RNA–Protein interactions for RNA: ENST00000546102.1

CUL3-215, Transcript of cullin 3, humanhuman

TSL 4

Gene CUL3, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-215ENST00000546102 NLRC3Q7RTR2 1065 aa4.53□□□□□ -1.68
CUL3-215ENST00000546102 WFDC3Q8IUB2 231 aa4.53□□□□□ -1.68
CUL3-215ENST00000546102 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.53□□□□□ -1.68
CUL3-215ENST00000546102 AFAP1L2Q8N4X5 818 aa4.53□□□□□ -1.68
CUL3-215ENST00000546102 KISS1RQ969F8 398 aaPredicted RBP4.53□□□□□ -1.68
CUL3-215ENST00000546102 DHRS4Q9BTZ2 278 aa4.53□□□□□ -1.68
CUL3-215ENST00000546102 EPN3Q9H201 632 aa4.53□□□□□ -1.68
CUL3-215ENST00000546102 CCDC86Q9H6F5 360 aaKnown RBP4.53□□□□□ -1.68
CUL3-215ENST00000546102 KLHL3Q9UH77 587 aa4.53□□□□□ -1.68
CUL3-215ENST00000546102 GTF2IRD1Q9UHL9 959 aa4.53□□□□□ -1.68
CUL3-215ENST00000546102 ADAMTS6Q9UKP5 1117 aa4.53□□□□□ -1.68
CUL3-215ENST00000546102 MAPRE3Q9UPY8 281 aa4.53□□□□□ -1.68
CUL3-215ENST00000546102 MRPS23Q9Y3D9 190 aaKnown RBP4.53□□□□□ -1.68
CUL3-215ENST00000546102 SNX11Q9Y5W9 270 aa4.53□□□□□ -1.68
CUL3-215ENST00000546102 PLA2R1Q13018 1463 aa4.53□□□□□ -1.68
CUL3-215ENST00000546102 NPATQ14207 1427 aa4.53□□□□□ -1.68
CUL3-215ENST00000546102 PREX1Q8TCU6 1659 aa4.52□□□□□ -1.69
CUL3-215ENST00000546102 MYOM2P54296 1465 aa4.52□□□□□ -1.69
CUL3-215ENST00000546102 TRBV23-1A0A0A0MS06 115 aa4.52□□□□□ -1.69
CUL3-215ENST00000546102 A0A1W2PQU0 124 aa4.52□□□□□ -1.69
CUL3-215ENST00000546102 SHTN1A0MZ66 631 aa4.52□□□□□ -1.69
CUL3-215ENST00000546102 AGRPO00253 132 aa4.52□□□□□ -1.69
CUL3-215ENST00000546102 TNFRSF10CO14798 259 aa4.52□□□□□ -1.69
CUL3-215ENST00000546102 EIF3JO75822 258 aaKnown RBP4.52□□□□□ -1.69
CUL3-215ENST00000546102 SCGB1D2O95969 90 aa4.52□□□□□ -1.69
CUL3-215ENST00000546102 SDSP20132 328 aa4.52□□□□□ -1.69
CUL3-215ENST00000546102 GNALP38405 381 aa4.52□□□□□ -1.69
CUL3-215ENST00000546102 CD96P40200 585 aa4.52□□□□□ -1.69
CUL3-215ENST00000546102 MCL1Q07820 350 aa4.52□□□□□ -1.69
CUL3-215ENST00000546102 IKZF1Q13422 519 aa4.52□□□□□ -1.69
CUL3-215ENST00000546102 MLANAQ16655 118 aa4.52□□□□□ -1.69
CUL3-215ENST00000546102 KIF4BQ2VIQ3 1234 aa4.52□□□□□ -1.69
CUL3-215ENST00000546102 YOD1Q5VVQ6 348 aaPredicted RBP4.52□□□□□ -1.69
CUL3-215ENST00000546102 INTS3Q68E01 1043 aaKnown RBP4.52□□□□□ -1.69
CUL3-215ENST00000546102 CCSAPQ6IQ19 270 aaPredicted RBP4.52□□□□□ -1.69
CUL3-215ENST00000546102 SPOCD1Q6ZMY3 1216 aa4.52□□□□□ -1.69
CUL3-215ENST00000546102 STRA8Q7Z7C7 330 aa4.52□□□□□ -1.69
CUL3-215ENST00000546102 LRRTM3Q86VH5 581 aa4.52□□□□□ -1.69
CUL3-215ENST00000546102 TOP6BLQ8N6T0 577 aa4.52□□□□□ -1.69
CUL3-215ENST00000546102 FLAD1Q8NFF5 587 aa4.52□□□□□ -1.69
CUL3-215ENST00000546102 LEO1Q8WVC0 666 aaPredicted RBP4.52□□□□□ -1.69
CUL3-215ENST00000546102 RELTQ969Z4 430 aa4.52□□□□□ -1.69
CUL3-215ENST00000546102 IPO9Q96P70 1041 aaKnown RBP4.52□□□□□ -1.69
CUL3-215ENST00000546102 SMAD5Q99717 465 aaKnown RBP4.52□□□□□ -1.69
CUL3-215ENST00000546102 DUSP23Q9BVJ7 150 aa4.52□□□□□ -1.69
CUL3-215ENST00000546102 CNNM2Q9H8M5 875 aa4.52□□□□□ -1.69
CUL3-215ENST00000546102 PRDM16Q9HAZ2 1276 aa4.52□□□□□ -1.69
CUL3-215ENST00000546102 ARHGEF4Q9NR80 690 aa4.52□□□□□ -1.69
CUL3-215ENST00000546102 PICK1Q9NRD5 415 aa4.52□□□□□ -1.69
CUL3-215ENST00000546102 FAM86C1Q9NVL1 165 aa4.52□□□□□ -1.69
CUL3-215ENST00000546102 PIK3C2BO00750 1634 aa4.52□□□□□ -1.69
CUL3-215ENST00000546102 TRPM1Q7Z4N2 1603 aa4.52□□□□□ -1.69
CUL3-215ENST00000546102 PRAG1Q86YV5 1406 aa4.52□□□□□ -1.69
CUL3-215ENST00000546102 MROH2AA6NES4 1674 aa4.51□□□□□ -1.69
CUL3-215ENST00000546102 CLTCQ00610 1675 aaKnown RBP4.51□□□□□ -1.69
CUL3-215ENST00000546102 MADDQ8WXG6 1647 aa4.51□□□□□ -1.69
CUL3-215ENST00000546102 TRAV20A0A0B4J274 112 aa4.51□□□□□ -1.69
CUL3-215ENST00000546102 GNAT3A8MTJ3 354 aa4.51□□□□□ -1.69
CUL3-215ENST00000546102 CHURC1-FNTBB4DL54 471 aa4.51□□□□□ -1.69
CUL3-215ENST00000546102 LEFTY1O75610 366 aa4.51□□□□□ -1.69
CUL3-215ENST00000546102 POLR2BP30876 1174 aaKnown RBP4.51□□□□□ -1.69
CUL3-215ENST00000546102 AFMP43652 599 aa4.51□□□□□ -1.69
CUL3-215ENST00000546102 OXCT1P55809 520 aa4.51□□□□□ -1.69
CUL3-215ENST00000546102 ZP2Q05996 745 aa4.51□□□□□ -1.69
CUL3-215ENST00000546102 UBE4AQ14139 1066 aa4.51□□□□□ -1.69
CUL3-215ENST00000546102 CDCP2Q5VXM1 449 aa4.51□□□□□ -1.69
CUL3-215ENST00000546102 GGT6Q6P531 493 aa4.51□□□□□ -1.69
CUL3-215ENST00000546102 MPZL3Q6UWV2 235 aa4.51□□□□□ -1.69
CUL3-215ENST00000546102 DDX46Q7L014 1031 aaKnown RBP4.51□□□□□ -1.69
CUL3-215ENST00000546102 HDXQ7Z353 690 aa4.51□□□□□ -1.69
CUL3-215ENST00000546102 RIN3Q8TB24 985 aa4.51□□□□□ -1.69
CUL3-215ENST00000546102 ELMO3Q96BJ8 720 aa4.51□□□□□ -1.69
CUL3-215ENST00000546102 WDR89Q96FK6 387 aaPredicted RBP4.51□□□□□ -1.69
CUL3-215ENST00000546102 ASPSCR1Q9BZE9 553 aa4.51□□□□□ -1.69
CUL3-215ENST00000546102 DISC1Q9NRI5 854 aa4.51□□□□□ -1.69
CUL3-215ENST00000546102 CACNA2D2Q9NY47 1150 aa4.51□□□□□ -1.69
CUL3-215ENST00000546102 ZNF214Q9UL59 606 aaPredicted RBP4.51□□□□□ -1.69
CUL3-215ENST00000546102 SNCAIPQ9Y6H5 919 aa4.51□□□□□ -1.69
CUL3-215ENST00000546102 SPATA31E1Q6ZUB1 1445 aa4.51□□□□□ -1.69
CUL3-215ENST00000546102 SYNMO15061 1565 aa4.51□□□□□ -1.69
CUL3-215ENST00000546102 POLR1AO95602 1720 aaPredicted RBP4.51□□□□□ -1.69
CUL3-215ENST00000546102 IFT172Q9UG01 1749 aa4.51□□□□□ -1.69
CUL3-215ENST00000546102 ERVK-7P63135 1459 aa4.5□□□□□ -1.69
CUL3-215ENST00000546102 SIGLEC1Q9BZZ2 1709 aa4.5□□□□□ -1.69
CUL3-215ENST00000546102 KIAA1210Q9ULL0 1709 aa4.5□□□□□ -1.69
CUL3-215ENST00000546102 SPATA31D1Q6ZQQ2 1576 aa4.5□□□□□ -1.69
CUL3-215ENST00000546102 UGGT1Q9NYU2 1555 aa4.5□□□□□ -1.69
CUL3-215ENST00000546102 NOS1P29475 1434 aa4.5□□□□□ -1.69
CUL3-215ENST00000546102 DNAJC25-GNG10A0A024R161 153 aa4.5□□□□□ -1.69
CUL3-215ENST00000546102 PRAMEF27A3QJZ7 478 aa4.5□□□□□ -1.69
CUL3-215ENST00000546102 DCDC2CA8MYV0 355 aa4.5□□□□□ -1.69
CUL3-215ENST00000546102 CREB3O43889 395 aa4.5□□□□□ -1.69
CUL3-215ENST00000546102 PLIN1O60240 522 aa4.5□□□□□ -1.69
CUL3-215ENST00000546102 ZNF862O60290 1169 aa4.5□□□□□ -1.69
CUL3-215ENST00000546102 CAND2O75155 1236 aa4.5□□□□□ -1.69
CUL3-215ENST00000546102 EYA4O95677 639 aa4.5□□□□□ -1.69
CUL3-215ENST00000546102 PGRP06401 933 aa4.5□□□□□ -1.69
CUL3-215ENST00000546102 CPEP16870 476 aa4.5□□□□□ -1.69
CUL3-215ENST00000546102 ATF3P18847 181 aa4.5□□□□□ -1.69
CUL3-215ENST00000546102 RAB27AP51159 221 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms