RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 MCM3APO60318 1980 aa16.59■□□□□ 0.25
TNFRSF1A-216ENST00000543995 ASB14A6NK59 587 aa16.59■□□□□ 0.25
TNFRSF1A-216ENST00000543995 B4DLN1 442 aa16.59■□□□□ 0.25
TNFRSF1A-216ENST00000543995 EIF2AK2P19525 551 aaKnown RBP16.59■□□□□ 0.25
TNFRSF1A-216ENST00000543995 SLC9C1Q4G0N8 1177 aa16.59■□□□□ 0.25
TNFRSF1A-216ENST00000543995 JAKMIP3Q5VZ66 844 aa16.59■□□□□ 0.25
TNFRSF1A-216ENST00000543995 MFSD14CQ5VZR4 134 aa16.59■□□□□ 0.25
TNFRSF1A-216ENST00000543995 BLIDQ8IZY5 108 aa16.59■□□□□ 0.25
TNFRSF1A-216ENST00000543995 SPRYD3Q8NCJ5 442 aa16.59■□□□□ 0.25
TNFRSF1A-216ENST00000543995 FGD4Q96M96 766 aa16.59■□□□□ 0.25
TNFRSF1A-216ENST00000543995 TINF2Q9BSI4 451 aa16.59■□□□□ 0.25
TNFRSF1A-216ENST00000543995 BRMS1Q9HCU9 246 aa16.59■□□□□ 0.25
TNFRSF1A-216ENST00000543995 PXMP2Q9NR77 195 aa16.59■□□□□ 0.25
TNFRSF1A-216ENST00000543995 TSHZ2Q9NRE2 1034 aa16.59■□□□□ 0.25
TNFRSF1A-216ENST00000543995 TMEM260Q9NX78 707 aa16.59■□□□□ 0.25
TNFRSF1A-216ENST00000543995 ASTN1O14525 1302 aa16.58■□□□□ 0.24
TNFRSF1A-216ENST00000543995 HMGCRP04035 888 aa16.58■□□□□ 0.24
TNFRSF1A-216ENST00000543995 CYP2C19P33261 490 aa16.58■□□□□ 0.24
TNFRSF1A-216ENST00000543995 ANP32AP39687 249 aaKnown RBP16.58■□□□□ 0.24
TNFRSF1A-216ENST00000543995 KRT40Q6A162 431 aa16.58■□□□□ 0.24
TNFRSF1A-216ENST00000543995 ARMCX2Q7L311 632 aa16.58■□□□□ 0.24
TNFRSF1A-216ENST00000543995 RASGRP4Q8TDF6 673 aa16.58■□□□□ 0.24
TNFRSF1A-216ENST00000543995 PGBD1Q96JS3 809 aa16.58■□□□□ 0.24
TNFRSF1A-216ENST00000543995 EHMT1Q9H9B1 1298 aa16.58■□□□□ 0.24
TNFRSF1A-216ENST00000543995 PCDHA6Q9UN73 950 aa16.58■□□□□ 0.24
TNFRSF1A-216ENST00000543995 PCDHA8Q9Y5H6 950 aa16.58■□□□□ 0.24
TNFRSF1A-216ENST00000543995 ADAMTS3O15072 1205 aa16.57■□□□□ 0.24
TNFRSF1A-216ENST00000543995 FOSP01100 380 aaPredicted RBP16.57■□□□□ 0.24
TNFRSF1A-216ENST00000543995 KRT2P35908 639 aa16.57■□□□□ 0.24
TNFRSF1A-216ENST00000543995 CLK2P49760 499 aaKnown RBP16.57■□□□□ 0.24
TNFRSF1A-216ENST00000543995 UBXN2AP68543 259 aa16.57■□□□□ 0.24
TNFRSF1A-216ENST00000543995 PDE4DQ08499 809 aa16.57■□□□□ 0.24
TNFRSF1A-216ENST00000543995 AP3B2Q13367 1082 aa16.57■□□□□ 0.24
TNFRSF1A-216ENST00000543995 SAFBQ15424 915 aaKnown RBP eCLIP16.57■□□□□ 0.24
TNFRSF1A-216ENST00000543995 MCTP2Q6DN12 878 aa16.57■□□□□ 0.24
TNFRSF1A-216ENST00000543995 MAMDC4Q6UXC1 1216 aa16.57■□□□□ 0.24
TNFRSF1A-216ENST00000543995 MSL3Q8N5Y2 521 aaKnown RBP16.57■□□□□ 0.24
TNFRSF1A-216ENST00000543995 DAGLBQ8NCG7 672 aa16.57■□□□□ 0.24
TNFRSF1A-216ENST00000543995 SH3TC2Q8TF17 1288 aa16.57■□□□□ 0.24
TNFRSF1A-216ENST00000543995 ANO3Q9BYT9 981 aa16.57■□□□□ 0.24
TNFRSF1A-216ENST00000543995 MCOLN1Q9GZU1 580 aa16.57■□□□□ 0.24
TNFRSF1A-216ENST00000543995 DDX49Q9Y6V7 483 aaKnown RBP16.57■□□□□ 0.24
TNFRSF1A-216ENST00000543995 SYNGAP1Q96PV0 1343 aa16.57■□□□□ 0.24
TNFRSF1A-216ENST00000543995 LOC102724159A0A0B4J2E5 919 aa16.56■□□□□ 0.24
TNFRSF1A-216ENST00000543995 H3BQV1 296 aa16.56■□□□□ 0.24
TNFRSF1A-216ENST00000543995 MMP1P03956 469 aa16.56■□□□□ 0.24
TNFRSF1A-216ENST00000543995 MYCLP12524 364 aaPredicted RBP16.56■□□□□ 0.24
TNFRSF1A-216ENST00000543995 PGM5Q15124 567 aa16.56■□□□□ 0.24
TNFRSF1A-216ENST00000543995 PWP2Q15269 919 aaKnown RBP16.56■□□□□ 0.24
TNFRSF1A-216ENST00000543995 IFFO2Q5TF58 517 aa16.56■□□□□ 0.24
TNFRSF1A-216ENST00000543995 LARP1BQ659C4 914 aaKnown RBP16.56■□□□□ 0.24
TNFRSF1A-216ENST00000543995 FBXO18Q8NFZ0 1043 aa16.56■□□□□ 0.24
TNFRSF1A-216ENST00000543995 IWS1Q96ST2 819 aa16.56■□□□□ 0.24
TNFRSF1A-216ENST00000543995 CNPY2Q9Y2B0 182 aa16.56■□□□□ 0.24
TNFRSF1A-216ENST00000543995 INHAP05111 366 aa16.55■□□□□ 0.24
TNFRSF1A-216ENST00000543995 TRIM32Q13049 653 aa16.55■□□□□ 0.24
TNFRSF1A-216ENST00000543995 NPY5RQ15761 445 aa16.55■□□□□ 0.24
TNFRSF1A-216ENST00000543995 EEPD1Q7L9B9 569 aa16.55■□□□□ 0.24
TNFRSF1A-216ENST00000543995 PDCD2LQ9BRP1 358 aa16.55■□□□□ 0.24
TNFRSF1A-216ENST00000543995 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.55■□□□□ 0.24
TNFRSF1A-216ENST00000543995 NR3C2P08235 984 aa16.55■□□□□ 0.24
TNFRSF1A-216ENST00000543995 PDCP20941 246 aa16.55■□□□□ 0.24
TNFRSF1A-216ENST00000543995 CCND2P30279 289 aa16.55■□□□□ 0.24
TNFRSF1A-216ENST00000543995 GNL2Q13823 731 aaKnown RBP16.55■□□□□ 0.24
TNFRSF1A-216ENST00000543995 STXBP2Q15833 593 aa16.55■□□□□ 0.24
TNFRSF1A-216ENST00000543995 PRAMEF19Q5SWL8 479 aa16.55■□□□□ 0.24
TNFRSF1A-216ENST00000543995 DIS3L2Q8IYB7 885 aaKnown RBP16.55■□□□□ 0.24
TNFRSF1A-216ENST00000543995 OXER1Q8TDS5 423 aa16.55■□□□□ 0.24
TNFRSF1A-216ENST00000543995 ZHX1Q9UKY1 873 aaPredicted RBP16.55■□□□□ 0.24
TNFRSF1A-216ENST00000543995 LRRC37A2A6NM11 1700 aa16.54■□□□□ 0.24
TNFRSF1A-216ENST00000543995 FRMPD4Q14CM0 1322 aa16.54■□□□□ 0.24
TNFRSF1A-216ENST00000543995 RPTORQ8N122 1335 aa16.54■□□□□ 0.24
TNFRSF1A-216ENST00000543995 CCDC194A0A1B0GVG4 234 aa16.54■□□□□ 0.24
TNFRSF1A-216ENST00000543995 SNAI1O95863 264 aaPredicted RBP16.54■□□□□ 0.24
TNFRSF1A-216ENST00000543995 MYCP01106 439 aaPredicted RBP16.54■□□□□ 0.24
TNFRSF1A-216ENST00000543995 PRKAR2AP13861 404 aaKnown RBP16.54■□□□□ 0.24
TNFRSF1A-216ENST00000543995 EDNRBP24530 442 aa16.54■□□□□ 0.24
TNFRSF1A-216ENST00000543995 CACNB2Q08289 660 aaPredicted RBP16.54■□□□□ 0.24
TNFRSF1A-216ENST00000543995 COL13A1Q5TAT6 717 aaPredicted RBP16.54■□□□□ 0.24
TNFRSF1A-216ENST00000543995 IL31RAQ8NI17 732 aa16.54■□□□□ 0.24
TNFRSF1A-216ENST00000543995 MORC4Q8TE76 937 aa16.54■□□□□ 0.24
TNFRSF1A-216ENST00000543995 ABHD16BQ9H3Z7 469 aa16.54■□□□□ 0.24
TNFRSF1A-216ENST00000543995 MYH7BA7E2Y1 1941 aa16.54■□□□□ 0.24
TNFRSF1A-216ENST00000543995 BTBD18B2RXH4 712 aa16.53■□□□□ 0.24
TNFRSF1A-216ENST00000543995 M0R2N6 131 aa16.53■□□□□ 0.24
TNFRSF1A-216ENST00000543995 CNGA1P29973 690 aa16.53■□□□□ 0.24
TNFRSF1A-216ENST00000543995 NR5A1Q13285 461 aa16.53■□□□□ 0.24
TNFRSF1A-216ENST00000543995 PCNX4Q63HM2 1172 aa16.53■□□□□ 0.24
TNFRSF1A-216ENST00000543995 MCTP1Q6DN14 999 aa16.53■□□□□ 0.24
TNFRSF1A-216ENST00000543995 KRT25Q7Z3Z0 450 aa16.53■□□□□ 0.24
TNFRSF1A-216ENST00000543995 FBXO16Q8IX29 292 aaPredicted RBP16.53■□□□□ 0.24
TNFRSF1A-216ENST00000543995 ZFP91Q96JP5 570 aaPredicted RBP16.53■□□□□ 0.24
TNFRSF1A-216ENST00000543995 DAXXQ9UER7 740 aaPredicted RBP16.53■□□□□ 0.24
TNFRSF1A-216ENST00000543995 IGHA2P01877 340 aa16.52■□□□□ 0.24
TNFRSF1A-216ENST00000543995 CYBAP13498 195 aa16.52■□□□□ 0.24
TNFRSF1A-216ENST00000543995 SREBF1P36956 1147 aa16.52■□□□□ 0.24
TNFRSF1A-216ENST00000543995 ACVR2BQ13705 512 aa16.52■□□□□ 0.24
TNFRSF1A-216ENST00000543995 NONOQ15233 471 aaKnown RBP eCLIP16.52■□□□□ 0.24
TNFRSF1A-216ENST00000543995 PIK3AP1Q6ZUJ8 805 aa16.52■□□□□ 0.24
TNFRSF1A-216ENST00000543995 VSIG10LQ86VR7 867 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms