RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 ITGB8P26012 769 aa8.31□□□□□ -1.08
NUP43-206ENST00000543637 KIF5BP33176 963 aa8.31□□□□□ -1.08
NUP43-206ENST00000543637 CHMP4BP1P59074 171 aa8.31□□□□□ -1.08
NUP43-206ENST00000543637 SEC23AQ15436 765 aa8.31□□□□□ -1.08
NUP43-206ENST00000543637 TMEM67Q5HYA8 995 aa8.31□□□□□ -1.08
NUP43-206ENST00000543637 C9orf50Q5SZB4 431 aa8.31□□□□□ -1.08
NUP43-206ENST00000543637 RNF20Q5VTR2 975 aa8.31□□□□□ -1.08
NUP43-206ENST00000543637 KCNV1Q6PIU1 500 aa8.31□□□□□ -1.08
NUP43-206ENST00000543637 SYNE3Q6ZMZ3 975 aa8.31□□□□□ -1.08
NUP43-206ENST00000543637 NFXL1Q6ZNB6 911 aa8.31□□□□□ -1.08
NUP43-206ENST00000543637 HOMER1Q86YM7 354 aa8.31□□□□□ -1.08
NUP43-206ENST00000543637 FAM126BQ8IXS8 530 aa8.31□□□□□ -1.08
NUP43-206ENST00000543637 STAG2Q8N3U4 1231 aa8.31□□□□□ -1.08
NUP43-206ENST00000543637 RETREG2Q8NC44 543 aa8.31□□□□□ -1.08
NUP43-206ENST00000543637 CTCFLQ8NI51 663 aaPredicted RBP8.31□□□□□ -1.08
NUP43-206ENST00000543637 TBC1D5Q92609 795 aa8.31□□□□□ -1.08
NUP43-206ENST00000543637 FAM161BQ96MY7 647 aa8.31□□□□□ -1.08
NUP43-206ENST00000543637 MTG1Q9BT17 334 aaPredicted RBP8.31□□□□□ -1.08
NUP43-206ENST00000543637 HIPK3Q9H422 1215 aa8.31□□□□□ -1.08
NUP43-206ENST00000543637 MAD2L2Q9UI95 211 aa8.31□□□□□ -1.08
NUP43-206ENST00000543637 NOD1Q9Y239 953 aa8.31□□□□□ -1.08
NUP43-206ENST00000543637 STXBP5LQ9Y2K9 1186 aa8.31□□□□□ -1.08
NUP43-206ENST00000543637 PCDHA1Q9Y5I3 950 aa8.31□□□□□ -1.08
NUP43-206ENST00000543637 DDX49Q9Y6V7 483 aaKnown RBP8.31□□□□□ -1.08
NUP43-206ENST00000543637 ASTN1O14525 1302 aa8.3□□□□□ -1.08
NUP43-206ENST00000543637 PNMA6FA0A0J9YX94 578 aa8.3□□□□□ -1.08
NUP43-206ENST00000543637 PALM3A6NDB9 673 aaPredicted RBP8.3□□□□□ -1.08
NUP43-206ENST00000543637 GCOM1H8Y6P7 765 aaPredicted RBP8.3□□□□□ -1.08
NUP43-206ENST00000543637 CTAGE5O15320 804 aa8.3□□□□□ -1.08
NUP43-206ENST00000543637 EIF3JO75822 258 aaKnown RBP8.3□□□□□ -1.08
NUP43-206ENST00000543637 CD4P01730 458 aa8.3□□□□□ -1.08
NUP43-206ENST00000543637 NR3C2P08235 984 aa8.3□□□□□ -1.08
NUP43-206ENST00000543637 POLR2MP0CAP2 368 aa8.3□□□□□ -1.08
NUP43-206ENST00000543637 CALM1P0DP23 149 aa8.3□□□□□ -1.08
NUP43-206ENST00000543637 CALM2P0DP24 149 aa8.3□□□□□ -1.08
NUP43-206ENST00000543637 CALM3P0DP25 149 aa8.3□□□□□ -1.08
NUP43-206ENST00000543637 MYCLP12524 364 aaPredicted RBP8.3□□□□□ -1.08
NUP43-206ENST00000543637 CSF2RAP15509 400 aa8.3□□□□□ -1.08
NUP43-206ENST00000543637 MCM5P33992 734 aa8.3□□□□□ -1.08
NUP43-206ENST00000543637 GNAQP50148 359 aa8.3□□□□□ -1.08
NUP43-206ENST00000543637 PSMC6P62333 389 aa8.3□□□□□ -1.08
NUP43-206ENST00000543637 PURAQ00577 322 aaKnown RBP8.3□□□□□ -1.08
NUP43-206ENST00000543637 PTPN11Q06124 597 aaPredicted RBP8.3□□□□□ -1.08
NUP43-206ENST00000543637 GRM4Q14833 912 aa8.3□□□□□ -1.08
NUP43-206ENST00000543637 PSRC1Q6PGN9 363 aaPredicted RBP8.3□□□□□ -1.08
NUP43-206ENST00000543637 CENPQQ7L2Z9 268 aaPredicted RBP8.3□□□□□ -1.08
NUP43-206ENST00000543637 CHST3Q7LGC8 479 aa8.3□□□□□ -1.08
NUP43-206ENST00000543637 DHX37Q8IY37 1157 aaKnown RBP8.3□□□□□ -1.08
NUP43-206ENST00000543637 SLC43A3Q8NBI5 491 aa8.3□□□□□ -1.08
NUP43-206ENST00000543637 SYTL5Q8TDW5 730 aaPredicted RBP8.3□□□□□ -1.08
NUP43-206ENST00000543637 CUL5Q93034 780 aa8.3□□□□□ -1.08
NUP43-206ENST00000543637 RRP36Q96EU6 259 aaKnown RBP8.3□□□□□ -1.08
NUP43-206ENST00000543637 PIGSQ96S52 555 aa8.3□□□□□ -1.08
NUP43-206ENST00000543637 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.3□□□□□ -1.08
NUP43-206ENST00000543637 LZTS2Q9BRK4 669 aa8.3□□□□□ -1.08
NUP43-206ENST00000543637 MTA3Q9BTC8 594 aa8.3□□□□□ -1.08
NUP43-206ENST00000543637 IL23AQ9NPF7 189 aa8.3□□□□□ -1.08
NUP43-206ENST00000543637 TBX21Q9UL17 535 aa8.3□□□□□ -1.08
NUP43-206ENST00000543637 RBM8AQ9Y5S9 174 aaKnown RBP8.3□□□□□ -1.08
NUP43-206ENST00000543637 MRVI1Q9Y6F6 885 aa8.3□□□□□ -1.08
NUP43-206ENST00000543637 A6NJR5 290 aa8.29□□□□□ -1.08
NUP43-206ENST00000543637 B4GALT4O60513 344 aa8.29□□□□□ -1.08
NUP43-206ENST00000543637 ACRP10323 421 aa8.29□□□□□ -1.08
NUP43-206ENST00000543637 ACTN1P12814 892 aa8.29□□□□□ -1.08
NUP43-206ENST00000543637 EIF2AK2P19525 551 aaKnown RBP8.29□□□□□ -1.08
NUP43-206ENST00000543637 EDNRBP24530 442 aa8.29□□□□□ -1.08
NUP43-206ENST00000543637 CCND2P30279 289 aa8.29□□□□□ -1.08
NUP43-206ENST00000543637 CYP2C18P33260 490 aa8.29□□□□□ -1.08
NUP43-206ENST00000543637 BFSP2Q13515 415 aa8.29□□□□□ -1.08
NUP43-206ENST00000543637 LAMC2Q13753 1193 aa8.29□□□□□ -1.08
NUP43-206ENST00000543637 DGKDQ16760 1214 aa8.29□□□□□ -1.08
NUP43-206ENST00000543637 LY6KQ17RY6 165 aa8.29□□□□□ -1.08
NUP43-206ENST00000543637 NBPF20Q3BBV1 942 aa8.29□□□□□ -1.08
NUP43-206ENST00000543637 TMEM63BQ5T3F8 832 aa8.29□□□□□ -1.08
NUP43-206ENST00000543637 NFRKBQ6P4R8 1299 aa8.29□□□□□ -1.08
NUP43-206ENST00000543637 ZNF365Q70YC5 407 aa8.29□□□□□ -1.08
NUP43-206ENST00000543637 CCDC155Q8N6L0 562 aa8.29□□□□□ -1.08
NUP43-206ENST00000543637 SMARCC2Q8TAQ2 1214 aa8.29□□□□□ -1.08
NUP43-206ENST00000543637 IGDCC4Q8TDY8 1250 aa8.29□□□□□ -1.08
NUP43-206ENST00000543637 TMEM87BQ96K49 555 aa8.29□□□□□ -1.08
NUP43-206ENST00000543637 MAP3K14Q99558 947 aa8.29□□□□□ -1.08
NUP43-206ENST00000543637 TRPV6Q9H1D0 765 aa8.29□□□□□ -1.08
NUP43-206ENST00000543637 IL25Q9H293 177 aa8.29□□□□□ -1.08
NUP43-206ENST00000543637 ALDH8A1Q9H2A2 487 aaPredicted RBP8.29□□□□□ -1.08
NUP43-206ENST00000543637 SEMA6BQ9H3T3 888 aa8.29□□□□□ -1.08
NUP43-206ENST00000543637 RIOX1Q9H6W3 641 aa8.29□□□□□ -1.08
NUP43-206ENST00000543637 ANO2Q9NQ90 1003 aa8.29□□□□□ -1.08
NUP43-206ENST00000543637 PXMP2Q9NR77 195 aa8.29□□□□□ -1.08
NUP43-206ENST00000543637 SEC63Q9UGP8 760 aaKnown RBP8.29□□□□□ -1.08
NUP43-206ENST00000543637 MSRAQ9UJ68 235 aa8.29□□□□□ -1.08
NUP43-206ENST00000543637 TRIP12Q14669 1992 aaPredicted RBP8.29□□□□□ -1.08
NUP43-206ENST00000543637 MKI67P46013 3256 aaKnown RBP8.28□□□□□ -1.08
NUP43-206ENST00000543637 BRCA2P51587 3418 aa8.28□□□□□ -1.08
NUP43-206ENST00000543637 TMEM265A0A087WTH1 108 aa8.28□□□□□ -1.08
NUP43-206ENST00000543637 PRC1O43663 620 aa8.28□□□□□ -1.08
NUP43-206ENST00000543637 DDAH1O94760 285 aa8.28□□□□□ -1.08
NUP43-206ENST00000543637 TGFB3P10600 412 aa8.28□□□□□ -1.08
NUP43-206ENST00000543637 SMARCA1P28370 1054 aa8.28□□□□□ -1.08
NUP43-206ENST00000543637 HSD17B4P51659 736 aa8.28□□□□□ -1.08
NUP43-206ENST00000543637 EPHB4P54760 987 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms