.85□□□□□ -0.35
TMEM116-203ENST00000546537 IRF2BPLQ9H1B7 796 aa12.85□□□□□ -0.35
TMEM116-203ENST00000546537 MINDY4BA8MYZ0 360 aa12.84□□□□□ -0.35
TMEM116-203ENST00000546537 AMHP03971 560 aa12.84□□□□□ -0.35
TMEM116-203ENST00000546537 SLC1A4P43007 532 aa12.84□□□□□ -0.35
TMEM116-203ENST00000546537 CHMP4BP1P59074 171 aa12.84□□□□□ -0.35
TMEM116-203ENST00000546537 SNAP25P60880 206 aa12.84□□□□□ -0.35
TMEM116-203ENST00000546537 DLX2Q07687 328 aaPredicted RBP12.84□□□□□ -0.35
TMEM116-203ENST00000546537 CEP85Q6P2H3 762 aa12.84□□□□□ -0.35
TMEM116-203ENST00000546537 TRAF7Q6Q0C0 670 aa12.84□□□□□ -0.35
TMEM116-203ENST00000546537 ERMP1Q7Z2K6 904 aa12.84□□□□□ -0.35
TMEM116-203ENST00000546537 SCFD2Q8WU76 684 aa12.84□□□□□ -0.35
TMEM116-203ENST00000546537 GTF2IRD1Q9UHL9 959 aa12.84□□□□□ -0.35
TMEM116-203ENST00000546537 CCPG1Q9ULG6 757 aa12.84□□□□□ -0.35
TMEM116-203ENST00000546537 PRR12Q9ULL5 1215 aa12.84□□□□□ -0.35
TMEM116-203ENST00000546537 ISY1Q9ULR0 285 aaKnown RBP12.84□□□□□ -0.35
TMEM116-203ENST00000546537 DCHS1Q96JQ0 3298 aa12.84□□□□□ -0.35
TMEM116-203ENST00000546537 DMDP11532 3685 aa12.84□□□□□ -0.35
TMEM116-203ENST00000546537 PLIN4Q96Q06 1357 aa12.83□□□□□ -0.36
TMEM116-203ENST00000546537 MYO7AQ13402 2215 aa12.83□□□□□ -0.36
TMEM116-203ENST00000546537 GSG1L2A8MUP6 293 aa12.83□□□□□ -0.36
TMEM116-203ENST00000546537 PROB1E7EW31 1015 aa12.83□□□□□ -0.36
TMEM116-203ENST00000546537 RBAK-RBAKDNI3L0D1 243 aa12.83□□□□□ -0.36
TMEM116-203ENST00000546537 STXBP3O00186 592 aa12.83□□□□□ -0.36
TMEM116-203ENST00000546537 LGR5O75473 907 aa12.83□□□□□ -0.36
TMEM116-203ENST00000546537 PRDM1O75626 825 aa12.83□□□□□ -0.36
TMEM116-203ENST00000546537 ICAM1P05362 532 aa12.83□□□□□ -0.36
TMEM116-203ENST00000546537 TXNP10599 105 aaKnown RBP12.83□□□□□ -0.36
TMEM116-203ENST00000546537 ZXDAP98168 799 aa12.83□□□□□ -0.36
TMEM116-203ENST00000546537 SMAD4Q13485 552 aaKnown RBP12.83□□□□□ -0.36
TMEM116-203ENST00000546537 MBTPS1Q14703 1052 aa12.83□□□□□ -0.36
TMEM116-203ENST00000546537 CLUL1Q15846 466 aa12.83□□□□□ -0.36
TMEM116-203ENST00000546537 GIMAP6Q6P9H5 292 aa12.83□□□□□ -0.36
TMEM116-203ENST00000546537 FBXO11Q86XK2 927 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms