RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 ANAPC15P60006 121 aa15.15■□□□□ 0.02
LTBR-208ENST00000541005 FGD1P98174 961 aa15.15■□□□□ 0.02
LTBR-208ENST00000541005 LRRC26Q2I0M4 334 aa15.15■□□□□ 0.02
LTBR-208ENST00000541005 DUSP28Q4G0W2 176 aa15.15■□□□□ 0.02
LTBR-208ENST00000541005 C1orf53Q5VUE5 145 aa15.15■□□□□ 0.02
LTBR-208ENST00000541005 RUFY3Q7L099 469 aa15.15■□□□□ 0.02
LTBR-208ENST00000541005 EEPD1Q7L9B9 569 aa15.15■□□□□ 0.02
LTBR-208ENST00000541005 CMTR1Q8N1G2 835 aaKnown RBP15.15■□□□□ 0.02
LTBR-208ENST00000541005 SPC25Q9HBM1 224 aa15.15■□□□□ 0.02
LTBR-208ENST00000541005 PXMP2Q9NR77 195 aa15.15■□□□□ 0.02
LTBR-208ENST00000541005 PDGFCQ9NRA1 345 aa15.15■□□□□ 0.02
LTBR-208ENST00000541005 FAM217BQ9NTX9 383 aaPredicted RBP15.15■□□□□ 0.02
LTBR-208ENST00000541005 DNAH12Q6ZR08 3092 aa15.15■□□□□ 0.02
LTBR-208ENST00000541005 MYADML2A6NDP7 307 aa15.14■□□□□ 0.01
LTBR-208ENST00000541005 GOLGA8AA7E2F4 631 aa15.14■□□□□ 0.01
LTBR-208ENST00000541005 GOLGA8BA8MQT2 603 aa15.14■□□□□ 0.01
LTBR-208ENST00000541005 GCOM1H8Y6P7 765 aaPredicted RBP15.14■□□□□ 0.01
LTBR-208ENST00000541005 PIK3CDO00329 1044 aa15.14■□□□□ 0.01
LTBR-208ENST00000541005 POLR2MP0CAP2 368 aa15.14■□□□□ 0.01
LTBR-208ENST00000541005 APOBRQ0VD83 1088 aa15.14■□□□□ 0.01
LTBR-208ENST00000541005 TLK2Q86UE8 772 aa15.14■□□□□ 0.01
LTBR-208ENST00000541005 TEX2Q8IWB9 1127 aa15.14■□□□□ 0.01
LTBR-208ENST00000541005 PCSK9Q8NBP7 692 aaKnown RBP15.14■□□□□ 0.01
LTBR-208ENST00000541005 SCFD2Q8WU76 684 aa15.14■□□□□ 0.01
LTBR-208ENST00000541005 BRF1Q92994 677 aa15.14■□□□□ 0.01
LTBR-208ENST00000541005 CYP46A1Q9Y6A2 500 aa15.14■□□□□ 0.01
LTBR-208ENST00000541005 CCDC196A0A1B0GTZ2 297 aa15.13■□□□□ 0.01
LTBR-208ENST00000541005 A0A1W2PQ45 241 aaPredicted RBP15.13■□□□□ 0.01
LTBR-208ENST00000541005 A0A1W2PQY0 241 aa15.13■□□□□ 0.01
LTBR-208ENST00000541005 NKRFO15226 690 aaKnown RBP eCLIP15.13■□□□□ 0.01
LTBR-208ENST00000541005 C6orf222P0C671 652 aaPredicted RBP15.13■□□□□ 0.01
LTBR-208ENST00000541005 CDC27P30260 824 aa15.13■□□□□ 0.01
LTBR-208ENST00000541005 HOXA13P31271 388 aaPredicted RBP15.13■□□□□ 0.01
LTBR-208ENST00000541005 ACLYP53396 1101 aa15.13■□□□□ 0.01
LTBR-208ENST00000541005 ARHGEF16Q5VV41 709 aa15.13■□□□□ 0.01
LTBR-208ENST00000541005 SLC39A5Q6ZMH5 540 aa15.13■□□□□ 0.01
LTBR-208ENST00000541005 PIBF1Q8WXW3 757 aa15.13■□□□□ 0.01
LTBR-208ENST00000541005 PDCD2LQ9BRP1 358 aa15.13■□□□□ 0.01
LTBR-208ENST00000541005 WDR11Q9BZH6 1224 aa15.13■□□□□ 0.01
LTBR-208ENST00000541005 hCG_1984214I3L0E3 225 aa15.12■□□□□ 0.01
LTBR-208ENST00000541005 MYCNP04198 464 aaPredicted RBP15.12■□□□□ 0.01
LTBR-208ENST00000541005 NR3C2P08235 984 aa15.12■□□□□ 0.01
LTBR-208ENST00000541005 EIF2AK2P19525 551 aaKnown RBP15.12■□□□□ 0.01
LTBR-208ENST00000541005 METAP2P50579 478 aaKnown RBP eCLIP15.12■□□□□ 0.01
LTBR-208ENST00000541005 TOB2Q14106 344 aaPredicted RBP15.12■□□□□ 0.01
LTBR-208ENST00000541005 STXBP2Q15833 593 aa15.12■□□□□ 0.01
LTBR-208ENST00000541005 KCNA10Q16322 511 aa15.12■□□□□ 0.01
LTBR-208ENST00000541005 FSCN1Q16658 493 aaKnown RBP15.12■□□□□ 0.01
LTBR-208ENST00000541005 PPP1R18Q6NYC8 613 aa15.12■□□□□ 0.01
LTBR-208ENST00000541005 CCDC62Q6P9F0 684 aa15.12■□□□□ 0.01
LTBR-208ENST00000541005 C7orf61Q8IZ16 206 aa15.12■□□□□ 0.01
LTBR-208ENST00000541005 ZNF713Q8N859 430 aaPredicted RBP15.12■□□□□ 0.01
LTBR-208ENST00000541005 AP5M1Q9H0R1 490 aa15.12■□□□□ 0.01
LTBR-208ENST00000541005 ELP1O95163 1332 aa15.12■□□□□ 0.01
LTBR-208ENST00000541005 MEIS2O14770 477 aa15.11■□□□□ 0.01
LTBR-208ENST00000541005 EIF3JO75822 258 aaKnown RBP15.11■□□□□ 0.01
LTBR-208ENST00000541005 ATN1P54259 1190 aaPredicted RBP15.11■□□□□ 0.01
LTBR-208ENST00000541005 RTP1P59025 263 aa15.11■□□□□ 0.01
LTBR-208ENST00000541005 IRX5P78411 483 aaPredicted RBP15.11■□□□□ 0.01
LTBR-208ENST00000541005 TTLL4Q14679 1199 aa15.11■□□□□ 0.01
LTBR-208ENST00000541005 PGM5Q15124 567 aa15.11■□□□□ 0.01
LTBR-208ENST00000541005 GNASQ5JWF2 1037 aa15.11■□□□□ 0.01
LTBR-208ENST00000541005 TMEM63BQ5T3F8 832 aa15.11■□□□□ 0.01
LTBR-208ENST00000541005 NOL8Q76FK4 1167 aaKnown RBP15.11■□□□□ 0.01
LTBR-208ENST00000541005 hCG_1642624A0A1W2PR95 340 aa15.1■□□□□ 0.01
LTBR-208ENST00000541005 ASGR1P07306 291 aa15.1■□□□□ 0.01
LTBR-208ENST00000541005 PTGS1P23219 599 aa15.1■□□□□ 0.01
LTBR-208ENST00000541005 WWC2Q6AWC2 1192 aa15.1■□□□□ 0.01
LTBR-208ENST00000541005 VSIG10LQ86VR7 867 aa15.1■□□□□ 0.01
LTBR-208ENST00000541005 CCDC82Q8N4S0 544 aa15.1■□□□□ 0.01
LTBR-208ENST00000541005 IL31RAQ8NI17 732 aa15.1■□□□□ 0.01
LTBR-208ENST00000541005 CUL5Q93034 780 aa15.1■□□□□ 0.01
LTBR-208ENST00000541005 FERMT2Q96AC1 680 aa15.1■□□□□ 0.01
LTBR-208ENST00000541005 UPF3BQ9BZI7 483 aaKnown RBP15.1■□□□□ 0.01
LTBR-208ENST00000541005 STARD7Q9NQZ5 370 aa15.1■□□□□ 0.01
LTBR-208ENST00000541005 RBM27Q9P2N5 1060 aaKnown RBP15.1■□□□□ 0.01
LTBR-208ENST00000541005 KAT6AQ92794 2004 aa15.09■□□□□ 0.01
LTBR-208ENST00000541005 DYNC1LI2O43237 492 aaPredicted RBP15.09■□□□□ 0.01
LTBR-208ENST00000541005 ZEB2O60315 1214 aa15.09■□□□□ 0.01
LTBR-208ENST00000541005 STAM2O75886 525 aa15.09■□□□□ 0.01
LTBR-208ENST00000541005 CABYRO75952 493 aa15.09■□□□□ 0.01
LTBR-208ENST00000541005 ARIH2O95376 493 aa15.09■□□□□ 0.01
LTBR-208ENST00000541005 PDIA3P30101 505 aaKnown RBP15.09■□□□□ 0.01
LTBR-208ENST00000541005 CCND2P30279 289 aa15.09■□□□□ 0.01
LTBR-208ENST00000541005 ADD1P35611 737 aaKnown RBP15.09■□□□□ 0.01
LTBR-208ENST00000541005 BEX3Q00994 111 aa15.09■□□□□ 0.01
LTBR-208ENST00000541005 NTRK3Q16288 839 aa15.09■□□□□ 0.01
LTBR-208ENST00000541005 TRIM60Q495X7 471 aa15.09■□□□□ 0.01
LTBR-208ENST00000541005 USP17L6PQ6QN14 398 aa15.09■□□□□ 0.01
LTBR-208ENST00000541005 HEATR3Q7Z4Q2 680 aa15.09■□□□□ 0.01
LTBR-208ENST00000541005 FCHSD1Q86WN1 690 aa15.09■□□□□ 0.01
LTBR-208ENST00000541005 GPKOWQ92917 476 aaPredicted RBP eCLIP15.09■□□□□ 0.01
LTBR-208ENST00000541005 ZNF274Q96GC6 653 aaPredicted RBP15.09■□□□□ 0.01
LTBR-208ENST00000541005 GLT1D1Q96MS3 346 aa15.09■□□□□ 0.01
LTBR-208ENST00000541005 ALDH8A1Q9H2A2 487 aaPredicted RBP15.09■□□□□ 0.01
LTBR-208ENST00000541005 PRO3102Q9H379 93 aa15.09■□□□□ 0.01
LTBR-208ENST00000541005 PSTPIP2Q9H939 334 aa15.09■□□□□ 0.01
LTBR-208ENST00000541005 NAP1L2Q9ULW6 460 aaPredicted RBP15.09■□□□□ 0.01
LTBR-208ENST00000541005 V9GY48 417 aaPredicted RBP15.09■□□□□ 0.01
LTBR-208ENST00000541005 WDR81Q562E7 1941 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms