RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 SAMD3Q8N6K7 520 aa25.14■■□□□ 1.62
OTUB1-212ENST00000543988 MAP3K20Q9NYL2 800 aaKnown RBP25.14■■□□□ 1.62
OTUB1-212ENST00000543988 V9GY48 417 aaPredicted RBP25.14■■□□□ 1.62
OTUB1-212ENST00000543988 MYADML2A6NDP7 307 aa25.13■■□□□ 1.61
OTUB1-212ENST00000543988 B4DLN1 442 aa25.13■■□□□ 1.61
OTUB1-212ENST00000543988 SMPD1P17405 629 aa25.13■■□□□ 1.61
OTUB1-212ENST00000543988 MRPL12P52815 198 aaKnown RBP25.13■■□□□ 1.61
OTUB1-212ENST00000543988 IRX5P78411 483 aaPredicted RBP25.13■■□□□ 1.61
OTUB1-212ENST00000543988 ARHGEF16Q5VV41 709 aa25.13■■□□□ 1.61
OTUB1-212ENST00000543988 WWC2Q6AWC2 1192 aa25.13■■□□□ 1.61
OTUB1-212ENST00000543988 NOL8Q76FK4 1167 aaKnown RBP25.13■■□□□ 1.61
OTUB1-212ENST00000543988 RNF180Q86T96 592 aa25.13■■□□□ 1.61
OTUB1-212ENST00000543988 FCHSD1Q86WN1 690 aa25.13■■□□□ 1.61
OTUB1-212ENST00000543988 UPF3AQ9H1J1 476 aaKnown RBP25.13■■□□□ 1.61
OTUB1-212ENST00000543988 NCOA5Q9HCD5 579 aaKnown RBP25.13■■□□□ 1.61
OTUB1-212ENST00000543988 IL31RAQ8NI17 732 aa25.12■■□□□ 1.61
OTUB1-212ENST00000543988 IWS1Q96ST2 819 aa25.12■■□□□ 1.61
OTUB1-212ENST00000543988 GNEQ9Y223 722 aaKnown RBP25.12■■□□□ 1.61
OTUB1-212ENST00000543988 RBM47A0AV96 593 aaKnown RBP25.11■■□□□ 1.61
OTUB1-212ENST00000543988 CCT2P78371 535 aaKnown RBP25.11■■□□□ 1.61
OTUB1-212ENST00000543988 IQSEC1Q6DN90 963 aa25.11■■□□□ 1.61
OTUB1-212ENST00000543988 USP17L6PQ6QN14 398 aa25.11■■□□□ 1.61
OTUB1-212ENST00000543988 TLK2Q86UE8 772 aa25.11■■□□□ 1.61
OTUB1-212ENST00000543988 KLHDC9Q8NEP7 349 aa25.11■■□□□ 1.61
OTUB1-212ENST00000543988 DPF3Q92784 378 aa25.11■■□□□ 1.61
OTUB1-212ENST00000543988 PDCD2LQ9BRP1 358 aa25.11■■□□□ 1.61
OTUB1-212ENST00000543988 SENP6Q9GZR1 1112 aaPredicted RBP25.11■■□□□ 1.61
OTUB1-212ENST00000543988 NR3C2P08235 984 aa25.1■■□□□ 1.61
OTUB1-212ENST00000543988 C6orf222P0C671 652 aaPredicted RBP25.1■■□□□ 1.61
OTUB1-212ENST00000543988 GJA9P57773 515 aa25.1■■□□□ 1.61
OTUB1-212ENST00000543988 TYW1BQ6NUM6 668 aa25.1■■□□□ 1.61
OTUB1-212ENST00000543988 WDR11Q9BZH6 1224 aa25.1■■□□□ 1.61
OTUB1-212ENST00000543988 PHF24Q9UPV7 400 aa25.1■■□□□ 1.61
OTUB1-212ENST00000543988 PIK3CDO00329 1044 aa25.09■■□□□ 1.61
OTUB1-212ENST00000543988 MEIS2O14770 477 aa25.09■■□□□ 1.61
OTUB1-212ENST00000543988 CTAGE5O15320 804 aa25.09■■□□□ 1.61
OTUB1-212ENST00000543988 PPFIA3O75145 1194 aa25.09■■□□□ 1.61
OTUB1-212ENST00000543988 CST5P28325 142 aaPredicted RBP25.09■■□□□ 1.61
OTUB1-212ENST00000543988 STXBP2Q15833 593 aa25.09■■□□□ 1.61
OTUB1-212ENST00000543988 NTRK3Q16288 839 aa25.09■■□□□ 1.61
OTUB1-212ENST00000543988 LRRC26Q2I0M4 334 aa25.09■■□□□ 1.61
OTUB1-212ENST00000543988 DUSP28Q4G0W2 176 aa25.09■■□□□ 1.61
OTUB1-212ENST00000543988 SCFD2Q8WU76 684 aa25.09■■□□□ 1.61
OTUB1-212ENST00000543988 CUL5Q93034 780 aa25.09■■□□□ 1.61
OTUB1-212ENST00000543988 PHKBQ93100 1093 aa25.09■■□□□ 1.61
OTUB1-212ENST00000543988 FERMT2Q96AC1 680 aa25.09■■□□□ 1.61
OTUB1-212ENST00000543988 ZNF274Q96GC6 653 aaPredicted RBP25.09■■□□□ 1.61
OTUB1-212ENST00000543988 PSTPIP2Q9H939 334 aa25.09■■□□□ 1.61
OTUB1-212ENST00000543988 SPC25Q9HBM1 224 aa25.09■■□□□ 1.61
OTUB1-212ENST00000543988 GTF3C3Q9Y5Q9 886 aa25.09■■□□□ 1.61
OTUB1-212ENST00000543988 FRMPD4Q14CM0 1322 aa25.09■■□□□ 1.61
OTUB1-212ENST00000543988 STXBP3O00186 592 aa25.08■■□□□ 1.61
OTUB1-212ENST00000543988 ATN1P54259 1190 aaPredicted RBP25.08■■□□□ 1.61
OTUB1-212ENST00000543988 NAPAP54920 295 aa25.08■■□□□ 1.61
OTUB1-212ENST00000543988 PGM5Q15124 567 aa25.08■■□□□ 1.61
OTUB1-212ENST00000543988 CCSAPQ6IQ19 270 aaPredicted RBP25.08■■□□□ 1.61
OTUB1-212ENST00000543988 PPP1R18Q6NYC8 613 aa25.08■■□□□ 1.61
OTUB1-212ENST00000543988 SMARCC2Q8TAQ2 1214 aa25.08■■□□□ 1.61
OTUB1-212ENST00000543988 ALDH8A1Q9H2A2 487 aaPredicted RBP25.08■■□□□ 1.61
OTUB1-212ENST00000543988 hCG_1984214I3L0E3 225 aa25.07■■□□□ 1.6
OTUB1-212ENST00000543988 EVI5O60447 810 aa25.07■■□□□ 1.6
OTUB1-212ENST00000543988 ARIH2O95376 493 aa25.07■■□□□ 1.6
OTUB1-212ENST00000543988 MYCLP12524 364 aaPredicted RBP25.07■■□□□ 1.6
OTUB1-212ENST00000543988 AK2P54819 239 aa25.07■■□□□ 1.6
OTUB1-212ENST00000543988 NKX3-2P78367 333 aa25.07■■□□□ 1.6
OTUB1-212ENST00000543988 STK3Q13188 491 aa25.07■■□□□ 1.6
OTUB1-212ENST00000543988 UBE2SQ16763 222 aa25.07■■□□□ 1.6
OTUB1-212ENST00000543988 PFKFB3Q16875 520 aaPredicted RBP25.07■■□□□ 1.6
OTUB1-212ENST00000543988 SEPT14Q6ZU15 432 aa25.07■■□□□ 1.6
OTUB1-212ENST00000543988 ZNF713Q8N859 430 aaPredicted RBP25.07■■□□□ 1.6
OTUB1-212ENST00000543988 AP5M1Q9H0R1 490 aa25.07■■□□□ 1.6
OTUB1-212ENST00000543988 BARHL2Q9NY43 387 aa25.07■■□□□ 1.6
OTUB1-212ENST00000543988 TPCN1Q9ULQ1 816 aa25.07■■□□□ 1.6
OTUB1-212ENST00000543988 A0A1W2PQ45 241 aaPredicted RBP25.06■■□□□ 1.6
OTUB1-212ENST00000543988 A0A1W2PQY0 241 aa25.06■■□□□ 1.6
OTUB1-212ENST00000543988 DYNC1LI2O43237 492 aaPredicted RBP25.06■■□□□ 1.6
OTUB1-212ENST00000543988 PRPF3O43395 683 aaKnown RBP25.06■■□□□ 1.6
OTUB1-212ENST00000543988 EIF3JO75822 258 aaKnown RBP25.06■■□□□ 1.6
OTUB1-212ENST00000543988 SCG2P13521 617 aa25.06■■□□□ 1.6
OTUB1-212ENST00000543988 IFNAR1P17181 557 aa25.06■■□□□ 1.6
OTUB1-212ENST00000543988 ACLYP53396 1101 aa25.06■■□□□ 1.6
OTUB1-212ENST00000543988 BEX3Q00994 111 aa25.06■■□□□ 1.6
OTUB1-212ENST00000543988 KCNA10Q16322 511 aa25.06■■□□□ 1.6
OTUB1-212ENST00000543988 FSCN1Q16658 493 aaKnown RBP25.06■■□□□ 1.6
OTUB1-212ENST00000543988 PRPF38BQ5VTL8 546 aaKnown RBP25.06■■□□□ 1.6
OTUB1-212ENST00000543988 C7orf61Q8IZ16 206 aa25.06■■□□□ 1.6
OTUB1-212ENST00000543988 TSEN34Q9BSV6 310 aaKnown RBP25.06■■□□□ 1.6
OTUB1-212ENST00000543988 Q9Y3F1 56 aa25.06■■□□□ 1.6
OTUB1-212ENST00000543988 TXNP10599 105 aaKnown RBP25.05■■□□□ 1.6
OTUB1-212ENST00000543988 CCND2P30279 289 aa25.05■■□□□ 1.6
OTUB1-212ENST00000543988 TTLL4Q14679 1199 aa25.05■■□□□ 1.6
OTUB1-212ENST00000543988 PKN1Q16512 942 aa25.05■■□□□ 1.6
OTUB1-212ENST00000543988 GNASQ5JWF2 1037 aa25.05■■□□□ 1.6
OTUB1-212ENST00000543988 CCDC62Q6P9F0 684 aa25.05■■□□□ 1.6
OTUB1-212ENST00000543988 VSIG10LQ86VR7 867 aa25.05■■□□□ 1.6
OTUB1-212ENST00000543988 SLC26A6Q9BXS9 759 aa25.05■■□□□ 1.6
OTUB1-212ENST00000543988 RBM27Q9P2N5 1060 aaKnown RBP25.05■■□□□ 1.6
OTUB1-212ENST00000543988 CEP290O15078 2479 aa25.04■■□□□ 1.6
OTUB1-212ENST00000543988 MOXD2PA6NHM9 499 aa25.04■■□□□ 1.6
OTUB1-212ENST00000543988 H0YGN5 161 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms