RNA–Protein interactions for RNA: ENST00000545046.5

CHFR-224, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,186 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-224ENST00000545046 R3HDM1Q15032 1099 aaKnown RBP18.66■□□□□ 0.58
CHFR-224ENST00000545046 KIAA1755Q5JYT7 1200 aa18.66■□□□□ 0.58
CHFR-224ENST00000545046 SPECC1LQ69YQ0 1117 aa18.66■□□□□ 0.58
CHFR-224ENST00000545046 CCDC112Q8NEF3 446 aa18.66■□□□□ 0.58
CHFR-224ENST00000545046 ANKRD20A12PQ8NF67 263 aa18.66■□□□□ 0.58
CHFR-224ENST00000545046 PNMA5Q96PV4 448 aa18.66■□□□□ 0.58
CHFR-224ENST00000545046 LRRC27Q9C0I9 530 aa18.66■□□□□ 0.58
CHFR-224ENST00000545046 MAPK8IP1Q9UQF2 711 aa18.66■□□□□ 0.58
CHFR-224ENST00000545046 ARHGAP4P98171 946 aa18.65■□□□□ 0.58
CHFR-224ENST00000545046 PDE4DQ08499 809 aa18.65■□□□□ 0.58
CHFR-224ENST00000545046 RASA3Q14644 834 aa18.65■□□□□ 0.58
CHFR-224ENST00000545046 LARP4BQ92615 738 aaKnown RBP18.65■□□□□ 0.58
CHFR-224ENST00000545046 H7C1D1 291 aa18.65■□□□□ 0.58
CHFR-224ENST00000545046 PSMA7O14818 248 aa18.65■□□□□ 0.58
CHFR-224ENST00000545046 TPM2P07951 284 aa18.65■□□□□ 0.58
CHFR-224ENST00000545046 FAM160B2Q86V87 743 aa18.65■□□□□ 0.58
CHFR-224ENST00000545046 SLFN12Q8IYM2 578 aa18.65■□□□□ 0.58
CHFR-224ENST00000545046 PRIMPOLQ96LW4 560 aa18.65■□□□□ 0.58
CHFR-224ENST00000545046 BLOC1S4Q9NUP1 217 aa18.65■□□□□ 0.58
CHFR-224ENST00000545046 LTBP3Q9NS15 1303 aa18.64■□□□□ 0.57
CHFR-224ENST00000545046 PLA2G6O60733 806 aa18.64■□□□□ 0.57
CHFR-224ENST00000545046 COBLO75128 1261 aa18.64■□□□□ 0.57
CHFR-224ENST00000545046 PPP1R2P41236 205 aa18.64■□□□□ 0.57
CHFR-224ENST00000545046 TBX2Q13207 712 aaPredicted RBP18.64■□□□□ 0.57
CHFR-224ENST00000545046 ZYXQ15942 572 aaKnown RBP18.64■□□□□ 0.57
CHFR-224ENST00000545046 TEX2Q8IWB9 1127 aa18.64■□□□□ 0.57
CHFR-224ENST00000545046 MBOAT7Q96N66 472 aa18.64■□□□□ 0.57
CHFR-224ENST00000545046 KCND1Q9NSA2 647 aa18.64■□□□□ 0.57
CHFR-224ENST00000545046 KCNJ6P48051 423 aa18.64■□□□□ 0.57
CHFR-224ENST00000545046 MCM6Q14566 821 aa18.64■□□□□ 0.57
CHFR-224ENST00000545046 PTPN21Q16825 1174 aa18.64■□□□□ 0.57
CHFR-224ENST00000545046 APTXQ7Z2E3 356 aaKnown RBP18.64■□□□□ 0.57
CHFR-224ENST00000545046 RAD54LQ92698 747 aa18.64■□□□□ 0.57
CHFR-224ENST00000545046 KIFC2Q96AC6 838 aa18.64■□□□□ 0.57
CHFR-224ENST00000545046 KCNMB3Q9NPA1 279 aa18.64■□□□□ 0.57
CHFR-224ENST00000545046 ADD3Q9UEY8 706 aaKnown RBP18.64■□□□□ 0.57
CHFR-224ENST00000545046 KDM3AQ9Y4C1 1321 aa18.63■□□□□ 0.57
CHFR-224ENST00000545046 SREBF1P36956 1147 aa18.63■□□□□ 0.57
CHFR-224ENST00000545046 TMEM119Q4V9L6 283 aa18.63■□□□□ 0.57
CHFR-224ENST00000545046 CNNM4Q6P4Q7 775 aa18.63■□□□□ 0.57
CHFR-224ENST00000545046 CRYGNQ8WXF5 182 aa18.63■□□□□ 0.57
CHFR-224ENST00000545046 DHTKD1Q96HY7 919 aaPredicted RBP18.63■□□□□ 0.57
CHFR-224ENST00000545046 C16orf45Q96MC5 204 aaPredicted RBP18.63■□□□□ 0.57
CHFR-224ENST00000545046 NUDT12Q9BQG2 462 aa18.63■□□□□ 0.57
CHFR-224ENST00000545046 NT5C3AQ9H0P0 336 aa18.63■□□□□ 0.57
CHFR-224ENST00000545046 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.63■□□□□ 0.57
CHFR-224ENST00000545046 LIMA1Q9UHB6 759 aaKnown RBP18.63■□□□□ 0.57
CHFR-224ENST00000545046 FEM1BQ9UK73 627 aa18.63■□□□□ 0.57
CHFR-224ENST00000545046 SMCHD1A6NHR9 2005 aa18.62■□□□□ 0.57
CHFR-224ENST00000545046 PIK3CDO00329 1044 aa18.62■□□□□ 0.57
CHFR-224ENST00000545046 SLC26A4O43511 780 aa18.62■□□□□ 0.57
CHFR-224ENST00000545046 GMPSP49915 693 aaPredicted RBP18.62■□□□□ 0.57
CHFR-224ENST00000545046 Q4G0T1 1027 aa18.62■□□□□ 0.57
CHFR-224ENST00000545046 CCDC174Q6PII3 467 aa18.62■□□□□ 0.57
CHFR-224ENST00000545046 CCAR2Q8N163 923 aaKnown RBP18.62■□□□□ 0.57
CHFR-224ENST00000545046 RANBP17Q9H2T7 1088 aaKnown RBP18.62■□□□□ 0.57
CHFR-224ENST00000545046 GJA3Q9Y6H8 435 aa18.62■□□□□ 0.57
CHFR-224ENST00000545046 PVALEFA0A1B0GWK0 134 aa18.62■□□□□ 0.57
CHFR-224ENST00000545046 TBX3O15119 743 aa18.62■□□□□ 0.57
CHFR-224ENST00000545046 CCT6AP40227 531 aaKnown RBP18.62■□□□□ 0.57
CHFR-224ENST00000545046 MICALL2Q8IY33 904 aa18.62■□□□□ 0.57
CHFR-224ENST00000545046 GJA10Q969M2 543 aa18.62■□□□□ 0.57
CHFR-224ENST00000545046 P2RX7Q99572 595 aaKnown RBP18.62■□□□□ 0.57
CHFR-224ENST00000545046 BICDL2A1A5D9 508 aa18.61■□□□□ 0.57
CHFR-224ENST00000545046 KCNJ18B7U540 433 aa18.61■□□□□ 0.57
CHFR-224ENST00000545046 OPLAHO14841 1288 aa18.61■□□□□ 0.57
CHFR-224ENST00000545046 TEX33O43247 280 aa18.61■□□□□ 0.57
CHFR-224ENST00000545046 TNNT1P13805 278 aa18.61■□□□□ 0.57
CHFR-224ENST00000545046 HOXA13P31271 388 aaPredicted RBP18.61■□□□□ 0.57
CHFR-224ENST00000545046 RASSF7Q02833 373 aa18.61■□□□□ 0.57
CHFR-224ENST00000545046 KCNJ12Q14500 433 aa18.61■□□□□ 0.57
CHFR-224ENST00000545046 KRT31Q15323 416 aa18.61■□□□□ 0.57
CHFR-224ENST00000545046 PRR16Q569H4 304 aa18.61■□□□□ 0.57
CHFR-224ENST00000545046 TCP11X2Q5H9J9 407 aa18.61■□□□□ 0.57
CHFR-224ENST00000545046 FEZ1Q99689 392 aa18.61■□□□□ 0.57
CHFR-224ENST00000545046 SGIP1Q9BQI5 828 aa18.61■□□□□ 0.57
CHFR-224ENST00000545046 TMX1Q9H3N1 280 aa18.61■□□□□ 0.57
CHFR-224ENST00000545046 CNOT7Q9UIV1 285 aaKnown RBP18.61■□□□□ 0.57
CHFR-224ENST00000545046 SCAF8Q9UPN6 1271 aaKnown RBP18.61■□□□□ 0.57
CHFR-224ENST00000545046 MRPL11Q9Y3B7 192 aaKnown RBP18.61■□□□□ 0.57
CHFR-224ENST00000545046 MYMKA6NI61 221 aa18.61■□□□□ 0.57
CHFR-224ENST00000545046 LRRC10BA6NIK2 292 aa18.61■□□□□ 0.57
CHFR-224ENST00000545046 PHF20L1A8MW92 1017 aa18.61■□□□□ 0.57
CHFR-224ENST00000545046 HYIQ5T013 277 aa18.61■□□□□ 0.57
CHFR-224ENST00000545046 UNC13DQ70J99 1090 aa18.61■□□□□ 0.57
CHFR-224ENST00000545046 CREBRFQ8IUR6 639 aa18.61■□□□□ 0.57
CHFR-224ENST00000545046 NOC3LQ8WTT2 800 aaKnown RBP18.61■□□□□ 0.57
CHFR-224ENST00000545046 TRIM47Q96LD4 638 aa18.61■□□□□ 0.57
CHFR-224ENST00000545046 TRMT1Q9NXH9 659 aaKnown RBP18.61■□□□□ 0.57
CHFR-224ENST00000545046 TRIM49BA6NDI0 452 aa18.6■□□□□ 0.57
CHFR-224ENST00000545046 FZD9O00144 591 aa18.6■□□□□ 0.57
CHFR-224ENST00000545046 N4BP3O15049 544 aa18.6■□□□□ 0.57
CHFR-224ENST00000545046 EGFRP00533 1210 aa18.6■□□□□ 0.57
CHFR-224ENST00000545046 TAL1P17542 331 aaPredicted RBP18.6■□□□□ 0.57
CHFR-224ENST00000545046 HOXA7P31268 230 aaPredicted RBP18.6■□□□□ 0.57
CHFR-224ENST00000545046 ZNF76P36508 570 aa18.6■□□□□ 0.57
CHFR-224ENST00000545046 PPFIBP1Q86W92 1011 aa18.6■□□□□ 0.57
CHFR-224ENST00000545046 TEPSINQ96N21 525 aa18.6■□□□□ 0.57
CHFR-224ENST00000545046 ZNF341Q9BYN7 854 aa18.6■□□□□ 0.57
CHFR-224ENST00000545046 GLIS2Q9BZE0 524 aaPredicted RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms