RNA–Protein interactions for RNA: ENST00000544999.2

HOXD8-204, Transcript of homeobox D8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HOXD8, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-204ENST00000544999 MYL10Q9BUA6 226 aa19.64■□□□□ 0.73
HOXD8-204ENST00000544999 MROH7Q68CQ1 1323 aa19.64■□□□□ 0.73
HOXD8-204ENST00000544999 BAZ2BQ9UIF8 2168 aaKnown RBP19.64■□□□□ 0.73
HOXD8-204ENST00000544999 PNMA6FA0A0J9YX94 578 aa19.63■□□□□ 0.73
HOXD8-204ENST00000544999 NKRFO15226 690 aaKnown RBP eCLIP19.63■□□□□ 0.73
HOXD8-204ENST00000544999 PQBP1O60828 265 aaKnown RBP19.63■□□□□ 0.73
HOXD8-204ENST00000544999 CABYRO75952 493 aa19.63■□□□□ 0.73
HOXD8-204ENST00000544999 CALM1P0DP23 149 aa19.63■□□□□ 0.73
HOXD8-204ENST00000544999 CALM2P0DP24 149 aa19.63■□□□□ 0.73
HOXD8-204ENST00000544999 CALM3P0DP25 149 aa19.63■□□□□ 0.73
HOXD8-204ENST00000544999 PTGS1P23219 599 aa19.63■□□□□ 0.73
HOXD8-204ENST00000544999 SMARCA1P28370 1054 aa19.63■□□□□ 0.73
HOXD8-204ENST00000544999 GNAQP50148 359 aa19.63■□□□□ 0.73
HOXD8-204ENST00000544999 SH3RF1Q7Z6J0 888 aa19.63■□□□□ 0.73
HOXD8-204ENST00000544999 SCFD2Q8WU76 684 aa19.63■□□□□ 0.73
HOXD8-204ENST00000544999 VTI1AQ96AJ9 217 aa19.63■□□□□ 0.73
HOXD8-204ENST00000544999 IWS1Q96ST2 819 aa19.63■□□□□ 0.73
HOXD8-204ENST00000544999 RMDN3Q96TC7 470 aa19.63■□□□□ 0.73
HOXD8-204ENST00000544999 LZTS2Q9BRK4 669 aa19.63■□□□□ 0.73
HOXD8-204ENST00000544999 SPZ1Q9BXG8 430 aa19.63■□□□□ 0.73
HOXD8-204ENST00000544999 TRIM43BA6NCK2 446 aa19.62■□□□□ 0.73
HOXD8-204ENST00000544999 DCDC2CA8MYV0 355 aa19.62■□□□□ 0.73
HOXD8-204ENST00000544999 ARVCFO00192 962 aa19.62■□□□□ 0.73
HOXD8-204ENST00000544999 CDK7P50613 346 aa19.62■□□□□ 0.73
HOXD8-204ENST00000544999 PPP2R5BQ15173 497 aa19.62■□□□□ 0.73
HOXD8-204ENST00000544999 ARHGEF16Q5VV41 709 aa19.62■□□□□ 0.73
HOXD8-204ENST00000544999 TRIM43Q96BQ3 446 aaPredicted RBP19.62■□□□□ 0.73
HOXD8-204ENST00000544999 NEK1Q96PY6 1258 aa19.62■□□□□ 0.73
HOXD8-204ENST00000544999 KIAA0355O15063 1070 aa19.61■□□□□ 0.73
HOXD8-204ENST00000544999 KRT32Q14532 448 aa19.61■□□□□ 0.73
HOXD8-204ENST00000544999 TTLL4Q14679 1199 aa19.61■□□□□ 0.73
HOXD8-204ENST00000544999 STXBP2Q15833 593 aa19.61■□□□□ 0.73
HOXD8-204ENST00000544999 CXCL17Q6UXB2 119 aa19.61■□□□□ 0.73
HOXD8-204ENST00000544999 SGMS1Q86VZ5 419 aa19.61■□□□□ 0.73
HOXD8-204ENST00000544999 OR6J1Q8NGC5 347 aa19.61■□□□□ 0.73
HOXD8-204ENST00000544999 LRRC2Q9BYS8 371 aa19.61■□□□□ 0.73
HOXD8-204ENST00000544999 PXMP2Q9NR77 195 aa19.61■□□□□ 0.73
HOXD8-204ENST00000544999 EIF2AK2P19525 551 aaKnown RBP19.6■□□□□ 0.73
HOXD8-204ENST00000544999 FAAP100Q0VG06 881 aa19.6■□□□□ 0.73
HOXD8-204ENST00000544999 ERICH6BQ5W0A0 696 aa19.6■□□□□ 0.73
HOXD8-204ENST00000544999 RASEFQ8IZ41 740 aa19.6■□□□□ 0.73
HOXD8-204ENST00000544999 BADQ92934 168 aa19.6■□□□□ 0.73
HOXD8-204ENST00000544999 RRP36Q96EU6 259 aaKnown RBP19.6■□□□□ 0.73
HOXD8-204ENST00000544999 SEZ6LQ9BYH1 1024 aa19.6■□□□□ 0.73
HOXD8-204ENST00000544999 TMEM39AQ9NV64 488 aa19.6■□□□□ 0.73
HOXD8-204ENST00000544999 SLC12A7Q9Y666 1083 aa19.6■□□□□ 0.73
HOXD8-204ENST00000544999 KIAA1217Q5T5P2 1943 aa19.6■□□□□ 0.73
HOXD8-204ENST00000544999 GCOM1H8Y6P7 765 aaPredicted RBP19.59■□□□□ 0.73
HOXD8-204ENST00000544999 NR3C2P08235 984 aa19.59■□□□□ 0.73
HOXD8-204ENST00000544999 POLR2MP0CAP2 368 aa19.59■□□□□ 0.73
HOXD8-204ENST00000544999 TXNP10599 105 aaKnown RBP19.59■□□□□ 0.73
HOXD8-204ENST00000544999 CPT1AP50416 773 aa19.59■□□□□ 0.73
HOXD8-204ENST00000544999 EXOSC10Q01780 885 aaKnown RBP19.59■□□□□ 0.73
HOXD8-204ENST00000544999 LRIT3Q3SXY7 679 aa19.59■□□□□ 0.73
HOXD8-204ENST00000544999 DHX32Q7L7V1 743 aaKnown RBP19.59■□□□□ 0.73
HOXD8-204ENST00000544999 SLC43A3Q8NBI5 491 aa19.59■□□□□ 0.73
HOXD8-204ENST00000544999 KCNB2Q92953 911 aa19.59■□□□□ 0.73
HOXD8-204ENST00000544999 POLR3EQ9NVU0 708 aa19.59■□□□□ 0.73
HOXD8-204ENST00000544999 TLR3O15455 904 aaKnown RBP19.58■□□□□ 0.72
HOXD8-204ENST00000544999 EIF3JO75822 258 aaKnown RBP19.58■□□□□ 0.72
HOXD8-204ENST00000544999 ARIH2O95376 493 aa19.58■□□□□ 0.72
HOXD8-204ENST00000544999 PLEKHA8P1O95397 391 aa19.58■□□□□ 0.72
HOXD8-204ENST00000544999 RAG1P15918 1043 aa19.58■□□□□ 0.72
HOXD8-204ENST00000544999 RXRAP19793 462 aa19.58■□□□□ 0.72
HOXD8-204ENST00000544999 ITGA7Q13683 1181 aa19.58■□□□□ 0.72
HOXD8-204ENST00000544999 ADCK5Q3MIX3 580 aa19.58■□□□□ 0.72
HOXD8-204ENST00000544999 BRDTQ58F21 947 aaPredicted RBP19.58■□□□□ 0.72
HOXD8-204ENST00000544999 CCDC62Q6P9F0 684 aa19.58■□□□□ 0.72
HOXD8-204ENST00000544999 SYNE3Q6ZMZ3 975 aa19.58■□□□□ 0.72
HOXD8-204ENST00000544999 FAM126BQ8IXS8 530 aa19.58■□□□□ 0.72
HOXD8-204ENST00000544999 SRBD1Q8N5C6 995 aaKnown RBP19.58■□□□□ 0.72
HOXD8-204ENST00000544999 PIBF1Q8WXW3 757 aa19.58■□□□□ 0.72
HOXD8-204ENST00000544999 COPS5Q92905 334 aa19.58■□□□□ 0.72
HOXD8-204ENST00000544999 PDCD2LQ9BRP1 358 aa19.58■□□□□ 0.72
HOXD8-204ENST00000544999 PPP4R2Q9NY27 417 aa19.58■□□□□ 0.72
HOXD8-204ENST00000544999 SEC63Q9UGP8 760 aaKnown RBP19.58■□□□□ 0.72
HOXD8-204ENST00000544999 SOX1O00570 391 aaPredicted RBP19.57■□□□□ 0.72
HOXD8-204ENST00000544999 HMGB1P09429 215 aaKnown RBP19.57■□□□□ 0.72
HOXD8-204ENST00000544999 ITGB8P26012 769 aa19.57■□□□□ 0.72
HOXD8-204ENST00000544999 HOXA13P31271 388 aaPredicted RBP19.57■□□□□ 0.72
HOXD8-204ENST00000544999 SEPT14Q6ZU15 432 aa19.57■□□□□ 0.72
HOXD8-204ENST00000544999 FANCBQ8NB91 859 aa19.57■□□□□ 0.72
HOXD8-204ENST00000544999 TBX21Q9UL17 535 aa19.57■□□□□ 0.72
HOXD8-204ENST00000544999 A6NJR5 290 aa19.56■□□□□ 0.72
HOXD8-204ENST00000544999 REC8O95072 547 aa19.56■□□□□ 0.72
HOXD8-204ENST00000544999 CD4P01730 458 aa19.56■□□□□ 0.72
HOXD8-204ENST00000544999 HSPA4P34932 840 aa19.56■□□□□ 0.72
HOXD8-204ENST00000544999 PURAQ00577 322 aaKnown RBP19.56■□□□□ 0.72
HOXD8-204ENST00000544999 PGM5Q15124 567 aa19.56■□□□□ 0.72
HOXD8-204ENST00000544999 APOA5Q6Q788 366 aa19.56■□□□□ 0.72
HOXD8-204ENST00000544999 MICU3Q86XE3 530 aa19.56■□□□□ 0.72
HOXD8-204ENST00000544999 RAB11FIP4Q86YS3 637 aa19.56■□□□□ 0.72
HOXD8-204ENST00000544999 GRIN2DO15399 1336 aa19.55■□□□□ 0.72
HOXD8-204ENST00000544999 KPNA6O60684 536 aa19.55■□□□□ 0.72
HOXD8-204ENST00000544999 TIMP1P01033 207 aa19.55■□□□□ 0.72
HOXD8-204ENST00000544999 GH1P01241 217 aa19.55■□□□□ 0.72
HOXD8-204ENST00000544999 MYL3P08590 195 aa19.55■□□□□ 0.72
HOXD8-204ENST00000544999 LY6KQ17RY6 165 aa19.55■□□□□ 0.72
HOXD8-204ENST00000544999 TMTC3Q6ZXV5 915 aa19.55■□□□□ 0.72
HOXD8-204ENST00000544999 LRCH3Q96II8 777 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms