RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 TNNI2P48788 182 aa5.79□□□□□ -1.48
PROM1-220ENST00000540805 USP4Q13107 963 aa5.79□□□□□ -1.48
PROM1-220ENST00000540805 IFIT1BQ5T764 474 aaKnown RBP5.79□□□□□ -1.48
PROM1-220ENST00000540805 PAPD7Q5XG87 772 aaKnown RBP5.79□□□□□ -1.48
PROM1-220ENST00000540805 TBC1D9BQ66K14 1250 aa5.79□□□□□ -1.48
PROM1-220ENST00000540805 CHADLQ6NUI6 762 aa5.79□□□□□ -1.48
PROM1-220ENST00000540805 USP49Q70CQ1 688 aa5.79□□□□□ -1.48
PROM1-220ENST00000540805 KIAA1328Q86T90 577 aa5.79□□□□□ -1.48
PROM1-220ENST00000540805 JAKMIP2Q96AA8 810 aa5.79□□□□□ -1.48
PROM1-220ENST00000540805 AATFQ9NY61 560 aaKnown RBP eCLIP5.79□□□□□ -1.48
PROM1-220ENST00000540805 GRIN2DO15399 1336 aa5.79□□□□□ -1.48
PROM1-220ENST00000540805 ATXN2Q99700 1313 aaKnown RBP5.79□□□□□ -1.48
PROM1-220ENST00000540805 ANKRD62A6NC57 917 aa5.79□□□□□ -1.48
PROM1-220ENST00000540805 PPP1R3GB7ZBB8 358 aa5.79□□□□□ -1.48
PROM1-220ENST00000540805 OPLAHO14841 1288 aa5.79□□□□□ -1.48
PROM1-220ENST00000540805 KRT86O43790 486 aa5.79□□□□□ -1.48
PROM1-220ENST00000540805 COBLO75128 1261 aa5.79□□□□□ -1.48
PROM1-220ENST00000540805 MYBL2P10244 700 aa5.79□□□□□ -1.48
PROM1-220ENST00000540805 IFNAR1P17181 557 aa5.79□□□□□ -1.48
PROM1-220ENST00000540805 SLC10A5Q5PT55 438 aa5.79□□□□□ -1.48
PROM1-220ENST00000540805 B4GALNT4Q76KP1 1039 aa5.79□□□□□ -1.48
PROM1-220ENST00000540805 SND1Q7KZF4 910 aaKnown RBP eCLIP5.79□□□□□ -1.48
PROM1-220ENST00000540805 ADGRA1Q86SQ6 560 aa5.79□□□□□ -1.48
PROM1-220ENST00000540805 SGMS1Q86VZ5 419 aa5.79□□□□□ -1.48
PROM1-220ENST00000540805 TEX11Q8IYF3 940 aa5.79□□□□□ -1.48
PROM1-220ENST00000540805 ESR2Q92731 530 aa5.79□□□□□ -1.48
PROM1-220ENST00000540805 CCDC97Q96F63 343 aaPredicted RBP5.79□□□□□ -1.48
PROM1-220ENST00000540805 PAGE5Q96GU1 130 aa5.79□□□□□ -1.48
PROM1-220ENST00000540805 CABS1Q96KC9 395 aa5.79□□□□□ -1.48
PROM1-220ENST00000540805 PSMD1Q99460 953 aa5.79□□□□□ -1.48
PROM1-220ENST00000540805 CHP1Q99653 195 aa5.79□□□□□ -1.48
PROM1-220ENST00000540805 LY9Q9HBG7 655 aa5.79□□□□□ -1.48
PROM1-220ENST00000540805 FAM217BQ9NTX9 383 aaPredicted RBP5.79□□□□□ -1.48
PROM1-220ENST00000540805 REXO2Q9Y3B8 237 aaKnown RBP5.79□□□□□ -1.48
PROM1-220ENST00000540805 MAGEB6P1A0A0J9YX57 407 aa5.79□□□□□ -1.48
PROM1-220ENST00000540805 A6NNZ2 444 aa5.79□□□□□ -1.48
PROM1-220ENST00000540805 PPIP5K2O43314 1243 aa5.79□□□□□ -1.48
PROM1-220ENST00000540805 CASP1P29466 404 aa5.79□□□□□ -1.48
PROM1-220ENST00000540805 ADD2P35612 726 aa5.79□□□□□ -1.48
PROM1-220ENST00000540805 KRT83P78385 493 aa5.79□□□□□ -1.48
PROM1-220ENST00000540805 DPYDQ12882 1025 aa5.79□□□□□ -1.48
PROM1-220ENST00000540805 PSMD2Q13200 908 aa5.79□□□□□ -1.48
PROM1-220ENST00000540805 NR5A1Q13285 461 aa5.79□□□□□ -1.48
PROM1-220ENST00000540805 DOK7Q18PE1 504 aa5.79□□□□□ -1.48
PROM1-220ENST00000540805 TMEM266Q2M3C6 531 aa5.79□□□□□ -1.48
PROM1-220ENST00000540805 TUBB8Q3ZCM7 444 aa5.79□□□□□ -1.48
PROM1-220ENST00000540805 ACCSLQ4AC99 568 aa5.79□□□□□ -1.48
PROM1-220ENST00000540805 ERFEQ4G0M1 354 aa5.79□□□□□ -1.48
PROM1-220ENST00000540805 RRAGBQ5VZM2 374 aa5.79□□□□□ -1.48
PROM1-220ENST00000540805 CLEC4GQ6UXB4 293 aa5.79□□□□□ -1.48
PROM1-220ENST00000540805 SH3RF1Q7Z6J0 888 aa5.79□□□□□ -1.48
PROM1-220ENST00000540805 SPATS2Q86XZ4 545 aaKnown RBP5.79□□□□□ -1.48
PROM1-220ENST00000540805 SYCP3Q8IZU3 236 aa5.79□□□□□ -1.48
PROM1-220ENST00000540805 EYA3Q99504 573 aa5.79□□□□□ -1.48
PROM1-220ENST00000540805 TCP11L1Q9NUJ3 509 aa5.79□□□□□ -1.48
PROM1-220ENST00000540805 TRPC5Q9UL62 973 aaPredicted RBP5.79□□□□□ -1.48
PROM1-220ENST00000540805 BAZ2AQ9UIF9 1905 aaKnown RBP5.78□□□□□ -1.48
PROM1-220ENST00000540805 KCNJ18B7U540 433 aa5.78□□□□□ -1.48
PROM1-220ENST00000540805 RNF225M0QZC1 329 aaPredicted RBP5.78□□□□□ -1.48
PROM1-220ENST00000540805 NDUFAB1O14561 156 aa5.78□□□□□ -1.48
PROM1-220ENST00000540805 GUCY1A2P33402 732 aa5.78□□□□□ -1.48
PROM1-220ENST00000540805 UBXN1Q04323 297 aa5.78□□□□□ -1.48
PROM1-220ENST00000540805 C2orf54Q08AI8 447 aa5.78□□□□□ -1.48
PROM1-220ENST00000540805 RASGRF1Q13972 1273 aa5.78□□□□□ -1.48
PROM1-220ENST00000540805 KCNJ12Q14500 433 aa5.78□□□□□ -1.48
PROM1-220ENST00000540805 SF3B3Q15393 1217 aaKnown RBP5.78□□□□□ -1.48
PROM1-220ENST00000540805 RC3H1Q5TC82 1133 aaKnown RBP5.78□□□□□ -1.48
PROM1-220ENST00000540805 KIAA0825Q8IV33 1275 aa5.78□□□□□ -1.48
PROM1-220ENST00000540805 OR8K1Q8NGG5 319 aa5.78□□□□□ -1.48
PROM1-220ENST00000540805 IGDCC4Q8TDY8 1250 aa5.78□□□□□ -1.48
PROM1-220ENST00000540805 AENQ8WTP8 325 aaKnown RBP5.78□□□□□ -1.48
PROM1-220ENST00000540805 PLIN2Q99541 437 aa5.78□□□□□ -1.48
PROM1-220ENST00000540805 RAB34Q9BZG1 259 aa5.78□□□□□ -1.48
PROM1-220ENST00000540805 DDX20Q9UHI6 824 aaKnown RBP5.78□□□□□ -1.48
PROM1-220ENST00000540805 MCM8Q9UJA3 840 aa5.78□□□□□ -1.48
PROM1-220ENST00000540805 ODF2LQ9ULJ1 636 aa5.78□□□□□ -1.48
PROM1-220ENST00000540805 DUOX1Q9NRD9 1551 aa5.78□□□□□ -1.48
PROM1-220ENST00000540805 MROH5Q6ZUA9 1318 aa5.78□□□□□ -1.48
PROM1-220ENST00000540805 A0A087X0B3 334 aa5.78□□□□□ -1.48
PROM1-220ENST00000540805 ANO9A1A5B4 782 aa5.78□□□□□ -1.48
PROM1-220ENST00000540805 TRIM75PA6NK02 468 aa5.78□□□□□ -1.48
PROM1-220ENST00000540805 HSF2BPO75031 334 aa5.78□□□□□ -1.48
PROM1-220ENST00000540805 DEXIO95424 95 aa5.78□□□□□ -1.48
PROM1-220ENST00000540805 CALM1P0DP23 149 aa5.78□□□□□ -1.48
PROM1-220ENST00000540805 CALM2P0DP24 149 aa5.78□□□□□ -1.48
PROM1-220ENST00000540805 CALM3P0DP25 149 aa5.78□□□□□ -1.48
PROM1-220ENST00000540805 HIBADHP31937 336 aaKnown RBP5.78□□□□□ -1.48
PROM1-220ENST00000540805 CYLC1P35663 651 aaPredicted RBP5.78□□□□□ -1.48
PROM1-220ENST00000540805 LIFRP42702 1097 aa5.78□□□□□ -1.48
PROM1-220ENST00000540805 ATP1A2P50993 1020 aa5.78□□□□□ -1.48
PROM1-220ENST00000540805 HERVK_113P62684 666 aa5.78□□□□□ -1.48
PROM1-220ENST00000540805 GTF2IP78347 998 aa5.78□□□□□ -1.48
PROM1-220ENST00000540805 PAK1Q13153 545 aa5.78□□□□□ -1.48
PROM1-220ENST00000540805 NAA25Q14CX7 972 aa5.78□□□□□ -1.48
PROM1-220ENST00000540805 RTN1Q16799 776 aa5.78□□□□□ -1.48
PROM1-220ENST00000540805 TCP11X2Q5H9J9 407 aa5.78□□□□□ -1.48
PROM1-220ENST00000540805 THEMIS2Q5TEJ8 643 aa5.78□□□□□ -1.48
PROM1-220ENST00000540805 DNAJC14Q6Y2X3 702 aaPredicted RBP5.78□□□□□ -1.48
PROM1-220ENST00000540805 MICALCLQ6ZW33 695 aa5.78□□□□□ -1.48
PROM1-220ENST00000540805 MAEAQ7L5Y9 396 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms