RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 CTAGE1Q96RT6 745 aa14□□□□□ -0.17
COPA-205ENST00000541366 ZBED2Q9BTP6 218 aa14□□□□□ -0.17
COPA-205ENST00000541366 ZNF287Q9HBT7 754 aa14□□□□□ -0.17
COPA-205ENST00000541366 IL17RBQ9NRM6 502 aa14□□□□□ -0.17
COPA-205ENST00000541366 ZBTB40Q9NUA8 1239 aa14□□□□□ -0.17
COPA-205ENST00000541366 STX8Q9UNK0 236 aa14□□□□□ -0.17
COPA-205ENST00000541366 C5orf42Q9H799 3197 aa13.99□□□□□ -0.17
COPA-205ENST00000541366 TRIOO75962 3097 aa13.99□□□□□ -0.17
COPA-205ENST00000541366 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.99□□□□□ -0.17
COPA-205ENST00000541366 PTPDC1A2A3K4 754 aa13.99□□□□□ -0.17
COPA-205ENST00000541366 PRR33A8MZF0 331 aa13.99□□□□□ -0.17
COPA-205ENST00000541366 PLA2G6O60733 806 aa13.99□□□□□ -0.17
COPA-205ENST00000541366 BAIAP3O94812 1187 aa13.99□□□□□ -0.17
COPA-205ENST00000541366 ICAM1P05362 532 aa13.99□□□□□ -0.17
COPA-205ENST00000541366 SSTR3P32745 418 aaPredicted RBP13.99□□□□□ -0.17
COPA-205ENST00000541366 BFSP2Q13515 415 aa13.99□□□□□ -0.17
COPA-205ENST00000541366 FAM117BQ6P1L5 589 aa13.99□□□□□ -0.17
COPA-205ENST00000541366 NFRKBQ6P4R8 1299 aa13.99□□□□□ -0.17
COPA-205ENST00000541366 NOD1Q9Y239 953 aa13.99□□□□□ -0.17
COPA-205ENST00000541366 LINC01553A4QN01 128 aa13.98□□□□□ -0.17
COPA-205ENST00000541366 A6NJR5 290 aa13.98□□□□□ -0.17
COPA-205ENST00000541366 PATL2C9JE40 543 aaKnown RBP13.98□□□□□ -0.17
COPA-205ENST00000541366 ARIH2O95376 493 aa13.98□□□□□ -0.17
COPA-205ENST00000541366 CALML3P27482 149 aa13.98□□□□□ -0.17
COPA-205ENST00000541366 PDE4BQ07343 736 aa13.98□□□□□ -0.17
COPA-205ENST00000541366 PPP2R5BQ15173 497 aa13.98□□□□□ -0.17
COPA-205ENST00000541366 PTGISQ16647 500 aa13.98□□□□□ -0.17
COPA-205ENST00000541366 GDF6Q6KF10 455 aaPredicted RBP13.98□□□□□ -0.17
COPA-205ENST00000541366 DHX38Q92620 1227 aaKnown RBP13.98□□□□□ -0.17
COPA-205ENST00000541366 ANKS1AQ92625 1134 aa13.98□□□□□ -0.17
COPA-205ENST00000541366 LRRCC1Q9C099 1032 aa13.98□□□□□ -0.17
COPA-205ENST00000541366 ECHDC1Q9NTX5 307 aa13.98□□□□□ -0.17
COPA-205ENST00000541366 LMCD1Q9NZU5 365 aa13.98□□□□□ -0.17
COPA-205ENST00000541366 ADD3Q9UEY8 706 aaKnown RBP13.98□□□□□ -0.17
COPA-205ENST00000541366 MYO7AQ13402 2215 aa13.98□□□□□ -0.17
COPA-205ENST00000541366 NBNO60934 754 aa13.97□□□□□ -0.17
COPA-205ENST00000541366 GNAT2P19087 354 aa13.97□□□□□ -0.17
COPA-205ENST00000541366 ERVK-21P61565 698 aa13.97□□□□□ -0.17
COPA-205ENST00000541366 CTDSPL2Q05D32 466 aa13.97□□□□□ -0.17
COPA-205ENST00000541366 PPARAQ07869 468 aa13.97□□□□□ -0.17
COPA-205ENST00000541366 PDE4DQ08499 809 aa13.97□□□□□ -0.17
COPA-205ENST00000541366 CCDC96Q2M329 555 aa13.97□□□□□ -0.17
COPA-205ENST00000541366 LEXMQ3ZCV2 418 aa13.97□□□□□ -0.17
COPA-205ENST00000541366 PTCRAQ6ISU1 281 aaPredicted RBP13.97□□□□□ -0.17
COPA-205ENST00000541366 CLEC4DQ8WXI8 215 aa13.97□□□□□ -0.17
COPA-205ENST00000541366 TGS1Q96RS0 853 aaKnown RBP13.97□□□□□ -0.17
COPA-205ENST00000541366 RANBP17Q9H2T7 1088 aaKnown RBP13.97□□□□□ -0.17
COPA-205ENST00000541366 GJB5O95377 273 aa13.96□□□□□ -0.17
COPA-205ENST00000541366 TXNP10599 105 aaKnown RBP13.96□□□□□ -0.17
COPA-205ENST00000541366 NHLH1Q02575 133 aa13.96□□□□□ -0.17
COPA-205ENST00000541366 PTPN11Q06124 597 aaPredicted RBP13.96□□□□□ -0.17
COPA-205ENST00000541366 AFAP1L1Q8TED9 768 aa13.96□□□□□ -0.17
COPA-205ENST00000541366 RAD9AQ99638 391 aa13.96□□□□□ -0.17
COPA-205ENST00000541366 C17orf80Q9BSJ5 609 aa13.96□□□□□ -0.17
COPA-205ENST00000541366 NAPBQ9H115 298 aa13.96□□□□□ -0.17
COPA-205ENST00000541366 GPCPD1Q9NPB8 672 aa13.96□□□□□ -0.17
COPA-205ENST00000541366 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.96□□□□□ -0.17
COPA-205ENST00000541366 SIP14410 1827 aa13.96□□□□□ -0.17
COPA-205ENST00000541366 FRMPD2Q68DX3 1309 aaPredicted RBP13.95□□□□□ -0.18
COPA-205ENST00000541366 GRXCR2A6NFK2 248 aa13.95□□□□□ -0.18
COPA-205ENST00000541366 TSPY2A6NKD2 308 aa13.95□□□□□ -0.18
COPA-205ENST00000541366 H3BQ06 376 aaPredicted RBP13.95□□□□□ -0.18
COPA-205ENST00000541366 SELPP16109 830 aa13.95□□□□□ -0.18
COPA-205ENST00000541366 HNRNPUQ00839 825 aaKnown RBP eCLIP13.95□□□□□ -0.18
COPA-205ENST00000541366 LRRFIP1Q32MZ4 808 aaKnown RBP13.95□□□□□ -0.18
COPA-205ENST00000541366 BRDTQ58F21 947 aaPredicted RBP13.95□□□□□ -0.18
COPA-205ENST00000541366 SYDE2Q5VT97 1194 aa13.95□□□□□ -0.18
COPA-205ENST00000541366 CNKSR3Q6P9H4 555 aa13.95□□□□□ -0.18
COPA-205ENST00000541366 LRRC8DQ7L1W4 858 aa13.95□□□□□ -0.18
COPA-205ENST00000541366 SCFD2Q8WU76 684 aa13.95□□□□□ -0.18
COPA-205ENST00000541366 AFG1LQ8WV93 481 aa13.95□□□□□ -0.18
COPA-205ENST00000541366 KAT2BQ92831 832 aa13.95□□□□□ -0.18
COPA-205ENST00000541366 FBXL18Q96ME1 805 aa13.95□□□□□ -0.18
COPA-205ENST00000541366 DDX19BQ9UMR2 479 aa13.95□□□□□ -0.18
COPA-205ENST00000541366 RAD50Q92878 1312 aa13.94□□□□□ -0.18
COPA-205ENST00000541366 NKRFO15226 690 aaKnown RBP eCLIP13.94□□□□□ -0.18
COPA-205ENST00000541366 FOXP2O15409 715 aa13.94□□□□□ -0.18
COPA-205ENST00000541366 KPNA6O60684 536 aa13.94□□□□□ -0.18
COPA-205ENST00000541366 CXCL10P02778 98 aa13.94□□□□□ -0.18
COPA-205ENST00000541366 CKBP12277 381 aa13.94□□□□□ -0.18
COPA-205ENST00000541366 EDNRBP24530 442 aa13.94□□□□□ -0.18
COPA-205ENST00000541366 RPS6P62753 249 aaKnown RBP13.94□□□□□ -0.18
COPA-205ENST00000541366 RNF207Q6ZRF8 634 aa13.94□□□□□ -0.18
COPA-205ENST00000541366 CHST3Q7LGC8 479 aa13.94□□□□□ -0.18
COPA-205ENST00000541366 CAGE1Q8TC20 777 aa13.94□□□□□ -0.18
COPA-205ENST00000541366 WNT8BQ93098 351 aa13.94□□□□□ -0.18
COPA-205ENST00000541366 NACAP1Q9BZK3 213 aa13.94□□□□□ -0.18
COPA-205ENST00000541366 ZNF318Q5VUA4 2279 aa13.94□□□□□ -0.18
COPA-205ENST00000541366 USP34Q70CQ2 3546 aa13.93□□□□□ -0.18
COPA-205ENST00000541366 RANBP6O60518 1105 aaKnown RBP13.93□□□□□ -0.18
COPA-205ENST00000541366 ZFYP08048 801 aaPredicted RBP13.93□□□□□ -0.18
COPA-205ENST00000541366 SLC3A2P08195 630 aaKnown RBP13.93□□□□□ -0.18
COPA-205ENST00000541366 MBTPS1Q14703 1052 aa13.93□□□□□ -0.18
COPA-205ENST00000541366 LY6KQ17RY6 165 aa13.93□□□□□ -0.18
COPA-205ENST00000541366 CSPP1Q1MSJ5 1256 aa13.93□□□□□ -0.18
COPA-205ENST00000541366 TRAF7Q6Q0C0 670 aa13.93□□□□□ -0.18
COPA-205ENST00000541366 BTNL9Q6UXG8 535 aa13.93□□□□□ -0.18
COPA-205ENST00000541366 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.93□□□□□ -0.181e-14■■■■■ 30
COPA-205ENST00000541366 CCDC155Q8N6L0 562 aa13.93□□□□□ -0.18
COPA-205ENST00000541366 FBXO22Q8NEZ5 403 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms