RNA–Protein interactions for RNA: ENST00000545718.2

SCAP-215, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 2,950 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-215ENST00000545718 JAKMIP2Q96AA8 810 aa17.42■□□□□ 0.38
SCAP-215ENST00000545718 DNAJC7Q99615 494 aa17.42■□□□□ 0.38
SCAP-215ENST00000545718 RAB34Q9BZG1 259 aa17.42■□□□□ 0.38
SCAP-215ENST00000545718 BLOC1S4Q9NUP1 217 aa17.42■□□□□ 0.38
SCAP-215ENST00000545718 USP17L10C9JJH3 530 aa17.42■□□□□ 0.38
SCAP-215ENST00000545718 TTLL1O95922 423 aa17.42■□□□□ 0.38
SCAP-215ENST00000545718 CYLC1P35663 651 aaPredicted RBP17.42■□□□□ 0.38
SCAP-215ENST00000545718 RBM5P52756 815 aaKnown RBP eCLIP17.42■□□□□ 0.38
SCAP-215ENST00000545718 GYS2P54840 703 aa17.42■□□□□ 0.38
SCAP-215ENST00000545718 KCNK18Q7Z418 384 aa17.42■□□□□ 0.38
SCAP-215ENST00000545718 FAM163AQ96GL9 167 aaPredicted RBP17.42■□□□□ 0.38
SCAP-215ENST00000545718 DRC1Q96MC2 740 aa17.42■□□□□ 0.38
SCAP-215ENST00000545718 NHEJ1Q9H9Q4 299 aaPredicted RBP17.42■□□□□ 0.38
SCAP-215ENST00000545718 JMJD4Q9H9V9 463 aa17.42■□□□□ 0.38
SCAP-215ENST00000545718 ZNF219Q9P2Y4 722 aaPredicted RBP17.42■□□□□ 0.38
SCAP-215ENST00000545718 DUSP10Q9Y6W6 482 aa17.42■□□□□ 0.38
SCAP-215ENST00000545718 KRT26Q7Z3Y9 468 aa17.41■□□□□ 0.38
SCAP-215ENST00000545718 ZSCAN29Q8IWY8 852 aaPredicted RBP17.41■□□□□ 0.38
SCAP-215ENST00000545718 PNMA5Q96PV4 448 aa17.41■□□□□ 0.38
SCAP-215ENST00000545718 LACRTQ9GZZ8 138 aa17.41■□□□□ 0.38
SCAP-215ENST00000545718 ZHX3Q9H4I2 956 aa17.41■□□□□ 0.38
SCAP-215ENST00000545718 ZNF831Q5JPB2 1677 aa17.41■□□□□ 0.38
SCAP-215ENST00000545718 CCDC151A5D8V7 595 aa17.41■□□□□ 0.38
SCAP-215ENST00000545718 PLEKP08567 350 aaPredicted RBP17.41■□□□□ 0.38
SCAP-215ENST00000545718 KRT83P78385 493 aa17.41■□□□□ 0.38
SCAP-215ENST00000545718 HAUS4Q9H6D7 363 aa17.41■□□□□ 0.38
SCAP-215ENST00000545718 DDX25Q9UHL0 483 aaKnown RBP17.41■□□□□ 0.38
SCAP-215ENST00000545718 ATP1A1P05023 1023 aaKnown RBP17.4■□□□□ 0.38
SCAP-215ENST00000545718 CACNB1Q02641 598 aaPredicted RBP17.4■□□□□ 0.38
SCAP-215ENST00000545718 NFIAQ12857 509 aa17.4■□□□□ 0.38
SCAP-215ENST00000545718 DDX12PQ92771 950 aa17.4■□□□□ 0.38
SCAP-215ENST00000545718 CCDC42Q96M95 316 aa17.4■□□□□ 0.38
SCAP-215ENST00000545718 MTMR9Q96QG7 549 aa17.4■□□□□ 0.38
SCAP-215ENST00000545718 FUT8Q9BYC5 575 aa17.4■□□□□ 0.38
SCAP-215ENST00000545718 DEF6Q9H4E7 631 aa17.4■□□□□ 0.38
SCAP-215ENST00000545718 AFF2P51816 1311 aa17.4■□□□□ 0.38
SCAP-215ENST00000545718 DDX60LQ5H9U9 1706 aaKnown RBP17.4■□□□□ 0.38
SCAP-215ENST00000545718 KRT86O43790 486 aa17.4■□□□□ 0.38
SCAP-215ENST00000545718 ZNF543Q08ER8 600 aa17.4■□□□□ 0.38
SCAP-215ENST00000545718 C2CD5Q86YS7 1000 aa17.4■□□□□ 0.38
SCAP-215ENST00000545718 CAGE1Q8TC20 777 aa17.4■□□□□ 0.38
SCAP-215ENST00000545718 MYO1AQ9UBC5 1043 aa17.4■□□□□ 0.38
SCAP-215ENST00000545718 RCCD1A6NED2 376 aa17.4■□□□□ 0.38
SCAP-215ENST00000545718 RASSF10A6NK89 507 aa17.4■□□□□ 0.38
SCAP-215ENST00000545718 USP17L15C9J2P7 530 aa17.4■□□□□ 0.38
SCAP-215ENST00000545718 USP17L13C9JLJ4 530 aa17.4■□□□□ 0.38
SCAP-215ENST00000545718 USP17L11C9JVI0 530 aa17.4■□□□□ 0.38
SCAP-215ENST00000545718 USP17L18D6R9N7 530 aa17.4■□□□□ 0.38
SCAP-215ENST00000545718 USP17L22D6RA61 530 aa17.4■□□□□ 0.38
SCAP-215ENST00000545718 USP17L17D6RBQ6 530 aa17.4■□□□□ 0.38
SCAP-215ENST00000545718 USP17L19D6RCP7 530 aa17.4■□□□□ 0.38
SCAP-215ENST00000545718 USP17L20D6RJB6 530 aa17.4■□□□□ 0.38
SCAP-215ENST00000545718 PPP1R11O60927 126 aaPredicted RBP17.4■□□□□ 0.38
SCAP-215ENST00000545718 ZBED6P86452 979 aa17.4■□□□□ 0.38
SCAP-215ENST00000545718 USP17L24Q0WX57 530 aa17.4■□□□□ 0.38
SCAP-215ENST00000545718 WHAMMP3Q1A5X7 153 aa17.4■□□□□ 0.38
SCAP-215ENST00000545718 SHROOM1Q2M3G4 852 aaPredicted RBP17.4■□□□□ 0.38
SCAP-215ENST00000545718 MIIPQ5JXC2 388 aa17.4■□□□□ 0.38
SCAP-215ENST00000545718 USP17L6PQ6QN14 398 aa17.4■□□□□ 0.38
SCAP-215ENST00000545718 HINFPQ9BQA5 517 aa17.4■□□□□ 0.38
SCAP-215ENST00000545718 ABCB6Q9NP58 842 aa17.4■□□□□ 0.38
SCAP-215ENST00000545718 JADE2Q9NQC1 790 aa17.4■□□□□ 0.38
SCAP-215ENST00000545718 PODXL2Q9NZ53 605 aa17.4■□□□□ 0.38
SCAP-215ENST00000545718 ESYT2A0FGR8 921 aa17.39■□□□□ 0.37
SCAP-215ENST00000545718 HLA-DOAP06340 250 aa17.39■□□□□ 0.37
SCAP-215ENST00000545718 VSNL1P62760 191 aa17.39■□□□□ 0.37
SCAP-215ENST00000545718 KIAA0825Q8IV33 1275 aa17.39■□□□□ 0.37
SCAP-215ENST00000545718 NUP58Q9BVL2 599 aa17.39■□□□□ 0.37
SCAP-215ENST00000545718 PSTPIP2Q9H939 334 aa17.39■□□□□ 0.37
SCAP-215ENST00000545718 DBNDD1Q9H9R9 158 aa17.39■□□□□ 0.37
SCAP-215ENST00000545718 PNMA6FA0A0J9YX94 578 aa17.39■□□□□ 0.37
SCAP-215ENST00000545718 POLRMTO00411 1230 aaKnown RBP17.39■□□□□ 0.37
SCAP-215ENST00000545718 SNAP25P60880 206 aa17.39■□□□□ 0.37
SCAP-215ENST00000545718 BRD3Q15059 726 aa17.39■□□□□ 0.37
SCAP-215ENST00000545718 SPA17Q15506 151 aa17.39■□□□□ 0.37
SCAP-215ENST00000545718 UNC13DQ70J99 1090 aa17.39■□□□□ 0.37
SCAP-215ENST00000545718 CCDC155Q8N6L0 562 aa17.39■□□□□ 0.37
SCAP-215ENST00000545718 CUL5Q93034 780 aa17.39■□□□□ 0.37
SCAP-215ENST00000545718 PCDHAC2Q9Y5I4 1007 aa17.39■□□□□ 0.37
SCAP-215ENST00000545718 MYH1P12882 1939 aa17.39■□□□□ 0.37
SCAP-215ENST00000545718 EPHB6O15197 1021 aa17.38■□□□□ 0.37
SCAP-215ENST00000545718 ERLIN1O75477 346 aa17.38■□□□□ 0.37
SCAP-215ENST00000545718 SMARCA1P28370 1054 aa17.38■□□□□ 0.37
SCAP-215ENST00000545718 GABPAQ06546 454 aa17.38■□□□□ 0.37
SCAP-215ENST00000545718 IKQ13123 557 aaPredicted RBP17.38■□□□□ 0.37
SCAP-215ENST00000545718 ZFPM1Q8IX07 1006 aa17.38■□□□□ 0.37
SCAP-215ENST00000545718 NELFCDQ8IXH7 590 aa17.38■□□□□ 0.37
SCAP-215ENST00000545718 SMCR8Q8TEV9 937 aaPredicted RBP17.38■□□□□ 0.37
SCAP-215ENST00000545718 COA1Q9GZY4 146 aa17.38■□□□□ 0.37
SCAP-215ENST00000545718 NDST4Q9H3R1 872 aa17.38■□□□□ 0.37
SCAP-215ENST00000545718 KCNQ5Q9NR82 932 aa17.38■□□□□ 0.37
SCAP-215ENST00000545718 PCDHA12Q9UN75 941 aa17.38■□□□□ 0.37
SCAP-215ENST00000545718 SAR1BQ9Y6B6 198 aa17.38■□□□□ 0.37
SCAP-215ENST00000545718 MRPL12P52815 198 aaKnown RBP17.38■□□□□ 0.37
SCAP-215ENST00000545718 ECM1Q16610 540 aa17.38■□□□□ 0.37
SCAP-215ENST00000545718 CDC42EP5Q6NZY7 148 aa17.38■□□□□ 0.37
SCAP-215ENST00000545718 RAD54LQ92698 747 aa17.38■□□□□ 0.37
SCAP-215ENST00000545718 CRAMP1Q96RY5 1269 aa17.38■□□□□ 0.37
SCAP-215ENST00000545718 KANSL2Q9H9L4 492 aa17.38■□□□□ 0.37
SCAP-215ENST00000545718 STK17AQ9UEE5 414 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms