RNA–Protein interactions for RNA: ENST00000543239.1

CIT-212, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-212ENST00000543239 ARHGEF16Q5VV41 709 aa18.78■□□□□ 0.6
CIT-212ENST00000543239 NOL8Q76FK4 1167 aaKnown RBP18.78■□□□□ 0.6
CIT-212ENST00000543239 TLK2Q86UE8 772 aa18.78■□□□□ 0.6
CIT-212ENST00000543239 C7orf61Q8IZ16 206 aa18.78■□□□□ 0.6
CIT-212ENST00000543239 CMTR1Q8N1G2 835 aaKnown RBP18.78■□□□□ 0.6
CIT-212ENST00000543239 PCSK9Q8NBP7 692 aaKnown RBP18.78■□□□□ 0.6
CIT-212ENST00000543239 SCFD2Q8WU76 684 aa18.78■□□□□ 0.6
CIT-212ENST00000543239 PXMP2Q9NR77 195 aa18.78■□□□□ 0.6
CIT-212ENST00000543239 NID2Q14112 1375 aa18.78■□□□□ 0.6
CIT-212ENST00000543239 CNTNAP5Q8WYK1 1306 aa18.77■□□□□ 0.6
CIT-212ENST00000543239 CCDC196A0A1B0GTZ2 297 aa18.77■□□□□ 0.6
CIT-212ENST00000543239 ACLYP53396 1101 aa18.77■□□□□ 0.6
CIT-212ENST00000543239 APOBRQ0VD83 1088 aa18.77■□□□□ 0.6
CIT-212ENST00000543239 SNX17Q15036 470 aa18.77■□□□□ 0.6
CIT-212ENST00000543239 STXBP2Q15833 593 aa18.77■□□□□ 0.6
CIT-212ENST00000543239 C1orf53Q5VUE5 145 aa18.77■□□□□ 0.6
CIT-212ENST00000543239 SLC39A5Q6ZMH5 540 aa18.77■□□□□ 0.6
CIT-212ENST00000543239 CCDC82Q8N4S0 544 aa18.77■□□□□ 0.6
CIT-212ENST00000543239 WDR11Q9BZH6 1224 aa18.77■□□□□ 0.6
CIT-212ENST00000543239 CYP46A1Q9Y6A2 500 aa18.77■□□□□ 0.6
CIT-212ENST00000543239 A0A1W2PQ45 241 aaPredicted RBP18.76■□□□□ 0.59
CIT-212ENST00000543239 A0A1W2PQY0 241 aa18.76■□□□□ 0.59
CIT-212ENST00000543239 MYADML2A6NDP7 307 aa18.76■□□□□ 0.59
CIT-212ENST00000543239 NKRFO15226 690 aaKnown RBP eCLIP18.76■□□□□ 0.59
CIT-212ENST00000543239 CTAGE5O15320 804 aa18.76■□□□□ 0.59
CIT-212ENST00000543239 NR3C2P08235 984 aa18.76■□□□□ 0.59
CIT-212ENST00000543239 EIF2AK2P19525 551 aaKnown RBP18.76■□□□□ 0.59
CIT-212ENST00000543239 HOXA13P31271 388 aaPredicted RBP18.76■□□□□ 0.59
CIT-212ENST00000543239 METAP2P50579 478 aaKnown RBP eCLIP18.76■□□□□ 0.59
CIT-212ENST00000543239 ATN1P54259 1190 aaPredicted RBP18.76■□□□□ 0.59
CIT-212ENST00000543239 EVCP57679 992 aa18.76■□□□□ 0.59
CIT-212ENST00000543239 FUT2Q10981 343 aa18.76■□□□□ 0.59
CIT-212ENST00000543239 KCNA10Q16322 511 aa18.76■□□□□ 0.59
CIT-212ENST00000543239 GNASQ5JWF2 1037 aa18.76■□□□□ 0.59
CIT-212ENST00000543239 FERMT2Q96AC1 680 aa18.76■□□□□ 0.59
CIT-212ENST00000543239 PDCD2LQ9BRP1 358 aa18.76■□□□□ 0.59
CIT-212ENST00000543239 AP5M1Q9H0R1 490 aa18.76■□□□□ 0.59
CIT-212ENST00000543239 PIK3CDO00329 1044 aa18.75■□□□□ 0.59
CIT-212ENST00000543239 CDC27P30260 824 aa18.75■□□□□ 0.59
CIT-212ENST00000543239 RTP1P59025 263 aa18.75■□□□□ 0.59
CIT-212ENST00000543239 ANAPC15P60006 121 aa18.75■□□□□ 0.59
CIT-212ENST00000543239 CUL5Q93034 780 aa18.75■□□□□ 0.59
CIT-212ENST00000543239 FAM217BQ9NTX9 383 aaPredicted RBP18.75■□□□□ 0.59
CIT-212ENST00000543239 NAP1L2Q9ULW6 460 aaPredicted RBP18.75■□□□□ 0.59
CIT-212ENST00000543239 hCG_1984214I3L0E3 225 aa18.74■□□□□ 0.59
CIT-212ENST00000543239 DYNC1LI2O43237 492 aaPredicted RBP18.74■□□□□ 0.59
CIT-212ENST00000543239 EIF3JO75822 258 aaKnown RBP18.74■□□□□ 0.59
CIT-212ENST00000543239 ASGR1P07306 291 aa18.74■□□□□ 0.59
CIT-212ENST00000543239 TTLL4Q14679 1199 aa18.74■□□□□ 0.59
CIT-212ENST00000543239 PGM5Q15124 567 aa18.74■□□□□ 0.59
CIT-212ENST00000543239 FSCN1Q16658 493 aaKnown RBP18.74■□□□□ 0.59
CIT-212ENST00000543239 ZNF713Q8N859 430 aaPredicted RBP18.74■□□□□ 0.59
CIT-212ENST00000543239 GLT1D1Q96MS3 346 aa18.74■□□□□ 0.59
CIT-212ENST00000543239 STARD7Q9NQZ5 370 aa18.74■□□□□ 0.59
CIT-212ENST00000543239 ELP1O95163 1332 aa18.74■□□□□ 0.59
CIT-212ENST00000543239 FRMPD4Q14CM0 1322 aa18.74■□□□□ 0.59
CIT-212ENST00000543239 hCG_1642624A0A1W2PR95 340 aa18.73■□□□□ 0.59
CIT-212ENST00000543239 ZEB2O60315 1214 aa18.73■□□□□ 0.59
CIT-212ENST00000543239 TXNP10599 105 aaKnown RBP18.73■□□□□ 0.59
CIT-212ENST00000543239 IRX5P78411 483 aaPredicted RBP18.73■□□□□ 0.59
CIT-212ENST00000543239 TOB2Q14106 344 aaPredicted RBP18.73■□□□□ 0.59
CIT-212ENST00000543239 TMEM63BQ5T3F8 832 aa18.73■□□□□ 0.59
CIT-212ENST00000543239 PPP1R18Q6NYC8 613 aa18.73■□□□□ 0.59
CIT-212ENST00000543239 FCHSD1Q86WN1 690 aa18.73■□□□□ 0.59
CIT-212ENST00000543239 TEX2Q8IWB9 1127 aa18.73■□□□□ 0.59
CIT-212ENST00000543239 SMARCC2Q8TAQ2 1214 aa18.73■□□□□ 0.59
CIT-212ENST00000543239 UPF3BQ9BZI7 483 aaKnown RBP18.73■□□□□ 0.59
CIT-212ENST00000543239 DNAH12Q6ZR08 3092 aa18.73■□□□□ 0.59
CIT-212ENST00000543239 MEIS2O14770 477 aa18.72■□□□□ 0.59
CIT-212ENST00000543239 CABYRO75952 493 aa18.72■□□□□ 0.59
CIT-212ENST00000543239 ADD1P35611 737 aaKnown RBP18.72■□□□□ 0.59
CIT-212ENST00000543239 CPT1AP50416 773 aa18.72■□□□□ 0.59
CIT-212ENST00000543239 BEX3Q00994 111 aa18.72■□□□□ 0.59
CIT-212ENST00000543239 CCDC62Q6P9F0 684 aa18.72■□□□□ 0.59
CIT-212ENST00000543239 HEATR3Q7Z4Q2 680 aa18.72■□□□□ 0.59
CIT-212ENST00000543239 VSIG10LQ86VR7 867 aa18.72■□□□□ 0.59
CIT-212ENST00000543239 IL17RAQ96F46 866 aa18.72■□□□□ 0.59
CIT-212ENST00000543239 PSTPIP2Q9H939 334 aa18.72■□□□□ 0.59
CIT-212ENST00000543239 RBM27Q9P2N5 1060 aaKnown RBP18.72■□□□□ 0.59
CIT-212ENST00000543239 ATP11BQ9Y2G3 1177 aa18.72■□□□□ 0.59
CIT-212ENST00000543239 V9GY48 417 aaPredicted RBP18.72■□□□□ 0.59
CIT-212ENST00000543239 CEP290O15078 2479 aa18.72■□□□□ 0.59
CIT-212ENST00000543239 PDIA3P30101 505 aaKnown RBP18.71■□□□□ 0.59
CIT-212ENST00000543239 CCND2P30279 289 aa18.71■□□□□ 0.59
CIT-212ENST00000543239 TRIM60Q495X7 471 aa18.71■□□□□ 0.59
CIT-212ENST00000543239 BRDTQ58F21 947 aaPredicted RBP18.71■□□□□ 0.59
CIT-212ENST00000543239 WWC2Q6AWC2 1192 aa18.71■□□□□ 0.59
CIT-212ENST00000543239 USP17L6PQ6QN14 398 aa18.71■□□□□ 0.59
CIT-212ENST00000543239 SEPT14Q6ZU15 432 aa18.71■□□□□ 0.59
CIT-212ENST00000543239 OR6J1Q8NGC5 347 aa18.71■□□□□ 0.59
CIT-212ENST00000543239 GPKOWQ92917 476 aaPredicted RBP eCLIP18.71■□□□□ 0.59
CIT-212ENST00000543239 ZMYND8Q9ULU4 1186 aaPredicted RBP18.71■□□□□ 0.59
CIT-212ENST00000543239 KIAA1217Q5T5P2 1943 aa18.7■□□□□ 0.58
CIT-212ENST00000543239 STAM2O75886 525 aa18.7■□□□□ 0.58
CIT-212ENST00000543239 ARIH2O95376 493 aa18.7■□□□□ 0.58
CIT-212ENST00000543239 MYCLP12524 364 aaPredicted RBP18.7■□□□□ 0.58
CIT-212ENST00000543239 PTGS1P23219 599 aa18.7■□□□□ 0.58
CIT-212ENST00000543239 KCNV1Q6PIU1 500 aa18.7■□□□□ 0.58
CIT-212ENST00000543239 IL31RAQ8NI17 732 aa18.7■□□□□ 0.58
CIT-212ENST00000543239 ZNF274Q96GC6 653 aaPredicted RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms