RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 STOX1Q6ZVD7 989 aa15.28■□□□□ 0.04
SEMA4D-223ENST00000540475 NCOA7Q8NI08 942 aa15.28■□□□□ 0.04
SEMA4D-223ENST00000540475 NSUN6Q8TEA1 469 aaKnown RBP15.28■□□□□ 0.04
SEMA4D-223ENST00000540475 TAAR1Q96RJ0 339 aa15.28■□□□□ 0.04
SEMA4D-223ENST00000540475 MTA3Q9BTC8 594 aa15.28■□□□□ 0.04
SEMA4D-223ENST00000540475 AMNQ9BXJ7 453 aa15.28■□□□□ 0.04
SEMA4D-223ENST00000540475 TMEM265A0A087WTH1 108 aa15.27■□□□□ 0.04
SEMA4D-223ENST00000540475 ZBTB5O15062 677 aa15.27■□□□□ 0.04
SEMA4D-223ENST00000540475 PPP1R11O60927 126 aaPredicted RBP15.27■□□□□ 0.04
SEMA4D-223ENST00000540475 PPIGQ13427 754 aaKnown RBP eCLIP15.27■□□□□ 0.04
SEMA4D-223ENST00000540475 PPP2R5BQ15173 497 aa15.27■□□□□ 0.04
SEMA4D-223ENST00000540475 TMEM240Q5SV17 173 aa15.27■□□□□ 0.04
SEMA4D-223ENST00000540475 MB21D2Q8IYB1 491 aaPredicted RBP15.27■□□□□ 0.04
SEMA4D-223ENST00000540475 TMEM199Q8N511 208 aa15.27■□□□□ 0.04
SEMA4D-223ENST00000540475 IGDCC4Q8TDY8 1250 aa15.27■□□□□ 0.04
SEMA4D-223ENST00000540475 RNPC3Q96LT9 517 aaKnown RBP15.27■□□□□ 0.04
SEMA4D-223ENST00000540475 MAP3K14Q99558 947 aa15.27■□□□□ 0.04
SEMA4D-223ENST00000540475 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.27■□□□□ 0.04
SEMA4D-223ENST00000540475 SEMA6BQ9H3T3 888 aa15.27■□□□□ 0.04
SEMA4D-223ENST00000540475 VAT1LQ9HCJ6 419 aa15.27■□□□□ 0.04
SEMA4D-223ENST00000540475 CYTH3O43739 400 aa15.26■□□□□ 0.03
SEMA4D-223ENST00000540475 B4GALT4O60513 344 aa15.26■□□□□ 0.03
SEMA4D-223ENST00000540475 ARIH2O95376 493 aa15.26■□□□□ 0.03
SEMA4D-223ENST00000540475 ANTXR2P58335 489 aa15.26■□□□□ 0.03
SEMA4D-223ENST00000540475 TTLL4Q14679 1199 aa15.26■□□□□ 0.03
SEMA4D-223ENST00000540475 OR6J1Q8NGC5 347 aa15.26■□□□□ 0.03
SEMA4D-223ENST00000540475 RMDN3Q96TC7 470 aa15.26■□□□□ 0.03
SEMA4D-223ENST00000540475 MTG1Q9BT17 334 aaPredicted RBP15.26■□□□□ 0.03
SEMA4D-223ENST00000540475 ALDH8A1Q9H2A2 487 aaPredicted RBP15.26■□□□□ 0.03
SEMA4D-223ENST00000540475 SENP2Q9HC62 589 aa15.26■□□□□ 0.03
SEMA4D-223ENST00000540475 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.25■□□□□ 0.03
SEMA4D-223ENST00000540475 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.25■□□□□ 0.03
SEMA4D-223ENST00000540475 IFIT3O14879 490 aaKnown RBP15.25■□□□□ 0.03
SEMA4D-223ENST00000540475 EIF3JO75822 258 aaKnown RBP15.25■□□□□ 0.03
SEMA4D-223ENST00000540475 TXNP10599 105 aaKnown RBP15.25■□□□□ 0.03
SEMA4D-223ENST00000540475 CSF2RAP15509 400 aa15.25■□□□□ 0.03
SEMA4D-223ENST00000540475 PSMC6P62333 389 aa15.25■□□□□ 0.03
SEMA4D-223ENST00000540475 PTPN11Q06124 597 aaPredicted RBP15.25■□□□□ 0.03
SEMA4D-223ENST00000540475 TRAF1Q13077 416 aa15.25■□□□□ 0.03
SEMA4D-223ENST00000540475 STXBP2Q15833 593 aa15.25■□□□□ 0.03
SEMA4D-223ENST00000540475 ZNF697Q5TEC3 545 aa15.25■□□□□ 0.03
SEMA4D-223ENST00000540475 NFRKBQ6P4R8 1299 aa15.25■□□□□ 0.03
SEMA4D-223ENST00000540475 EMID1Q96A84 441 aaPredicted RBP15.25■□□□□ 0.03
SEMA4D-223ENST00000540475 VWCEQ96DN2 955 aa15.25■□□□□ 0.03
SEMA4D-223ENST00000540475 NOC4LQ9BVI4 516 aaKnown RBP15.25■□□□□ 0.03
SEMA4D-223ENST00000540475 LSG1Q9H089 658 aaKnown RBP15.25■□□□□ 0.03
SEMA4D-223ENST00000540475 TRPV6Q9H1D0 765 aa15.25■□□□□ 0.03
SEMA4D-223ENST00000540475 TTYH1Q9H313 450 aaPredicted RBP15.25■□□□□ 0.03
SEMA4D-223ENST00000540475 IL23AQ9NPF7 189 aa15.25■□□□□ 0.03
SEMA4D-223ENST00000540475 PXMP2Q9NR77 195 aa15.25■□□□□ 0.03
SEMA4D-223ENST00000540475 RBM8AQ9Y5S9 174 aaKnown RBP15.25■□□□□ 0.03
SEMA4D-223ENST00000540475 GBF1Q92538 1859 aa15.25■□□□□ 0.03
SEMA4D-223ENST00000540475 TRIP12Q14669 1992 aaPredicted RBP15.24■□□□□ 0.03
SEMA4D-223ENST00000540475 ERICH2A1L162 156 aa15.24■□□□□ 0.03
SEMA4D-223ENST00000540475 SMARCA1P28370 1054 aa15.24■□□□□ 0.03
SEMA4D-223ENST00000540475 CYP2C18P33260 490 aa15.24■□□□□ 0.03
SEMA4D-223ENST00000540475 ARHGAP1Q07960 439 aa15.24■□□□□ 0.03
SEMA4D-223ENST00000540475 WTAPQ15007 396 aa15.24■□□□□ 0.03
SEMA4D-223ENST00000540475 SART3Q15020 963 aaKnown RBP15.24■□□□□ 0.03
SEMA4D-223ENST00000540475 BRDTQ58F21 947 aaPredicted RBP15.24■□□□□ 0.03
SEMA4D-223ENST00000540475 PSRC1Q6PGN9 363 aaPredicted RBP15.24■□□□□ 0.03
SEMA4D-223ENST00000540475 RALYLQ86SE5 291 aaKnown RBP15.24■□□□□ 0.03
SEMA4D-223ENST00000540475 HERVK_113Q902F9 699 aa15.24■□□□□ 0.03
SEMA4D-223ENST00000540475 COPS5Q92905 334 aa15.24■□□□□ 0.03
SEMA4D-223ENST00000540475 HIPK3Q9H422 1215 aa15.24■□□□□ 0.03
SEMA4D-223ENST00000540475 DDX41Q9UJV9 622 aaKnown RBP15.24■□□□□ 0.03
SEMA4D-223ENST00000540475 PCDHA1Q9Y5I3 950 aa15.24■□□□□ 0.03
SEMA4D-223ENST00000540475 SCN5AQ14524 2016 aa15.24■□□□□ 0.03
SEMA4D-223ENST00000540475 CHD7Q9P2D1 2997 aa15.24■□□□□ 0.03
SEMA4D-223ENST00000540475 TANC1Q9C0D5 1861 aa15.23■□□□□ 0.03
SEMA4D-223ENST00000540475 PNMA6FA0A0J9YX94 578 aa15.23■□□□□ 0.03
SEMA4D-223ENST00000540475 DHX16O60231 1041 aaKnown RBP15.23■□□□□ 0.03
SEMA4D-223ENST00000540475 NR3C2P08235 984 aa15.23■□□□□ 0.03
SEMA4D-223ENST00000540475 SUPT20HL2P0C7V6 817 aa15.23■□□□□ 0.03
SEMA4D-223ENST00000540475 NECTIN1Q15223 517 aa15.23■□□□□ 0.03
SEMA4D-223ENST00000540475 ZNF365Q70YC5 407 aa15.23■□□□□ 0.03
SEMA4D-223ENST00000540475 SESTD1Q86VW0 696 aa15.23■□□□□ 0.03
SEMA4D-223ENST00000540475 ESYT1Q9BSJ8 1104 aa15.23■□□□□ 0.03
SEMA4D-223ENST00000540475 PPP1R12CQ9BZL4 782 aa15.23■□□□□ 0.03
SEMA4D-223ENST00000540475 WNT8AQ9H1J5 351 aa15.23■□□□□ 0.03
SEMA4D-223ENST00000540475 UMODL1Q5DID0 1318 aa15.22■□□□□ 0.03
SEMA4D-223ENST00000540475 CFBP00751 764 aa15.22■□□□□ 0.03
SEMA4D-223ENST00000540475 GH1P01241 217 aa15.22■□□□□ 0.03
SEMA4D-223ENST00000540475 MYL3P08590 195 aa15.22■□□□□ 0.03
SEMA4D-223ENST00000540475 LY6KQ17RY6 165 aa15.22■□□□□ 0.03
SEMA4D-223ENST00000540475 NBPF20Q3BBV1 942 aa15.22■□□□□ 0.03
SEMA4D-223ENST00000540475 TMEM67Q5HYA8 995 aa15.22■□□□□ 0.03
SEMA4D-223ENST00000540475 ARHGEF16Q5VV41 709 aa15.22■□□□□ 0.03
SEMA4D-223ENST00000540475 CHST3Q7LGC8 479 aa15.22■□□□□ 0.03
SEMA4D-223ENST00000540475 CATIPQ7Z7H3 387 aa15.22■□□□□ 0.03
SEMA4D-223ENST00000540475 VSIG10LQ86VR7 867 aa15.22■□□□□ 0.03
SEMA4D-223ENST00000540475 SLC17A8Q8NDX2 589 aa15.22■□□□□ 0.03
SEMA4D-223ENST00000540475 PIGSQ96S52 555 aa15.22■□□□□ 0.03
SEMA4D-223ENST00000540475 CDX2Q99626 313 aaPredicted RBP15.22■□□□□ 0.03
SEMA4D-223ENST00000540475 PDCD2LQ9BRP1 358 aa15.22■□□□□ 0.03
SEMA4D-223ENST00000540475 LY9Q9HBG7 655 aa15.22■□□□□ 0.03
SEMA4D-223ENST00000540475 GPHNQ9NQX3 736 aaPredicted RBP15.22■□□□□ 0.03
SEMA4D-223ENST00000540475 VCANP13611 3396 aa15.22■□□□□ 0.03
SEMA4D-223ENST00000540475 RGS20O76081 388 aa15.21■□□□□ 0.03
SEMA4D-223ENST00000540475 MMP3P08254 477 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms