RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 CNGA1P29973 690 aa13.15□□□□□ -0.3
COPS7A-217ENST00000543537 SNX17Q15036 470 aa13.15□□□□□ -0.3
COPS7A-217ENST00000543537 LRRC26Q2I0M4 334 aa13.15□□□□□ -0.3
COPS7A-217ENST00000543537 C1orf53Q5VUE5 145 aa13.15□□□□□ -0.3
COPS7A-217ENST00000543537 RAVER2Q9HCJ3 691 aaKnown RBP13.15□□□□□ -0.3
COPS7A-217ENST00000543537 POLR3EQ9NVU0 708 aa13.15□□□□□ -0.3
COPS7A-217ENST00000543537 PLXNA1Q9UIW2 1896 aa13.14□□□□□ -0.31
COPS7A-217ENST00000543537 SMCHD1A6NHR9 2005 aa13.14□□□□□ -0.31
COPS7A-217ENST00000543537 GOLGA6L3A6NEY3 463 aa13.14□□□□□ -0.31
COPS7A-217ENST00000543537 SNHG28P0DPA3 235 aa13.14□□□□□ -0.31
COPS7A-217ENST00000543537 ZNF445P59923 1031 aa13.14□□□□□ -0.31
COPS7A-217ENST00000543537 DNM1Q05193 864 aaKnown RBP13.14□□□□□ -0.31
COPS7A-217ENST00000543537 RILPL1Q5EBL4 403 aa13.14□□□□□ -0.31
COPS7A-217ENST00000543537 TMTC3Q6ZXV5 915 aa13.14□□□□□ -0.31
COPS7A-217ENST00000543537 C7orf61Q8IZ16 206 aa13.14□□□□□ -0.31
COPS7A-217ENST00000543537 CPXCR1Q8N123 301 aa13.14□□□□□ -0.31
COPS7A-217ENST00000543537 PNMA1Q8ND90 353 aa13.14□□□□□ -0.31
COPS7A-217ENST00000543537 CCDC148Q8NFR7 591 aa13.14□□□□□ -0.31
COPS7A-217ENST00000543537 FGD4Q96M96 766 aa13.14□□□□□ -0.31
COPS7A-217ENST00000543537 TMEM47Q9BQJ4 181 aa13.14□□□□□ -0.31
COPS7A-217ENST00000543537 SLC26A6Q9BXS9 759 aa13.14□□□□□ -0.31
COPS7A-217ENST00000543537 GLT8D2Q9H1C3 349 aa13.14□□□□□ -0.31
COPS7A-217ENST00000543537 GPHNQ9NQX3 736 aaPredicted RBP13.14□□□□□ -0.31
COPS7A-217ENST00000543537 FAM217BQ9NTX9 383 aaPredicted RBP13.14□□□□□ -0.31
COPS7A-217ENST00000543537 RTEL1Q9NZ71 1219 aa13.14□□□□□ -0.31
COPS7A-217ENST00000543537 CTAGE5O15320 804 aa13.13□□□□□ -0.31
COPS7A-217ENST00000543537 CAVIN2O95810 425 aa13.13□□□□□ -0.31
COPS7A-217ENST00000543537 SNAI1O95863 264 aaPredicted RBP13.13□□□□□ -0.31
COPS7A-217ENST00000543537 AKR1A1P14550 325 aa13.13□□□□□ -0.31
COPS7A-217ENST00000543537 CDC27P30260 824 aa13.13□□□□□ -0.31
COPS7A-217ENST00000543537 MRE11P49959 708 aa13.13□□□□□ -0.31
COPS7A-217ENST00000543537 COL9A3Q14050 684 aaPredicted RBP13.13□□□□□ -0.31
COPS7A-217ENST00000543537 GRM4Q14833 912 aa13.13□□□□□ -0.31
COPS7A-217ENST00000543537 LRRC41Q15345 812 aa13.13□□□□□ -0.31
COPS7A-217ENST00000543537 ASPRV1Q53RT3 343 aa13.13□□□□□ -0.31
COPS7A-217ENST00000543537 PRAMEF19Q5SWL8 479 aa13.13□□□□□ -0.31
COPS7A-217ENST00000543537 GPATCH4Q5T3I0 446 aaKnown RBP13.13□□□□□ -0.31
COPS7A-217ENST00000543537 FOXD4L5Q5VV16 416 aaPredicted RBP13.13□□□□□ -0.31
COPS7A-217ENST00000543537 FAM133AQ8N9E0 248 aa13.13□□□□□ -0.31
COPS7A-217ENST00000543537 FOXD4L4Q8WXT5 416 aaPredicted RBP13.13□□□□□ -0.31
COPS7A-217ENST00000543537 ANP32BQ92688 251 aaKnown RBP13.13□□□□□ -0.31
COPS7A-217ENST00000543537 CCDC34Q96HJ3 373 aa13.13□□□□□ -0.31
COPS7A-217ENST00000543537 SENP6Q9GZR1 1112 aaPredicted RBP13.13□□□□□ -0.31
COPS7A-217ENST00000543537 RANBP17Q9H2T7 1088 aaKnown RBP13.13□□□□□ -0.31
COPS7A-217ENST00000543537 ACAD9Q9H845 621 aa13.13□□□□□ -0.31
COPS7A-217ENST00000543537 DDX19AQ9NUU7 478 aaKnown RBP13.13□□□□□ -0.31
COPS7A-217ENST00000543537 PRR12Q9ULL5 1215 aa13.13□□□□□ -0.31
COPS7A-217ENST00000543537 CNPY2Q9Y2B0 182 aa13.13□□□□□ -0.31
COPS7A-217ENST00000543537 CTDP1Q9Y5B0 961 aaPredicted RBP13.13□□□□□ -0.31
COPS7A-217ENST00000543537 A0A1W2PQ27 194 aa13.12□□□□□ -0.31
COPS7A-217ENST00000543537 A0A1W2PQ64 194 aa13.12□□□□□ -0.31
COPS7A-217ENST00000543537 A0A1W2PQD8 194 aa13.12□□□□□ -0.31
COPS7A-217ENST00000543537 KBTBD13C9JR72 458 aa13.12□□□□□ -0.31
COPS7A-217ENST00000543537 MMP1P03956 469 aa13.12□□□□□ -0.31
COPS7A-217ENST00000543537 RARBP10826 455 aa13.12□□□□□ -0.31
COPS7A-217ENST00000543537 PDHBP11177 359 aa13.12□□□□□ -0.31
COPS7A-217ENST00000543537 TAL1P17542 331 aaPredicted RBP13.12□□□□□ -0.31
COPS7A-217ENST00000543537 TRAPPC10P48553 1259 aa13.12□□□□□ -0.31
COPS7A-217ENST00000543537 NKX3-2P78367 333 aa13.12□□□□□ -0.31
COPS7A-217ENST00000543537 SF3A1Q15459 793 aaKnown RBP13.12□□□□□ -0.31
COPS7A-217ENST00000543537 CCDC183Q5T5S1 534 aa13.12□□□□□ -0.31
COPS7A-217ENST00000543537 KRT40Q6A162 431 aa13.12□□□□□ -0.31
COPS7A-217ENST00000543537 MCTP2Q6DN12 878 aa13.12□□□□□ -0.31
COPS7A-217ENST00000543537 KCTD1Q719H9 257 aa13.12□□□□□ -0.31
COPS7A-217ENST00000543537 ANKRD35Q8N283 1001 aa13.12□□□□□ -0.31
COPS7A-217ENST00000543537 LEO1Q8WVC0 666 aaPredicted RBP13.12□□□□□ -0.31
COPS7A-217ENST00000543537 ZKSCAN3Q9BRR0 538 aa13.12□□□□□ -0.31
COPS7A-217ENST00000543537 SPZ1Q9BXG8 430 aa13.12□□□□□ -0.31
COPS7A-217ENST00000543537 ABHD16BQ9H3Z7 469 aa13.12□□□□□ -0.31
COPS7A-217ENST00000543537 PNMA2Q9UL42 364 aa13.12□□□□□ -0.31
COPS7A-217ENST00000543537 NOL7Q9UMY1 257 aaKnown RBP13.12□□□□□ -0.31
COPS7A-217ENST00000543537 PHF24Q9UPV7 400 aa13.12□□□□□ -0.31
COPS7A-217ENST00000543537 DNAH12Q6ZR08 3092 aa13.11□□□□□ -0.31
COPS7A-217ENST00000543537 LOC102724159A0A0B4J2E5 919 aa13.11□□□□□ -0.31
COPS7A-217ENST00000543537 FIBPO43427 364 aa13.11□□□□□ -0.31
COPS7A-217ENST00000543537 PPP6R2O75170 966 aa13.11□□□□□ -0.31
COPS7A-217ENST00000543537 ADAMTS4O75173 837 aa13.11□□□□□ -0.31
COPS7A-217ENST00000543537 ICAM1P05362 532 aa13.11□□□□□ -0.31
COPS7A-217ENST00000543537 PARP1P09874 1014 aaKnown RBP13.11□□□□□ -0.31
COPS7A-217ENST00000543537 CST5P28325 142 aaPredicted RBP13.11□□□□□ -0.31
COPS7A-217ENST00000543537 NASPP49321 788 aaPredicted RBP13.11□□□□□ -0.31
COPS7A-217ENST00000543537 PWP2Q15269 919 aaKnown RBP13.11□□□□□ -0.31
COPS7A-217ENST00000543537 GJC2Q5T442 439 aaPredicted RBP13.11□□□□□ -0.31
COPS7A-217ENST00000543537 MYSM1Q5VVJ2 828 aa13.11□□□□□ -0.31
COPS7A-217ENST00000543537 SLC39A5Q6ZMH5 540 aa13.11□□□□□ -0.31
COPS7A-217ENST00000543537 KLHDC9Q8NEP7 349 aa13.11□□□□□ -0.31
COPS7A-217ENST00000543537 BICD2Q8TD16 824 aa13.11□□□□□ -0.31
COPS7A-217ENST00000543537 AGBL1Q96MI9 1066 aa13.11□□□□□ -0.31
COPS7A-217ENST00000543537 TSEN34Q9BSV6 310 aaKnown RBP13.11□□□□□ -0.31
COPS7A-217ENST00000543537 KATNBL1Q9H079 304 aa13.11□□□□□ -0.31
COPS7A-217ENST00000543537 A1CFQ9NQ94 594 aaKnown RBP13.11□□□□□ -0.31
COPS7A-217ENST00000543537 XPNPEP3Q9NQH7 507 aa13.11□□□□□ -0.31
COPS7A-217ENST00000543537 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.11□□□□□ -0.31
COPS7A-217ENST00000543537 RNF146Q9NTX7 359 aa13.11□□□□□ -0.31
COPS7A-217ENST00000543537 FAM184BQ9ULE4 1060 aa13.11□□□□□ -0.31
COPS7A-217ENST00000543537 PALM3A6NDB9 673 aaPredicted RBP13.1□□□□□ -0.31
COPS7A-217ENST00000543537 DUSP11O75319 330 aaKnown RBP13.1□□□□□ -0.31
COPS7A-217ENST00000543537 GNA11P29992 359 aa13.1□□□□□ -0.31
COPS7A-217ENST00000543537 MAGEA10P43363 369 aaPredicted RBP13.1□□□□□ -0.31
COPS7A-217ENST00000543537 ZNF543Q08ER8 600 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms