RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 MRPS35P82673 323 aaKnown RBP9.34□□□□□ -0.91
ATXN3-216ENST00000545170 TBL3Q12788 808 aaKnown RBP9.34□□□□□ -0.91
ATXN3-216ENST00000545170 SPARCL1Q14515 664 aa9.34□□□□□ -0.91
ATXN3-216ENST00000545170 TRIM16LQ309B1 348 aa9.34□□□□□ -0.91
ATXN3-216ENST00000545170 B4GALNT2Q8NHY0 566 aa9.34□□□□□ -0.91
ATXN3-216ENST00000545170 IQCA1LA6NCM1 817 aa9.34□□□□□ -0.91
ATXN3-216ENST00000545170 FAM83GA6ND36 823 aa9.34□□□□□ -0.91
ATXN3-216ENST00000545170 NVLO15381 856 aaKnown RBP9.34□□□□□ -0.91
ATXN3-216ENST00000545170 HAUS5O94927 633 aa9.34□□□□□ -0.91
ATXN3-216ENST00000545170 COPB1P53618 953 aaKnown RBP9.34□□□□□ -0.91
ATXN3-216ENST00000545170 HEATR4Q86WZ0 1026 aa9.34□□□□□ -0.91
ATXN3-216ENST00000545170 CCDC103Q8IW40 242 aa9.34□□□□□ -0.91
ATXN3-216ENST00000545170 ZNF473Q8WTR7 871 aaKnown RBP9.34□□□□□ -0.91
ATXN3-216ENST00000545170 ZBTB40Q9NUA8 1239 aa9.34□□□□□ -0.91
ATXN3-216ENST00000545170 PA2G4Q9UQ80 394 aaKnown RBP9.34□□□□□ -0.91
ATXN3-216ENST00000545170 SMARCA2P51531 1590 aa9.34□□□□□ -0.91
ATXN3-216ENST00000545170 TMCC1O94876 653 aa9.34□□□□□ -0.91
ATXN3-216ENST00000545170 HLA-DOAP06340 250 aa9.34□□□□□ -0.91
ATXN3-216ENST00000545170 TXKP42681 527 aa9.34□□□□□ -0.91
ATXN3-216ENST00000545170 NDUFA8P51970 172 aa9.34□□□□□ -0.91
ATXN3-216ENST00000545170 CUL1Q13616 776 aa9.34□□□□□ -0.91
ATXN3-216ENST00000545170 CNGA3Q16281 694 aa9.34□□□□□ -0.91
ATXN3-216ENST00000545170 INAQ16352 499 aa9.34□□□□□ -0.91
ATXN3-216ENST00000545170 DTX3LQ8TDB6 740 aa9.34□□□□□ -0.91
ATXN3-216ENST00000545170 PPP1R1BQ9UD71 204 aaPredicted RBP9.34□□□□□ -0.91
ATXN3-216ENST00000545170 COBLO75128 1261 aa9.34□□□□□ -0.91
ATXN3-216ENST00000545170 ATP6V1E1P36543 226 aa9.34□□□□□ -0.91
ATXN3-216ENST00000545170 GUCY1A3Q02108 690 aa9.34□□□□□ -0.91
ATXN3-216ENST00000545170 ZNF827Q17R98 1081 aa9.34□□□□□ -0.91
ATXN3-216ENST00000545170 HDDC2Q7Z4H3 204 aa9.34□□□□□ -0.91
ATXN3-216ENST00000545170 MCUQ8NE86 351 aa9.34□□□□□ -0.91
ATXN3-216ENST00000545170 TLK1Q9UKI8 766 aa9.34□□□□□ -0.91
ATXN3-216ENST00000545170 MAGEB6P1A0A0J9YX57 407 aa9.34□□□□□ -0.91
ATXN3-216ENST00000545170 ECEL1O95672 775 aa9.34□□□□□ -0.91
ATXN3-216ENST00000545170 FTCDO95954 541 aa9.34□□□□□ -0.91
ATXN3-216ENST00000545170 CCND1P24385 295 aa9.34□□□□□ -0.91
ATXN3-216ENST00000545170 ZC3H12BQ5HYM0 836 aaKnown RBP9.34□□□□□ -0.91
ATXN3-216ENST00000545170 SPATA1Q5VX52 437 aa9.34□□□□□ -0.91
ATXN3-216ENST00000545170 CLMNQ96JQ2 1002 aa9.34□□□□□ -0.91
ATXN3-216ENST00000545170 ZFYVE19Q96K21 471 aa9.34□□□□□ -0.91
ATXN3-216ENST00000545170 SLC40A1Q9NP59 571 aa9.34□□□□□ -0.91
ATXN3-216ENST00000545170 PARP3Q9Y6F1 533 aa9.34□□□□□ -0.91
ATXN3-216ENST00000545170 TRHP20396 242 aaPredicted RBP9.34□□□□□ -0.91
ATXN3-216ENST00000545170 SLC8A3P57103 927 aa9.34□□□□□ -0.91
ATXN3-216ENST00000545170 CORO7P57737 925 aa9.34□□□□□ -0.91
ATXN3-216ENST00000545170 CABP7Q86V35 215 aa9.34□□□□□ -0.91
ATXN3-216ENST00000545170 PLD3Q8IV08 490 aa9.34□□□□□ -0.91
ATXN3-216ENST00000545170 DDHD1Q8NEL9 900 aa9.34□□□□□ -0.91
ATXN3-216ENST00000545170 DNAJC9Q8WXX5 260 aa9.34□□□□□ -0.91
ATXN3-216ENST00000545170 AP1M1Q9BXS5 423 aa9.34□□□□□ -0.91
ATXN3-216ENST00000545170 ATF3P18847 181 aa9.33□□□□□ -0.92
ATXN3-216ENST00000545170 PAX7P23759 505 aa9.33□□□□□ -0.92
ATXN3-216ENST00000545170 EPHB1P54762 984 aa9.33□□□□□ -0.92
ATXN3-216ENST00000545170 MED21Q13503 144 aa9.33□□□□□ -0.92
ATXN3-216ENST00000545170 GIPC2Q8TF65 315 aa9.33□□□□□ -0.92
ATXN3-216ENST00000545170 CFAP36Q96G28 342 aa9.33□□□□□ -0.92
ATXN3-216ENST00000545170 SNX25Q9H3E2 840 aa9.33□□□□□ -0.92
ATXN3-216ENST00000545170 MRPL44Q9H9J2 332 aaKnown RBP9.33□□□□□ -0.92
ATXN3-216ENST00000545170 PRR23D1E9PI22 279 aaPredicted RBP9.33□□□□□ -0.92
ATXN3-216ENST00000545170 H0Y626 953 aa9.33□□□□□ -0.92
ATXN3-216ENST00000545170 PFKFB2O60825 505 aa9.33□□□□□ -0.92
ATXN3-216ENST00000545170 TRIM37O94972 964 aa9.33□□□□□ -0.92
ATXN3-216ENST00000545170 DLGAP3O95886 979 aa9.33□□□□□ -0.92
ATXN3-216ENST00000545170 PRR23D2P0DMB1 279 aaPredicted RBP9.33□□□□□ -0.92
ATXN3-216ENST00000545170 RAB44Q7Z6P3 723 aaPredicted RBP9.33□□□□□ -0.92
ATXN3-216ENST00000545170 DIS3L2Q8IYB7 885 aaKnown RBP9.33□□□□□ -0.92
ATXN3-216ENST00000545170 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.33□□□□□ -0.92
ATXN3-216ENST00000545170 PBKQ96KB5 322 aa9.33□□□□□ -0.92
ATXN3-216ENST00000545170 TGS1Q96RS0 853 aaKnown RBP9.33□□□□□ -0.92
ATXN3-216ENST00000545170 EPN3Q9H201 632 aa9.33□□□□□ -0.92
ATXN3-216ENST00000545170 SUCLA2Q9P2R7 463 aaPredicted RBP9.33□□□□□ -0.92
ATXN3-216ENST00000545170 GGT7Q9UJ14 662 aa9.33□□□□□ -0.92
ATXN3-216ENST00000545170 RNF103-CHMP3A0A140T963 221 aa9.33□□□□□ -0.92
ATXN3-216ENST00000545170 STAM2O75886 525 aa9.33□□□□□ -0.92
ATXN3-216ENST00000545170 EIF2B2P49770 351 aaKnown RBP9.33□□□□□ -0.92
ATXN3-216ENST00000545170 APLFQ8IW19 511 aaPredicted RBP9.33□□□□□ -0.92
ATXN3-216ENST00000545170 HIC2Q96JB3 615 aa9.33□□□□□ -0.92
ATXN3-216ENST00000545170 EPC1Q9H2F5 836 aa9.33□□□□□ -0.92
ATXN3-216ENST00000545170 ACSL3O95573 720 aa9.33□□□□□ -0.92
ATXN3-216ENST00000545170 GSPT1P15170 499 aaKnown RBP9.33□□□□□ -0.92
ATXN3-216ENST00000545170 CA4P22748 312 aa9.33□□□□□ -0.92
ATXN3-216ENST00000545170 BTKQ06187 659 aa9.33□□□□□ -0.92
ATXN3-216ENST00000545170 HERC4Q5GLZ8 1057 aaPredicted RBP9.33□□□□□ -0.92
ATXN3-216ENST00000545170 TEDDM1Q5T9Z0 273 aa9.33□□□□□ -0.92
ATXN3-216ENST00000545170 CC2D2BQ6DHV5 1058 aa9.33□□□□□ -0.92
ATXN3-216ENST00000545170 TXNDC2Q86VQ3 553 aa9.33□□□□□ -0.92
ATXN3-216ENST00000545170 IBTKQ9P2D0 1353 aaPredicted RBP9.33□□□□□ -0.92
ATXN3-216ENST00000545170 TSC22D2O75157 780 aa9.33□□□□□ -0.92
ATXN3-216ENST00000545170 E2F6O75461 281 aa9.33□□□□□ -0.92
ATXN3-216ENST00000545170 DR1Q01658 176 aa9.33□□□□□ -0.92
ATXN3-216ENST00000545170 KCNA1Q09470 495 aa9.33□□□□□ -0.92
ATXN3-216ENST00000545170 EPM2AIP1Q7L775 607 aaPredicted RBP9.33□□□□□ -0.92
ATXN3-216ENST00000545170 SPDYE1Q8NFV5 336 aaPredicted RBP9.33□□□□□ -0.92
ATXN3-216ENST00000545170 CHMP6Q96FZ7 201 aa9.33□□□□□ -0.92
ATXN3-216ENST00000545170 COG4Q9H9E3 785 aa9.33□□□□□ -0.92
ATXN3-216ENST00000545170 PARVBQ9HBI1 364 aa9.33□□□□□ -0.92
ATXN3-216ENST00000545170 TMEM191CA6NGB0 347 aa9.32□□□□□ -0.92
ATXN3-216ENST00000545170 B4DLN1 442 aa9.32□□□□□ -0.92
ATXN3-216ENST00000545170 SKAP2O75563 359 aaPredicted RBP9.32□□□□□ -0.92
ATXN3-216ENST00000545170 TSPAN9O75954 239 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms