RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.64■□□□□ 0.09
SP140-213ENST00000543928 DDX49Q9Y6V7 483 aaKnown RBP15.64■□□□□ 0.09
SP140-213ENST00000543928 HTTP42858 3142 aa15.64■□□□□ 0.09
SP140-213ENST00000543928 ASB14A6NK59 587 aa15.63■□□□□ 0.09
SP140-213ENST00000543928 IGHA2P01877 340 aa15.63■□□□□ 0.09
SP140-213ENST00000543928 INHAP05111 366 aa15.63■□□□□ 0.09
SP140-213ENST00000543928 ARHGEF16Q5VV41 709 aa15.63■□□□□ 0.09
SP140-213ENST00000543928 MAMDC4Q6UXC1 1216 aa15.63■□□□□ 0.09
SP140-213ENST00000543928 ARMCX2Q7L311 632 aa15.63■□□□□ 0.09
SP140-213ENST00000543928 TEX2Q8IWB9 1127 aa15.63■□□□□ 0.09
SP140-213ENST00000543928 FAM177A1Q8N128 213 aaPredicted RBP15.63■□□□□ 0.09
SP140-213ENST00000543928 MSL3Q8N5Y2 521 aaKnown RBP15.63■□□□□ 0.09
SP140-213ENST00000543928 FAM184AQ8NB25 1140 aa15.63■□□□□ 0.09
SP140-213ENST00000543928 NSUN6Q8TEA1 469 aaKnown RBP15.63■□□□□ 0.09
SP140-213ENST00000543928 PXMP2Q9NR77 195 aa15.63■□□□□ 0.09
SP140-213ENST00000543928 KCNJ14Q9UNX9 436 aa15.63■□□□□ 0.09
SP140-213ENST00000543928 SMC3Q9UQE7 1217 aa15.63■□□□□ 0.09
SP140-213ENST00000543928 SYNGAP1Q96PV0 1343 aa15.63■□□□□ 0.09
SP140-213ENST00000543928 MCM3APO60318 1980 aa15.62■□□□□ 0.09
SP140-213ENST00000543928 SPDYE3A6NKU9 549 aa15.62■□□□□ 0.09
SP140-213ENST00000543928 ADAMTS3O15072 1205 aa15.62■□□□□ 0.09
SP140-213ENST00000543928 EIF2AK2P19525 551 aaKnown RBP15.62■□□□□ 0.09
SP140-213ENST00000543928 REXO1Q8N1G1 1221 aaKnown RBP15.62■□□□□ 0.09
SP140-213ENST00000543928 BICD2Q8TD16 824 aa15.62■□□□□ 0.09
SP140-213ENST00000543928 MPHOSPH6Q99547 160 aaKnown RBP15.62■□□□□ 0.09
SP140-213ENST00000543928 PHF20Q9BVI0 1012 aa15.62■□□□□ 0.09
SP140-213ENST00000543928 TMEM260Q9NX78 707 aa15.62■□□□□ 0.09
SP140-213ENST00000543928 PCDHA4Q9UN74 947 aa15.62■□□□□ 0.09
SP140-213ENST00000543928 LOC102724159A0A0B4J2E5 919 aa15.61■□□□□ 0.09
SP140-213ENST00000543928 B4DLN1 442 aa15.61■□□□□ 0.09
SP140-213ENST00000543928 SNAI1O95863 264 aaPredicted RBP15.61■□□□□ 0.09
SP140-213ENST00000543928 PRKAR2AP13861 404 aaKnown RBP15.61■□□□□ 0.09
SP140-213ENST00000543928 GJB2P29033 226 aa15.61■□□□□ 0.09
SP140-213ENST00000543928 CLK2P49760 499 aaKnown RBP15.61■□□□□ 0.09
SP140-213ENST00000543928 UBXN2AP68543 259 aa15.61■□□□□ 0.09
SP140-213ENST00000543928 CACNB2Q08289 660 aaPredicted RBP15.61■□□□□ 0.09
SP140-213ENST00000543928 PDE4DQ08499 809 aa15.61■□□□□ 0.09
SP140-213ENST00000543928 TRIM29Q14134 588 aa15.61■□□□□ 0.09
SP140-213ENST00000543928 PWP2Q15269 919 aaKnown RBP15.61■□□□□ 0.09
SP140-213ENST00000543928 NPY5RQ15761 445 aa15.61■□□□□ 0.09
SP140-213ENST00000543928 PRAMEF19Q5SWL8 479 aa15.61■□□□□ 0.09
SP140-213ENST00000543928 JAKMIP3Q5VZ66 844 aa15.61■□□□□ 0.09
SP140-213ENST00000543928 GALNT17Q6IS24 598 aa15.61■□□□□ 0.09
SP140-213ENST00000543928 DAGLBQ8NCG7 672 aa15.61■□□□□ 0.09
SP140-213ENST00000543928 RASGRP4Q8TDF6 673 aa15.61■□□□□ 0.09
SP140-213ENST00000543928 MORC4Q8TE76 937 aa15.61■□□□□ 0.09
SP140-213ENST00000543928 ARMC5Q96C12 935 aa15.61■□□□□ 0.09
SP140-213ENST00000543928 C8orf76Q96K31 380 aa15.61■□□□□ 0.09
SP140-213ENST00000543928 IWS1Q96ST2 819 aa15.61■□□□□ 0.09
SP140-213ENST00000543928 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.61■□□□□ 0.09
SP140-213ENST00000543928 PCDHA6Q9UN73 950 aa15.61■□□□□ 0.09
SP140-213ENST00000543928 CNPY2Q9Y2B0 182 aa15.61■□□□□ 0.09
SP140-213ENST00000543928 KIF3AQ9Y496 699 aa15.61■□□□□ 0.09
SP140-213ENST00000543928 PCDHA8Q9Y5H6 950 aa15.61■□□□□ 0.09
SP140-213ENST00000543928 FOSP01100 380 aaPredicted RBP15.6■□□□□ 0.09
SP140-213ENST00000543928 MYCP01106 439 aaPredicted RBP15.6■□□□□ 0.09
SP140-213ENST00000543928 EDNRBP24530 442 aa15.6■□□□□ 0.09
SP140-213ENST00000543928 AP3B2Q13367 1082 aa15.6■□□□□ 0.09
SP140-213ENST00000543928 PGM5Q15124 567 aa15.6■□□□□ 0.09
SP140-213ENST00000543928 MAP3K21Q5TCX8 1036 aa15.6■□□□□ 0.09
SP140-213ENST00000543928 KRT40Q6A162 431 aa15.6■□□□□ 0.09
SP140-213ENST00000543928 BLIDQ8IZY5 108 aa15.6■□□□□ 0.09
SP140-213ENST00000543928 IL31RAQ8NI17 732 aa15.6■□□□□ 0.09
SP140-213ENST00000543928 INTS4Q96HW7 963 aaKnown RBP15.6■□□□□ 0.09
SP140-213ENST00000543928 ZNF333Q96JL9 665 aa15.6■□□□□ 0.09
SP140-213ENST00000543928 PGBD1Q96JS3 809 aa15.6■□□□□ 0.09
SP140-213ENST00000543928 PDCD2LQ9BRP1 358 aa15.6■□□□□ 0.09
SP140-213ENST00000543928 ANO3Q9BYT9 981 aa15.6■□□□□ 0.09
SP140-213ENST00000543928 FRMPD4Q14CM0 1322 aa15.6■□□□□ 0.09
SP140-213ENST00000543928 RPTORQ8N122 1335 aa15.6■□□□□ 0.09
SP140-213ENST00000543928 NR3C2P08235 984 aa15.59■□□□□ 0.09
SP140-213ENST00000543928 MYCLP12524 364 aaPredicted RBP15.59■□□□□ 0.09
SP140-213ENST00000543928 CYBAP13498 195 aa15.59■□□□□ 0.09
SP140-213ENST00000543928 GUCY1B3Q02153 619 aa15.59■□□□□ 0.09
SP140-213ENST00000543928 MCTP2Q6DN12 878 aa15.59■□□□□ 0.09
SP140-213ENST00000543928 EEPD1Q7L9B9 569 aa15.59■□□□□ 0.09
SP140-213ENST00000543928 TRPV1Q8NER1 839 aa15.59■□□□□ 0.09
SP140-213ENST00000543928 KATNBL1Q9H079 304 aa15.59■□□□□ 0.09
SP140-213ENST00000543928 ABHD16BQ9H3Z7 469 aa15.59■□□□□ 0.09
SP140-213ENST00000543928 EHMT1Q9H9B1 1298 aa15.59■□□□□ 0.09
SP140-213ENST00000543928 NRBP1Q9UHY1 535 aa15.59■□□□□ 0.09
SP140-213ENST00000543928 ZHX1Q9UKY1 873 aaPredicted RBP15.59■□□□□ 0.09
SP140-213ENST00000543928 M0R2N6 131 aa15.58■□□□□ 0.08
SP140-213ENST00000543928 MMP1P03956 469 aa15.58■□□□□ 0.08
SP140-213ENST00000543928 HSP90AA1P07900 732 aaKnown RBP15.58■□□□□ 0.08
SP140-213ENST00000543928 ZNF865P0CJ78 1059 aaPredicted RBP15.58■□□□□ 0.08
SP140-213ENST00000543928 CCND2P30279 289 aa15.58■□□□□ 0.08
SP140-213ENST00000543928 CCND3P30281 292 aaPredicted RBP15.58■□□□□ 0.08
SP140-213ENST00000543928 KRT2P35908 639 aa15.58■□□□□ 0.08
SP140-213ENST00000543928 ACVR2BQ13705 512 aa15.58■□□□□ 0.08
SP140-213ENST00000543928 MTFR1Q15390 333 aa15.58■□□□□ 0.08
SP140-213ENST00000543928 STXBP2Q15833 593 aa15.58■□□□□ 0.08
SP140-213ENST00000543928 FBXO16Q8IX29 292 aaPredicted RBP15.58■□□□□ 0.08
SP140-213ENST00000543928 FBXO18Q8NFZ0 1043 aa15.58■□□□□ 0.08
SP140-213ENST00000543928 OXER1Q8TDS5 423 aa15.58■□□□□ 0.08
SP140-213ENST00000543928 UNC93B1Q9H1C4 597 aa15.58■□□□□ 0.08
SP140-213ENST00000543928 BRMS1Q9HCU9 246 aa15.58■□□□□ 0.08
SP140-213ENST00000543928 VTA1Q9NP79 307 aa15.58■□□□□ 0.08
SP140-213ENST00000543928 LRRC37A2A6NM11 1700 aa15.57■□□□□ 0.08
SP140-213ENST00000543928 CCL5P13501 91 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms