RNA–Protein interactions for RNA: ENST00000541922.1

C2CD3-216, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 5

Gene C2CD3, Length 767 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-216ENST00000541922 BADQ92934 168 aa25.61■■□□□ 1.69
C2CD3-216ENST00000541922 IWS1Q96ST2 819 aa25.61■■□□□ 1.69
C2CD3-216ENST00000541922 PNMA6FA0A0J9YX94 578 aa25.6■■□□□ 1.69
C2CD3-216ENST00000541922 SOX1O00570 391 aaPredicted RBP25.6■■□□□ 1.69
C2CD3-216ENST00000541922 OPLAHO14841 1288 aa25.6■■□□□ 1.69
C2CD3-216ENST00000541922 KIAA0355O15063 1070 aa25.6■■□□□ 1.69
C2CD3-216ENST00000541922 NKRFO15226 690 aaKnown RBP eCLIP25.6■■□□□ 1.69
C2CD3-216ENST00000541922 LIFRP42702 1097 aa25.6■■□□□ 1.69
C2CD3-216ENST00000541922 CDK7P50613 346 aa25.6■■□□□ 1.69
C2CD3-216ENST00000541922 HSD17B4P51659 736 aa25.6■■□□□ 1.69
C2CD3-216ENST00000541922 FAAP100Q0VG06 881 aa25.6■■□□□ 1.69
C2CD3-216ENST00000541922 COL9A3Q14050 684 aaPredicted RBP25.6■■□□□ 1.69
C2CD3-216ENST00000541922 ARHGEF16Q5VV41 709 aa25.6■■□□□ 1.69
C2CD3-216ENST00000541922 OR6J1Q8NGC5 347 aa25.6■■□□□ 1.69
C2CD3-216ENST00000541922 MAP3K20Q9NYL2 800 aaKnown RBP25.6■■□□□ 1.69
C2CD3-216ENST00000541922 RANBP2P49792 3224 aaKnown RBP25.6■■□□□ 1.69
C2CD3-216ENST00000541922 RAG1P15918 1043 aa25.59■■□□□ 1.69
C2CD3-216ENST00000541922 GHRHRQ02643 423 aa25.59■■□□□ 1.69
C2CD3-216ENST00000541922 STXBP2Q15833 593 aa25.59■■□□□ 1.69
C2CD3-216ENST00000541922 LRIT3Q3SXY7 679 aa25.59■■□□□ 1.69
C2CD3-216ENST00000541922 SAMD3Q8N6K7 520 aa25.59■■□□□ 1.69
C2CD3-216ENST00000541922 TXNP10599 105 aaKnown RBP25.58■■□□□ 1.69
C2CD3-216ENST00000541922 EIF2AK2P19525 551 aaKnown RBP25.58■■□□□ 1.69
C2CD3-216ENST00000541922 GNAQP50148 359 aa25.58■■□□□ 1.69
C2CD3-216ENST00000541922 CPT1AP50416 773 aa25.58■■□□□ 1.69
C2CD3-216ENST00000541922 TTLL4Q14679 1199 aa25.58■■□□□ 1.69
C2CD3-216ENST00000541922 PIBF1Q8WXW3 757 aa25.58■■□□□ 1.69
C2CD3-216ENST00000541922 LRCH3Q96II8 777 aa25.58■■□□□ 1.69
C2CD3-216ENST00000541922 NEK1Q96PY6 1258 aa25.58■■□□□ 1.69
C2CD3-216ENST00000541922 SPZ1Q9BXG8 430 aa25.58■■□□□ 1.69
C2CD3-216ENST00000541922 LRRC2Q9BYS8 371 aa25.58■■□□□ 1.69
C2CD3-216ENST00000541922 KIAA1217Q5T5P2 1943 aa25.58■■□□□ 1.69
C2CD3-216ENST00000541922 TLR3O15455 904 aaKnown RBP25.57■■□□□ 1.68
C2CD3-216ENST00000541922 CALM1P0DP23 149 aa25.57■■□□□ 1.68
C2CD3-216ENST00000541922 CALM2P0DP24 149 aa25.57■■□□□ 1.68
C2CD3-216ENST00000541922 CALM3P0DP25 149 aa25.57■■□□□ 1.68
C2CD3-216ENST00000541922 BRDTQ58F21 947 aaPredicted RBP25.57■■□□□ 1.68
C2CD3-216ENST00000541922 SEPT14Q6ZU15 432 aa25.57■■□□□ 1.68
C2CD3-216ENST00000541922 LZTS2Q9BRK4 669 aa25.57■■□□□ 1.68
C2CD3-216ENST00000541922 PXMP2Q9NR77 195 aa25.57■■□□□ 1.68
C2CD3-216ENST00000541922 POLR3EQ9NVU0 708 aa25.57■■□□□ 1.68
C2CD3-216ENST00000541922 SLC12A7Q9Y666 1083 aa25.57■■□□□ 1.68
C2CD3-216ENST00000541922 ITGB8P26012 769 aa25.56■■□□□ 1.68
C2CD3-216ENST00000541922 SMARCA1P28370 1054 aa25.56■■□□□ 1.68
C2CD3-216ENST00000541922 ITGA7Q13683 1181 aa25.56■■□□□ 1.68
C2CD3-216ENST00000541922 FAM126BQ8IXS8 530 aa25.56■■□□□ 1.68
C2CD3-216ENST00000541922 RRP36Q96EU6 259 aaKnown RBP25.56■■□□□ 1.68
C2CD3-216ENST00000541922 GCOM1H8Y6P7 765 aaPredicted RBP25.55■■□□□ 1.68
C2CD3-216ENST00000541922 NR3C2P08235 984 aa25.55■■□□□ 1.68
C2CD3-216ENST00000541922 POLR2MP0CAP2 368 aa25.55■■□□□ 1.68
C2CD3-216ENST00000541922 RXRAP19793 462 aa25.55■■□□□ 1.68
C2CD3-216ENST00000541922 HOXA13P31271 388 aaPredicted RBP25.55■■□□□ 1.68
C2CD3-216ENST00000541922 TSGA10IPQ3SY00 556 aa25.55■■□□□ 1.68
C2CD3-216ENST00000541922 SLC43A3Q8NBI5 491 aa25.55■■□□□ 1.68
C2CD3-216ENST00000541922 COPS5Q92905 334 aa25.55■■□□□ 1.68
C2CD3-216ENST00000541922 SEZ6LQ9BYH1 1024 aa25.55■■□□□ 1.68
C2CD3-216ENST00000541922 TBX21Q9UL17 535 aa25.55■■□□□ 1.68
C2CD3-216ENST00000541922 EIF3JO75822 258 aaKnown RBP25.54■■□□□ 1.68
C2CD3-216ENST00000541922 ARIH2O95376 493 aa25.54■■□□□ 1.68
C2CD3-216ENST00000541922 MYL3P08590 195 aa25.54■■□□□ 1.68
C2CD3-216ENST00000541922 KRT32Q14532 448 aa25.54■■□□□ 1.68
C2CD3-216ENST00000541922 RASEFQ8IZ41 740 aa25.54■■□□□ 1.68
C2CD3-216ENST00000541922 SEC63Q9UGP8 760 aaKnown RBP25.54■■□□□ 1.68
C2CD3-216ENST00000541922 PLEKHA8P1O95397 391 aa25.53■■□□□ 1.68
C2CD3-216ENST00000541922 TIMP1P01033 207 aa25.53■■□□□ 1.68
C2CD3-216ENST00000541922 PSMC6P62333 389 aa25.53■■□□□ 1.68
C2CD3-216ENST00000541922 PURAQ00577 322 aaKnown RBP25.53■■□□□ 1.68
C2CD3-216ENST00000541922 CCDC62Q6P9F0 684 aa25.53■■□□□ 1.68
C2CD3-216ENST00000541922 SYNE3Q6ZMZ3 975 aa25.53■■□□□ 1.68
C2CD3-216ENST00000541922 DHX32Q7L7V1 743 aaKnown RBP25.53■■□□□ 1.68
C2CD3-216ENST00000541922 SGMS1Q86VZ5 419 aa25.53■■□□□ 1.68
C2CD3-216ENST00000541922 FCHSD1Q86WN1 690 aa25.53■■□□□ 1.68
C2CD3-216ENST00000541922 RAB11FIP4Q86YS3 637 aa25.53■■□□□ 1.68
C2CD3-216ENST00000541922 PDCD2LQ9BRP1 358 aa25.53■■□□□ 1.68
C2CD3-216ENST00000541922 GRIN2DO15399 1336 aa25.53■■□□□ 1.68
C2CD3-216ENST00000541922 A6NJR5 290 aa25.52■■□□□ 1.68
C2CD3-216ENST00000541922 KPNA6O60684 536 aa25.52■■□□□ 1.68
C2CD3-216ENST00000541922 CD4P01730 458 aa25.52■■□□□ 1.68
C2CD3-216ENST00000541922 MYCLP12524 364 aaPredicted RBP25.52■■□□□ 1.68
C2CD3-216ENST00000541922 SHHQ15465 462 aa25.52■■□□□ 1.68
C2CD3-216ENST00000541922 ADCK5Q3MIX3 580 aa25.52■■□□□ 1.68
C2CD3-216ENST00000541922 SRBD1Q8N5C6 995 aaKnown RBP25.52■■□□□ 1.68
C2CD3-216ENST00000541922 FANCBQ8NB91 859 aa25.52■■□□□ 1.68
C2CD3-216ENST00000541922 MTG1Q9BT17 334 aaPredicted RBP25.52■■□□□ 1.68
C2CD3-216ENST00000541922 GH1P01241 217 aa25.51■■□□□ 1.67
C2CD3-216ENST00000541922 EXOSC10Q01780 885 aaKnown RBP25.51■■□□□ 1.67
C2CD3-216ENST00000541922 FPGSQ05932 587 aa25.51■■□□□ 1.67
C2CD3-216ENST00000541922 LY6KQ17RY6 165 aa25.51■■□□□ 1.67
C2CD3-216ENST00000541922 MICU3Q86XE3 530 aa25.51■■□□□ 1.67
C2CD3-216ENST00000541922 CMTR1Q8N1G2 835 aaKnown RBP25.51■■□□□ 1.67
C2CD3-216ENST00000541922 TCEANC2Q96MN5 208 aa25.51■■□□□ 1.67
C2CD3-216ENST00000541922 PGM5Q15124 567 aa25.5■■□□□ 1.67
C2CD3-216ENST00000541922 C9orf50Q5SZB4 431 aa25.5■■□□□ 1.67
C2CD3-216ENST00000541922 GPR153Q6NV75 609 aa25.5■■□□□ 1.67
C2CD3-216ENST00000541922 MRVI1Q9Y6F6 885 aa25.5■■□□□ 1.67
C2CD3-216ENST00000541922 HMGB1P09429 215 aaKnown RBP25.49■■□□□ 1.67
C2CD3-216ENST00000541922 CCND2P30279 289 aa25.49■■□□□ 1.67
C2CD3-216ENST00000541922 MFSD5Q6N075 450 aa25.49■■□□□ 1.67
C2CD3-216ENST00000541922 APOA5Q6Q788 366 aa25.49■■□□□ 1.67
C2CD3-216ENST00000541922 VSIG10LQ86VR7 867 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms