RNA–Protein interactions for RNA: ENST00000540550.6

TSFM-207, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 2 BASIC

Gene TSFM, Length 1,935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-207ENST00000540550 UPF1Q92900 1129 aaKnown RBP eCLIP16.68■□□□□ 0.26
TSFM-207ENST00000540550 PNMA5Q96PV4 448 aa16.68■□□□□ 0.26
TSFM-207ENST00000540550 PCDHA12Q9UN75 941 aa16.68■□□□□ 0.26
TSFM-207ENST00000540550 CYP3A7-CYP3A51PA0A087WV96 503 aa16.67■□□□□ 0.26
TSFM-207ENST00000540550 A0A1B0GTH6 734 aa16.67■□□□□ 0.26
TSFM-207ENST00000540550 PSMA7O14818 248 aa16.67■□□□□ 0.26
TSFM-207ENST00000540550 CYP3A7P24462 503 aa16.67■□□□□ 0.26
TSFM-207ENST00000540550 RASA3Q14644 834 aa16.67■□□□□ 0.26
TSFM-207ENST00000540550 KIAA1755Q5JYT7 1200 aa16.67■□□□□ 0.26
TSFM-207ENST00000540550 SPECC1LQ69YQ0 1117 aa16.67■□□□□ 0.26
TSFM-207ENST00000540550 FAM160B2Q86V87 743 aa16.67■□□□□ 0.26
TSFM-207ENST00000540550 ADSSL1Q8N142 457 aa16.67■□□□□ 0.26
TSFM-207ENST00000540550 GIMAP8Q8ND71 665 aaPredicted RBP16.67■□□□□ 0.26
TSFM-207ENST00000540550 LARP4BQ92615 738 aaKnown RBP16.67■□□□□ 0.26
TSFM-207ENST00000540550 LRRC27Q9C0I9 530 aa16.67■□□□□ 0.26
TSFM-207ENST00000540550 PGAP2Q9UHJ9 254 aa16.67■□□□□ 0.26
TSFM-207ENST00000540550 MAPK8IP1Q9UQF2 711 aa16.67■□□□□ 0.26
TSFM-207ENST00000540550 KDM3AQ9Y4C1 1321 aa16.67■□□□□ 0.26
TSFM-207ENST00000540550 PSDA5PKW4 1024 aaPredicted RBP16.66■□□□□ 0.26
TSFM-207ENST00000540550 TPM2P07951 284 aa16.66■□□□□ 0.26
TSFM-207ENST00000540550 MAP3K10Q02779 954 aa16.66■□□□□ 0.26
TSFM-207ENST00000540550 PDE4DQ08499 809 aa16.66■□□□□ 0.26
TSFM-207ENST00000540550 SLFN12Q8IYM2 578 aa16.66■□□□□ 0.26
TSFM-207ENST00000540550 RAD54LQ92698 747 aa16.66■□□□□ 0.26
TSFM-207ENST00000540550 KIFC2Q96AC6 838 aa16.66■□□□□ 0.26
TSFM-207ENST00000540550 FEZ1Q99689 392 aa16.66■□□□□ 0.26
TSFM-207ENST00000540550 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.66■□□□□ 0.26
TSFM-207ENST00000540550 GJA3Q9Y6H8 435 aa16.66■□□□□ 0.26
TSFM-207ENST00000540550 COBLO75128 1261 aa16.66■□□□□ 0.26
TSFM-207ENST00000540550 PPP1R2P41236 205 aa16.66■□□□□ 0.26
TSFM-207ENST00000540550 GMPSP49915 693 aaPredicted RBP16.66■□□□□ 0.26
TSFM-207ENST00000540550 RASSF7Q02833 373 aa16.66■□□□□ 0.26
TSFM-207ENST00000540550 NR1I3Q14994 352 aa16.66■□□□□ 0.26
TSFM-207ENST00000540550 TMEM119Q4V9L6 283 aa16.66■□□□□ 0.26
TSFM-207ENST00000540550 CCDC174Q6PII3 467 aa16.66■□□□□ 0.26
TSFM-207ENST00000540550 TEX2Q8IWB9 1127 aa16.66■□□□□ 0.26
TSFM-207ENST00000540550 MBOAT7Q96N66 472 aa16.66■□□□□ 0.26
TSFM-207ENST00000540550 FEM1BQ9UK73 627 aa16.66■□□□□ 0.26
TSFM-207ENST00000540550 H7C1D1 291 aa16.65■□□□□ 0.26
TSFM-207ENST00000540550 SLC26A4O43511 780 aa16.65■□□□□ 0.26
TSFM-207ENST00000540550 PLA2G6O60733 806 aa16.65■□□□□ 0.26
TSFM-207ENST00000540550 SREBF1P36956 1147 aa16.65■□□□□ 0.26
TSFM-207ENST00000540550 CCT6AP40227 531 aaKnown RBP16.65■□□□□ 0.26
TSFM-207ENST00000540550 PTGER2P43116 358 aa16.65■□□□□ 0.26
TSFM-207ENST00000540550 MCM6Q14566 821 aa16.65■□□□□ 0.26
TSFM-207ENST00000540550 PTPN21Q16825 1174 aa16.65■□□□□ 0.26
TSFM-207ENST00000540550 CNNM4Q6P4Q7 775 aa16.65■□□□□ 0.26
TSFM-207ENST00000540550 MICALL2Q8IY33 904 aa16.65■□□□□ 0.26
TSFM-207ENST00000540550 DHTKD1Q96HY7 919 aaPredicted RBP16.65■□□□□ 0.26
TSFM-207ENST00000540550 C16orf45Q96MC5 204 aaPredicted RBP16.65■□□□□ 0.26
TSFM-207ENST00000540550 RANBP17Q9H2T7 1088 aaKnown RBP16.65■□□□□ 0.26
TSFM-207ENST00000540550 KCNMB3Q9NPA1 279 aa16.65■□□□□ 0.26
TSFM-207ENST00000540550 BLOC1S4Q9NUP1 217 aa16.65■□□□□ 0.26
TSFM-207ENST00000540550 PIK3CDO00329 1044 aa16.64■□□□□ 0.26
TSFM-207ENST00000540550 TAL1P17542 331 aaPredicted RBP16.64■□□□□ 0.26
TSFM-207ENST00000540550 HOXA13P31271 388 aaPredicted RBP16.64■□□□□ 0.26
TSFM-207ENST00000540550 TBX2Q13207 712 aaPredicted RBP16.64■□□□□ 0.26
TSFM-207ENST00000540550 PRIMPOLQ96LW4 560 aa16.64■□□□□ 0.26
TSFM-207ENST00000540550 NT5C3AQ9H0P0 336 aa16.64■□□□□ 0.26
TSFM-207ENST00000540550 LIMA1Q9UHB6 759 aaKnown RBP16.64■□□□□ 0.26
TSFM-207ENST00000540550 KCNJ18B7U540 433 aa16.64■□□□□ 0.25
TSFM-207ENST00000540550 KCNJ6P48051 423 aa16.64■□□□□ 0.25
TSFM-207ENST00000540550 KCNJ12Q14500 433 aa16.64■□□□□ 0.25
TSFM-207ENST00000540550 Q4G0T1 1027 aa16.64■□□□□ 0.25
TSFM-207ENST00000540550 PRR16Q569H4 304 aa16.64■□□□□ 0.25
TSFM-207ENST00000540550 SAMD1Q6SPF0 538 aaPredicted RBP16.64■□□□□ 0.25
TSFM-207ENST00000540550 APTXQ7Z2E3 356 aaKnown RBP16.64■□□□□ 0.25
TSFM-207ENST00000540550 CCAR2Q8N163 923 aaKnown RBP16.64■□□□□ 0.25
TSFM-207ENST00000540550 CRYGNQ8WXF5 182 aa16.64■□□□□ 0.25
TSFM-207ENST00000540550 GJA10Q969M2 543 aa16.64■□□□□ 0.25
TSFM-207ENST00000540550 TRIM47Q96LD4 638 aa16.64■□□□□ 0.25
TSFM-207ENST00000540550 ZNF341Q9BYN7 854 aa16.64■□□□□ 0.25
TSFM-207ENST00000540550 ADD3Q9UEY8 706 aaKnown RBP16.64■□□□□ 0.25
TSFM-207ENST00000540550 SCAF8Q9UPN6 1271 aaKnown RBP16.64■□□□□ 0.25
TSFM-207ENST00000540550 SMCHD1A6NHR9 2005 aa16.64■□□□□ 0.25
TSFM-207ENST00000540550 BICDL2A1A5D9 508 aa16.63■□□□□ 0.25
TSFM-207ENST00000540550 OPLAHO14841 1288 aa16.63■□□□□ 0.25
TSFM-207ENST00000540550 TBX3O15119 743 aa16.63■□□□□ 0.25
TSFM-207ENST00000540550 ZNF76P36508 570 aa16.63■□□□□ 0.25
TSFM-207ENST00000540550 KRT31Q15323 416 aa16.63■□□□□ 0.25
TSFM-207ENST00000540550 TBC1D10BQ4KMP7 808 aaPredicted RBP16.63■□□□□ 0.25
TSFM-207ENST00000540550 NOC3LQ8WTT2 800 aaKnown RBP16.63■□□□□ 0.25
TSFM-207ENST00000540550 P2RX7Q99572 595 aaKnown RBP16.63■□□□□ 0.25
TSFM-207ENST00000540550 NUDT12Q9BQG2 462 aa16.63■□□□□ 0.25
TSFM-207ENST00000540550 EHMT1Q9H9B1 1298 aa16.63■□□□□ 0.25
TSFM-207ENST00000540550 KCND1Q9NSA2 647 aa16.63■□□□□ 0.25
TSFM-207ENST00000540550 GINM1Q9NU53 330 aa16.63■□□□□ 0.25
TSFM-207ENST00000540550 CNOT7Q9UIV1 285 aaKnown RBP16.63■□□□□ 0.25
TSFM-207ENST00000540550 MRPL11Q9Y3B7 192 aaKnown RBP16.63■□□□□ 0.25
TSFM-207ENST00000540550 PVALEFA0A1B0GWK0 134 aa16.62■□□□□ 0.25
TSFM-207ENST00000540550 MYMKA6NI61 221 aa16.62■□□□□ 0.25
TSFM-207ENST00000540550 PHF20L1A8MW92 1017 aa16.62■□□□□ 0.25
TSFM-207ENST00000540550 GCOM1H8Y6P7 765 aaPredicted RBP16.62■□□□□ 0.25
TSFM-207ENST00000540550 EGFRP00533 1210 aa16.62■□□□□ 0.25
TSFM-207ENST00000540550 POLR2MP0CAP2 368 aa16.62■□□□□ 0.25
TSFM-207ENST00000540550 TCP11X2Q5H9J9 407 aa16.62■□□□□ 0.25
TSFM-207ENST00000540550 UNC13DQ70J99 1090 aa16.62■□□□□ 0.25
TSFM-207ENST00000540550 SAMD7Q7Z3H4 446 aa16.62■□□□□ 0.25
TSFM-207ENST00000540550 PPFIBP1Q86W92 1011 aa16.62■□□□□ 0.25
TSFM-207ENST00000540550 FCHSD1Q86WN1 690 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms