RNA–Protein interactions for RNA: ENST00000540128.1

TRIM65-202, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-202ENST00000540128 VTA1Q9NP79 307 aa25.42■■□□□ 1.66
TRIM65-202ENST00000540128 LIMCH1Q9UPQ0 1083 aa25.42■■□□□ 1.66
TRIM65-202ENST00000540128 DDX49Q9Y6V7 483 aaKnown RBP25.42■■□□□ 1.66
TRIM65-202ENST00000540128 TFRCP02786 760 aaKnown RBP25.41■■□□□ 1.66
TRIM65-202ENST00000540128 AKR1A1P14550 325 aa25.41■■□□□ 1.66
TRIM65-202ENST00000540128 AKAP17AQ02040 695 aaKnown RBP25.41■■□□□ 1.66
TRIM65-202ENST00000540128 TRIM22Q8IYM9 498 aa25.41■■□□□ 1.66
TRIM65-202ENST00000540128 CUL5Q93034 780 aa25.41■■□□□ 1.66
TRIM65-202ENST00000540128 PXMP2Q9NR77 195 aa25.41■■□□□ 1.66
TRIM65-202ENST00000540128 ZHX1Q9UKY1 873 aaPredicted RBP25.41■■□□□ 1.66
TRIM65-202ENST00000540128 FAM184BQ9ULE4 1060 aa25.41■■□□□ 1.66
TRIM65-202ENST00000540128 CDKL5O76039 1030 aa25.4■■□□□ 1.66
TRIM65-202ENST00000540128 SSRP1Q08945 709 aaKnown RBP25.4■■□□□ 1.66
TRIM65-202ENST00000540128 ARHGEF16Q5VV41 709 aa25.4■■□□□ 1.66
TRIM65-202ENST00000540128 TAPT1Q6NXT6 567 aa25.4■■□□□ 1.66
TRIM65-202ENST00000540128 USP17L6PQ6QN14 398 aa25.4■■□□□ 1.66
TRIM65-202ENST00000540128 GTF3C6Q969F1 213 aa25.4■■□□□ 1.66
TRIM65-202ENST00000540128 GLT8D2Q9H1C3 349 aa25.4■■□□□ 1.66
TRIM65-202ENST00000540128 RBM47A0AV96 593 aaKnown RBP25.39■■□□□ 1.66
TRIM65-202ENST00000540128 ESYT2A0FGR8 921 aa25.39■■□□□ 1.66
TRIM65-202ENST00000540128 LARGE1O95461 756 aa25.39■■□□□ 1.66
TRIM65-202ENST00000540128 NR3C2P08235 984 aa25.39■■□□□ 1.66
TRIM65-202ENST00000540128 NAPAP54920 295 aa25.39■■□□□ 1.66
TRIM65-202ENST00000540128 PDE4DQ08499 809 aa25.39■■□□□ 1.66
TRIM65-202ENST00000540128 CCDC144BQ3MJ40 725 aa25.39■■□□□ 1.66
TRIM65-202ENST00000540128 FCHSD1Q86WN1 690 aa25.39■■□□□ 1.66
TRIM65-202ENST00000540128 ANKLE1Q8NAG6 615 aa25.39■■□□□ 1.66
TRIM65-202ENST00000540128 PDCD2LQ9BRP1 358 aa25.39■■□□□ 1.66
TRIM65-202ENST00000540128 RIC8AQ9NPQ8 531 aa25.39■■□□□ 1.66
TRIM65-202ENST00000540128 FRMPD4Q14CM0 1322 aa25.38■■□□□ 1.65
TRIM65-202ENST00000540128 DEXIO95424 95 aa25.38■■□□□ 1.65
TRIM65-202ENST00000540128 CTDNEP1O95476 244 aa25.38■■□□□ 1.65
TRIM65-202ENST00000540128 IQSEC1Q6DN90 963 aa25.38■■□□□ 1.65
TRIM65-202ENST00000540128 NOL8Q76FK4 1167 aaKnown RBP25.38■■□□□ 1.65
TRIM65-202ENST00000540128 UBE2Q1Q7Z7E8 422 aa25.38■■□□□ 1.65
TRIM65-202ENST00000540128 VSIG10LQ86VR7 867 aa25.38■■□□□ 1.65
TRIM65-202ENST00000540128 NECAB1Q8N987 351 aa25.38■■□□□ 1.65
TRIM65-202ENST00000540128 SMARCC2Q8TAQ2 1214 aa25.38■■□□□ 1.65
TRIM65-202ENST00000540128 ZSCAN31Q96LW9 406 aaPredicted RBP25.38■■□□□ 1.65
TRIM65-202ENST00000540128 SH3GLB2Q9NR46 395 aa25.38■■□□□ 1.65
TRIM65-202ENST00000540128 SMCO2A6NFE2 343 aa25.37■■□□□ 1.65
TRIM65-202ENST00000540128 PPFIA3O75145 1194 aa25.37■■□□□ 1.65
TRIM65-202ENST00000540128 RARBP10826 455 aa25.37■■□□□ 1.65
TRIM65-202ENST00000540128 EIF2AK2P19525 551 aaKnown RBP25.37■■□□□ 1.65
TRIM65-202ENST00000540128 MNX1P50219 401 aaPredicted RBP25.37■■□□□ 1.65
TRIM65-202ENST00000540128 STXBP2Q15833 593 aa25.37■■□□□ 1.65
TRIM65-202ENST00000540128 FBXO16Q8IX29 292 aaPredicted RBP25.37■■□□□ 1.65
TRIM65-202ENST00000540128 FAM177A1Q8N128 213 aaPredicted RBP25.37■■□□□ 1.65
TRIM65-202ENST00000540128 CCDC12Q8WUD4 166 aaPredicted RBP25.37■■□□□ 1.65
TRIM65-202ENST00000540128 ZMYND12Q9H0C1 365 aa25.37■■□□□ 1.65
TRIM65-202ENST00000540128 PDGFCQ9NRA1 345 aa25.37■■□□□ 1.65
TRIM65-202ENST00000540128 STK36Q9NRP7 1315 aa25.37■■□□□ 1.65
TRIM65-202ENST00000540128 DUSP11O75319 330 aaKnown RBP25.36■■□□□ 1.65
TRIM65-202ENST00000540128 EIF3JO75822 258 aaKnown RBP25.36■■□□□ 1.65
TRIM65-202ENST00000540128 ADCY7P51828 1080 aa25.36■■□□□ 1.65
TRIM65-202ENST00000540128 PGM5Q15124 567 aa25.36■■□□□ 1.65
TRIM65-202ENST00000540128 EEPD1Q7L9B9 569 aa25.36■■□□□ 1.65
TRIM65-202ENST00000540128 ST18O60284 1047 aa25.35■■□□□ 1.65
TRIM65-202ENST00000540128 NKX3-2P78367 333 aa25.35■■□□□ 1.65
TRIM65-202ENST00000540128 ST3GAL1Q11201 340 aa25.35■■□□□ 1.65
TRIM65-202ENST00000540128 SH2B1Q9NRF2 756 aaPredicted RBP25.35■■□□□ 1.65
TRIM65-202ENST00000540128 GNEQ9Y223 722 aaKnown RBP25.35■■□□□ 1.65
TRIM65-202ENST00000540128 ADCY6O43306 1168 aa25.34■■□□□ 1.65
TRIM65-202ENST00000540128 ADCYAP1R1P41586 468 aa25.34■■□□□ 1.65
TRIM65-202ENST00000540128 TNFAIP2Q03169 654 aa25.34■■□□□ 1.65
TRIM65-202ENST00000540128 ANO1Q5XXA6 986 aa25.34■■□□□ 1.65
TRIM65-202ENST00000540128 XRRA1Q6P2D8 792 aa25.34■■□□□ 1.65
TRIM65-202ENST00000540128 ARRDC4Q8NCT1 418 aa25.34■■□□□ 1.65
TRIM65-202ENST00000540128 Q9Y3F1 56 aa25.34■■□□□ 1.65
TRIM65-202ENST00000540128 FOSP01100 380 aaPredicted RBP25.33■■□□□ 1.65
TRIM65-202ENST00000540128 SMPD1P17405 629 aa25.33■■□□□ 1.65
TRIM65-202ENST00000540128 CLK2P49760 499 aaKnown RBP25.33■■□□□ 1.65
TRIM65-202ENST00000540128 UBE2SQ16763 222 aa25.33■■□□□ 1.65
TRIM65-202ENST00000540128 CCDC148Q8NFR7 591 aa25.33■■□□□ 1.65
TRIM65-202ENST00000540128 IL31RAQ8NI17 732 aa25.33■■□□□ 1.65
TRIM65-202ENST00000540128 SCFD2Q8WU76 684 aa25.33■■□□□ 1.65
TRIM65-202ENST00000540128 UPF3AQ9H1J1 476 aaKnown RBP25.33■■□□□ 1.65
TRIM65-202ENST00000540128 C6orf50Q9HD87 102 aa25.33■■□□□ 1.65
TRIM65-202ENST00000540128 XPNPEP3Q9NQH7 507 aa25.33■■□□□ 1.65
TRIM65-202ENST00000540128 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.32■■□□□ 1.64
TRIM65-202ENST00000540128 FARP2O94887 1054 aaPredicted RBP25.32■■□□□ 1.64
TRIM65-202ENST00000540128 GNA11P29992 359 aa25.32■■□□□ 1.64
TRIM65-202ENST00000540128 CCND2P30279 289 aa25.32■■□□□ 1.64
TRIM65-202ENST00000540128 DUSP28Q4G0W2 176 aa25.32■■□□□ 1.64
TRIM65-202ENST00000540128 NSUN7Q8NE18 718 aaKnown RBP25.32■■□□□ 1.64
TRIM65-202ENST00000540128 WDR11Q9BZH6 1224 aa25.32■■□□□ 1.64
TRIM65-202ENST00000540128 PCDHA6Q9UN73 950 aa25.32■■□□□ 1.64
TRIM65-202ENST00000540128 PCDHA8Q9Y5H6 950 aa25.32■■□□□ 1.64
TRIM65-202ENST00000540128 LRRC37A2A6NM11 1700 aa25.32■■□□□ 1.64
TRIM65-202ENST00000540128 SPDYE3A6NKU9 549 aa25.31■■□□□ 1.64
TRIM65-202ENST00000540128 ADAMTS4O75173 837 aa25.31■■□□□ 1.64
TRIM65-202ENST00000540128 STAM2O75886 525 aa25.31■■□□□ 1.64
TRIM65-202ENST00000540128 RGS20O76081 388 aa25.31■■□□□ 1.64
TRIM65-202ENST00000540128 FDPSP14324 419 aaKnown RBP25.31■■□□□ 1.64
TRIM65-202ENST00000540128 MCM2P49736 904 aa25.31■■□□□ 1.64
TRIM65-202ENST00000540128 GJA9P57773 515 aa25.31■■□□□ 1.64
TRIM65-202ENST00000540128 AP3B2Q13367 1082 aa25.31■■□□□ 1.64
TRIM65-202ENST00000540128 LRRC41Q15345 812 aa25.31■■□□□ 1.64
TRIM65-202ENST00000540128 PCNX4Q63HM2 1172 aa25.31■■□□□ 1.64
TRIM65-202ENST00000540128 MCTP2Q6DN12 878 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms