RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 ELNP15502 786 aa12.16□□□□□ -0.46
ATL3-204ENST00000540699 FOSBP53539 338 aa12.16□□□□□ -0.46
ATL3-204ENST00000540699 UBXN2AP68543 259 aa12.16□□□□□ -0.46
ATL3-204ENST00000540699 MAP3K21Q5TCX8 1036 aa12.16□□□□□ -0.46
ATL3-204ENST00000540699 UBE2Q1Q7Z7E8 422 aa12.16□□□□□ -0.46
ATL3-204ENST00000540699 FERMT3Q86UX7 667 aa12.16□□□□□ -0.46
ATL3-204ENST00000540699 TEX2Q8IWB9 1127 aa12.16□□□□□ -0.46
ATL3-204ENST00000540699 TRIM22Q8IYM9 498 aa12.16□□□□□ -0.46
ATL3-204ENST00000540699 CCDC82Q8N4S0 544 aa12.16□□□□□ -0.46
ATL3-204ENST00000540699 MSL3Q8N5Y2 521 aaKnown RBP12.16□□□□□ -0.46
ATL3-204ENST00000540699 TMEM87AQ8NBN3 555 aa12.16□□□□□ -0.46
ATL3-204ENST00000540699 WASF1Q92558 559 aa12.16□□□□□ -0.46
ATL3-204ENST00000540699 ZSCAN16Q9H4T2 348 aaPredicted RBP12.16□□□□□ -0.46
ATL3-204ENST00000540699 GJB4Q9NTQ9 266 aa12.16□□□□□ -0.46
ATL3-204ENST00000540699 MAP3K20Q9NYL2 800 aaKnown RBP12.16□□□□□ -0.46
ATL3-204ENST00000540699 FLRT1Q9NZU1 646 aa12.16□□□□□ -0.46
ATL3-204ENST00000540699 SEC63Q9UGP8 760 aaKnown RBP12.16□□□□□ -0.46
ATL3-204ENST00000540699 LAMA3Q16787 3333 aa12.16□□□□□ -0.46
ATL3-204ENST00000540699 ASTN1O14525 1302 aa12.15□□□□□ -0.46
ATL3-204ENST00000540699 LOC102724159A0A0B4J2E5 919 aa12.15□□□□□ -0.46
ATL3-204ENST00000540699 SOWAHBA6NEL2 793 aa12.15□□□□□ -0.46
ATL3-204ENST00000540699 POTEB2H3BUK9 544 aa12.15□□□□□ -0.46
ATL3-204ENST00000540699 hCG_1984214I3L0E3 225 aa12.15□□□□□ -0.46
ATL3-204ENST00000540699 HSD17B4P51659 736 aa12.15□□□□□ -0.46
ATL3-204ENST00000540699 RPS6P62753 249 aaKnown RBP12.15□□□□□ -0.46
ATL3-204ENST00000540699 GUCY1B3Q02153 619 aa12.15□□□□□ -0.46
ATL3-204ENST00000540699 BAATQ14032 418 aaPredicted RBP12.15□□□□□ -0.46
ATL3-204ENST00000540699 PWP2Q15269 919 aaKnown RBP12.15□□□□□ -0.46
ATL3-204ENST00000540699 CCL14Q16627 93 aa12.15□□□□□ -0.46
ATL3-204ENST00000540699 PFKFB3Q16875 520 aaPredicted RBP12.15□□□□□ -0.46
ATL3-204ENST00000540699 KRT40Q6A162 431 aa12.15□□□□□ -0.46
ATL3-204ENST00000540699 MCTP1Q6DN14 999 aa12.15□□□□□ -0.46
ATL3-204ENST00000540699 PPP1R18Q6NYC8 613 aa12.15□□□□□ -0.46
ATL3-204ENST00000540699 MAMDC4Q6UXC1 1216 aa12.15□□□□□ -0.46
ATL3-204ENST00000540699 SLC30A10Q6XR72 485 aa12.15□□□□□ -0.46
ATL3-204ENST00000540699 RNF207Q6ZRF8 634 aa12.15□□□□□ -0.46
ATL3-204ENST00000540699 MCF2L2Q86YR7 1114 aa12.15□□□□□ -0.46
ATL3-204ENST00000540699 ZNF713Q8N859 430 aaPredicted RBP12.15□□□□□ -0.46
ATL3-204ENST00000540699 MORC4Q8TE76 937 aa12.15□□□□□ -0.46
ATL3-204ENST00000540699 PIBF1Q8WXW3 757 aa12.15□□□□□ -0.46
ATL3-204ENST00000540699 RNF208Q9H0X6 261 aa12.15□□□□□ -0.46
ATL3-204ENST00000540699 LMBRD1Q9NUN5 540 aa12.15□□□□□ -0.46
ATL3-204ENST00000540699 BIN2Q9UBW5 565 aaPredicted RBP12.15□□□□□ -0.46
ATL3-204ENST00000540699 V9GY48 417 aaPredicted RBP12.15□□□□□ -0.46
ATL3-204ENST00000540699 hCG_1642624A0A1W2PR95 340 aa12.14□□□□□ -0.47
ATL3-204ENST00000540699 INHAP05111 366 aa12.14□□□□□ -0.47
ATL3-204ENST00000540699 PTMSP20962 102 aa12.14□□□□□ -0.47
ATL3-204ENST00000540699 CNTN2Q02246 1040 aa12.14□□□□□ -0.47
ATL3-204ENST00000540699 DNM1Q05193 864 aaKnown RBP12.14□□□□□ -0.47
ATL3-204ENST00000540699 WWC2Q6AWC2 1192 aa12.14□□□□□ -0.47
ATL3-204ENST00000540699 NSMFQ6X4W1 530 aa12.14□□□□□ -0.47
ATL3-204ENST00000540699 SYTL5Q8TDW5 730 aaPredicted RBP12.14□□□□□ -0.47
ATL3-204ENST00000540699 TBC1D5Q92609 795 aa12.14□□□□□ -0.47
ATL3-204ENST00000540699 TINF2Q9BSI4 451 aa12.14□□□□□ -0.47
ATL3-204ENST00000540699 ANP32EQ9BTT0 268 aa12.14□□□□□ -0.47
ATL3-204ENST00000540699 UNC93B1Q9H1C4 597 aa12.14□□□□□ -0.47
ATL3-204ENST00000540699 BARHL2Q9NY43 387 aa12.14□□□□□ -0.47
ATL3-204ENST00000540699 SYNGAP1Q96PV0 1343 aa12.13□□□□□ -0.47
ATL3-204ENST00000540699 KIF28PB7ZC32 967 aa12.13□□□□□ -0.47
ATL3-204ENST00000540699 GOLGA6L22H0YM25 854 aa12.13□□□□□ -0.47
ATL3-204ENST00000540699 STXBP3O00186 592 aa12.13□□□□□ -0.47
ATL3-204ENST00000540699 PIK3CDO00329 1044 aa12.13□□□□□ -0.47
ATL3-204ENST00000540699 SCG2P13521 617 aa12.13□□□□□ -0.47
ATL3-204ENST00000540699 TRIM32Q13049 653 aa12.13□□□□□ -0.47
ATL3-204ENST00000540699 TYW1BQ6NUM6 668 aa12.13□□□□□ -0.47
ATL3-204ENST00000540699 FAM173BQ6P4H8 233 aa12.13□□□□□ -0.47
ATL3-204ENST00000540699 DNERQ8NFT8 737 aa12.13□□□□□ -0.47
ATL3-204ENST00000540699 U2AF1L4Q8WU68 220 aaKnown RBP12.13□□□□□ -0.47
ATL3-204ENST00000540699 DPF3Q92784 378 aa12.13□□□□□ -0.47
ATL3-204ENST00000540699 COL20A1Q9P218 1284 aa12.13□□□□□ -0.47
ATL3-204ENST00000540699 ADD3Q9UEY8 706 aaKnown RBP12.13□□□□□ -0.47
ATL3-204ENST00000540699 NRBP1Q9UHY1 535 aa12.13□□□□□ -0.47
ATL3-204ENST00000540699 CNPY2Q9Y2B0 182 aa12.13□□□□□ -0.47
ATL3-204ENST00000540699 FRMPD4Q14CM0 1322 aa12.12□□□□□ -0.47
ATL3-204ENST00000540699 ESYT2A0FGR8 921 aa12.12□□□□□ -0.47
ATL3-204ENST00000540699 DLL1O00548 723 aa12.12□□□□□ -0.47
ATL3-204ENST00000540699 MEIS2O14770 477 aa12.12□□□□□ -0.47
ATL3-204ENST00000540699 MMP1P03956 469 aa12.12□□□□□ -0.47
ATL3-204ENST00000540699 CYBAP13498 195 aa12.12□□□□□ -0.47
ATL3-204ENST00000540699 EDNRBP24530 442 aa12.12□□□□□ -0.47
ATL3-204ENST00000540699 U2AF2P26368 475 aaKnown RBP eCLIP12.12□□□□□ -0.47
ATL3-204ENST00000540699 CYP2C19P33261 490 aa12.12□□□□□ -0.47
ATL3-204ENST00000540699 AKAP17AQ02040 695 aaKnown RBP12.12□□□□□ -0.47
ATL3-204ENST00000540699 CACNB2Q08289 660 aaPredicted RBP12.12□□□□□ -0.47
ATL3-204ENST00000540699 NPY5RQ15761 445 aa12.12□□□□□ -0.47
ATL3-204ENST00000540699 FOXD4L6Q3SYB3 417 aaPredicted RBP12.12□□□□□ -0.47
ATL3-204ENST00000540699 MFSD14CQ5VZR4 134 aa12.12□□□□□ -0.47
ATL3-204ENST00000540699 FOXD4L3Q6VB84 417 aaPredicted RBP12.12□□□□□ -0.47
ATL3-204ENST00000540699 CHRDL2Q6WN34 429 aa12.12□□□□□ -0.47
ATL3-204ENST00000540699 HEATR3Q7Z4Q2 680 aa12.12□□□□□ -0.47
ATL3-204ENST00000540699 BRAPQ7Z569 592 aa12.12□□□□□ -0.47
ATL3-204ENST00000540699 FAM177A1Q8N128 213 aaPredicted RBP12.12□□□□□ -0.47
ATL3-204ENST00000540699 GPKOWQ92917 476 aaPredicted RBP eCLIP12.12□□□□□ -0.47
ATL3-204ENST00000540699 PURBQ96QR8 312 aaKnown RBP12.12□□□□□ -0.47
ATL3-204ENST00000540699 PHF20Q9BVI0 1012 aa12.12□□□□□ -0.47
ATL3-204ENST00000540699 KATNBL1Q9H079 304 aa12.12□□□□□ -0.47
ATL3-204ENST00000540699 DNAH12Q6ZR08 3092 aa12.12□□□□□ -0.47
ATL3-204ENST00000540699 MYH7BA7E2Y1 1941 aa12.11□□□□□ -0.47
ATL3-204ENST00000540699 ASB14A6NK59 587 aa12.11□□□□□ -0.47
ATL3-204ENST00000540699 GCOM1H8Y6P7 765 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms