RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 STAP2Q9UGK3 403 aa5.19□□□□□ -1.58
C2CD3-214ENST00000540057 ANGEL1Q9UNK9 670 aaKnown RBP5.19□□□□□ -1.58
C2CD3-214ENST00000540057 FZD1Q9UP38 647 aa5.19□□□□□ -1.58
C2CD3-214ENST00000540057 LEMD3Q9Y2U8 911 aa5.19□□□□□ -1.58
C2CD3-214ENST00000540057 RRP7AQ9Y3A4 280 aaKnown RBP5.19□□□□□ -1.58
C2CD3-214ENST00000540057 NR2E3Q9Y5X4 410 aa5.19□□□□□ -1.58
C2CD3-214ENST00000540057 COL4A1P02462 1669 aa5.18□□□□□ -1.58
C2CD3-214ENST00000540057 NEFLP07196 543 aa5.18□□□□□ -1.58
C2CD3-214ENST00000540057 NFICP08651 508 aa5.18□□□□□ -1.58
C2CD3-214ENST00000540057 ZBTB48P10074 688 aaPredicted RBP5.18□□□□□ -1.58
C2CD3-214ENST00000540057 MYL6BP14649 208 aa5.18□□□□□ -1.58
C2CD3-214ENST00000540057 RAB6AP20340 208 aa5.18□□□□□ -1.58
C2CD3-214ENST00000540057 FAAP100Q0VG06 881 aa5.18□□□□□ -1.58
C2CD3-214ENST00000540057 MCM10Q7L590 875 aa5.18□□□□□ -1.58
C2CD3-214ENST00000540057 ABI1Q8IZP0 508 aa5.18□□□□□ -1.58
C2CD3-214ENST00000540057 GIMAP7Q8NHV1 300 aa5.18□□□□□ -1.58
C2CD3-214ENST00000540057 TBC1D16Q8TBP0 767 aa5.18□□□□□ -1.58
C2CD3-214ENST00000540057 CELF1Q92879 486 aaKnown RBP5.18□□□□□ -1.58
C2CD3-214ENST00000540057 CCDC74AQ96AQ1 378 aa5.18□□□□□ -1.58
C2CD3-214ENST00000540057 WNK4Q96J92 1243 aa5.18□□□□□ -1.58
C2CD3-214ENST00000540057 CLMNQ96JQ2 1002 aa5.18□□□□□ -1.58
C2CD3-214ENST00000540057 PHACTR3Q96KR7 559 aa5.18□□□□□ -1.58
C2CD3-214ENST00000540057 TBC1D32Q96NH3 1257 aa5.18□□□□□ -1.58
C2CD3-214ENST00000540057 METTL22Q9BUU2 404 aaPredicted RBP5.18□□□□□ -1.58
C2CD3-214ENST00000540057 ZC3H12CQ9C0D7 883 aaKnown RBP5.18□□□□□ -1.58
C2CD3-214ENST00000540057 RAPGEFL1Q9UHV5 662 aa5.18□□□□□ -1.58
C2CD3-214ENST00000540057 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.17□□□□□ -1.58
C2CD3-214ENST00000540057 TMEM238LA0A1B0GVL6 79 aa5.17□□□□□ -1.58
C2CD3-214ENST00000540057 WNT10BO00744 389 aa5.17□□□□□ -1.58
C2CD3-214ENST00000540057 DYNC1LI2O43237 492 aaPredicted RBP5.17□□□□□ -1.58
C2CD3-214ENST00000540057 PAX4O43316 350 aa5.17□□□□□ -1.58
C2CD3-214ENST00000540057 BMP8BP34820 402 aa5.17□□□□□ -1.58
C2CD3-214ENST00000540057 GJA8P48165 433 aa5.17□□□□□ -1.58
C2CD3-214ENST00000540057 GRM2Q14416 872 aa5.17□□□□□ -1.58
C2CD3-214ENST00000540057 ARHGEF6Q15052 776 aa5.17□□□□□ -1.58
C2CD3-214ENST00000540057 MAP3K11Q16584 847 aa5.17□□□□□ -1.58
C2CD3-214ENST00000540057 HP1BP3Q5SSJ5 553 aaPredicted RBP5.17□□□□□ -1.58
C2CD3-214ENST00000540057 OTUD7BQ6GQQ9 843 aa5.17□□□□□ -1.58
C2CD3-214ENST00000540057 DYMQ7RTS9 669 aa5.17□□□□□ -1.58
C2CD3-214ENST00000540057 ALKBH8Q96BT7 664 aaKnown RBP5.17□□□□□ -1.58
C2CD3-214ENST00000540057 CORO1BQ9BR76 489 aa5.17□□□□□ -1.58
C2CD3-214ENST00000540057 YIPF2Q9BWQ6 316 aa5.17□□□□□ -1.58
C2CD3-214ENST00000540057 KRTAP9-9Q9BYP9 154 aa5.17□□□□□ -1.58
C2CD3-214ENST00000540057 KRTAP9-4Q9BYQ2 154 aa5.17□□□□□ -1.58
C2CD3-214ENST00000540057 NIF3L1Q9GZT8 377 aa5.17□□□□□ -1.58
C2CD3-214ENST00000540057 DNAJC25Q9H1X3 360 aa5.17□□□□□ -1.58
C2CD3-214ENST00000540057 CCDC39Q9UFE4 941 aa5.17□□□□□ -1.58
C2CD3-214ENST00000540057 PPP1R9AQ9ULJ8 1098 aa5.17□□□□□ -1.58
C2CD3-214ENST00000540057 AP4E1Q9UPM8 1137 aa5.17□□□□□ -1.58
C2CD3-214ENST00000540057 VCANP13611 3396 aa5.17□□□□□ -1.58
C2CD3-214ENST00000540057 ALPK3Q96L96 1907 aa5.17□□□□□ -1.58
C2CD3-214ENST00000540057 COL3A1P02461 1466 aaPredicted RBP5.16□□□□□ -1.58
C2CD3-214ENST00000540057 U2SURPO15042 1029 aaKnown RBP5.16□□□□□ -1.58
C2CD3-214ENST00000540057 GJB1P08034 283 aa5.16□□□□□ -1.58
C2CD3-214ENST00000540057 PLA2G5P39877 138 aa5.16□□□□□ -1.58
C2CD3-214ENST00000540057 AP3B2Q13367 1082 aa5.16□□□□□ -1.58
C2CD3-214ENST00000540057 DCTN1Q14203 1278 aa5.16□□□□□ -1.58
C2CD3-214ENST00000540057 MAP7Q14244 749 aa5.16□□□□□ -1.58
C2CD3-214ENST00000540057 COL19A1Q14993 1142 aa5.16□□□□□ -1.58
C2CD3-214ENST00000540057 LRIT3Q3SXY7 679 aa5.16□□□□□ -1.58
C2CD3-214ENST00000540057 RPS26P11Q5JNZ5 115 aaPredicted RBP5.16□□□□□ -1.58
C2CD3-214ENST00000540057 CBLL1Q75N03 491 aa5.16□□□□□ -1.58
C2CD3-214ENST00000540057 ZNF765Q7L2R6 523 aa5.16□□□□□ -1.58
C2CD3-214ENST00000540057 LRP10Q7Z4F1 713 aa5.16□□□□□ -1.58
C2CD3-214ENST00000540057 VSIG10LQ86VR7 867 aa5.16□□□□□ -1.58
C2CD3-214ENST00000540057 NLRP10Q86W26 655 aa5.16□□□□□ -1.58
C2CD3-214ENST00000540057 EPS8L3Q8TE67 593 aaKnown RBP5.16□□□□□ -1.58
C2CD3-214ENST00000540057 GDF15Q99988 308 aa5.16□□□□□ -1.58
C2CD3-214ENST00000540057 RBCK1Q9BYM8 510 aa5.16□□□□□ -1.58
C2CD3-214ENST00000540057 ARHGAP39Q9C0H5 1083 aa5.16□□□□□ -1.58
C2CD3-214ENST00000540057 CCDC86Q9H6F5 360 aaKnown RBP5.16□□□□□ -1.58
C2CD3-214ENST00000540057 C1GALT1Q9NS00 363 aa5.16□□□□□ -1.58
C2CD3-214ENST00000540057 MIS18AQ9NYP9 233 aa5.16□□□□□ -1.58
C2CD3-214ENST00000540057 PODXL2Q9NZ53 605 aa5.16□□□□□ -1.58
C2CD3-214ENST00000540057 RPTORQ8N122 1335 aa5.16□□□□□ -1.58
C2CD3-214ENST00000540057 SH3TC1Q8TE82 1336 aa5.16□□□□□ -1.58
C2CD3-214ENST00000540057 SYNGAP1Q96PV0 1343 aa5.16□□□□□ -1.58
C2CD3-214ENST00000540057 SSC5DA1L4H1 1573 aa5.16□□□□□ -1.58
C2CD3-214ENST00000540057 EYSQ5T1H1 3165 aa5.15□□□□□ -1.58
C2CD3-214ENST00000540057 TMPRSS2O15393 492 aa5.15□□□□□ -1.59
C2CD3-214ENST00000540057 CYP26A1O43174 497 aa5.15□□□□□ -1.59
C2CD3-214ENST00000540057 UFL1O94874 794 aa5.15□□□□□ -1.59
C2CD3-214ENST00000540057 SASH1O94885 1247 aa5.15□□□□□ -1.59
C2CD3-214ENST00000540057 FARP2O94887 1054 aaPredicted RBP5.15□□□□□ -1.59
C2CD3-214ENST00000540057 PRKAR2BP31323 418 aa5.15□□□□□ -1.59
C2CD3-214ENST00000540057 TAF7Q15545 349 aaPredicted RBP5.15□□□□□ -1.59
C2CD3-214ENST00000540057 TAF1CQ15572 869 aaPredicted RBP5.15□□□□□ -1.59
C2CD3-214ENST00000540057 PI16Q6UXB8 463 aa5.15□□□□□ -1.59
C2CD3-214ENST00000540057 WFDC3Q8IUB2 231 aa5.15□□□□□ -1.59
C2CD3-214ENST00000540057 APOBEC3FQ8IUX4 373 aaKnown RBP5.15□□□□□ -1.59
C2CD3-214ENST00000540057 RTF1Q92541 710 aaKnown RBP5.15□□□□□ -1.59
C2CD3-214ENST00000540057 WDR89Q96FK6 387 aaPredicted RBP5.15□□□□□ -1.59
C2CD3-214ENST00000540057 GUCD1Q96NT3 240 aa5.15□□□□□ -1.59
C2CD3-214ENST00000540057 THUMPD2Q9BTF0 503 aaKnown RBP5.15□□□□□ -1.59
C2CD3-214ENST00000540057 MXD3Q9BW11 206 aa5.15□□□□□ -1.59
C2CD3-214ENST00000540057 ZC3H7BQ9UGR2 993 aaKnown RBP5.15□□□□□ -1.59
C2CD3-214ENST00000540057 TRMT112Q9UI30 125 aaKnown RBP5.15□□□□□ -1.59
C2CD3-214ENST00000540057 KNSTRNQ9Y448 316 aa5.15□□□□□ -1.59
C2CD3-214ENST00000540057 PCDHGC5Q9Y5F6 944 aa5.15□□□□□ -1.59
C2CD3-214ENST00000540057 SPTBN5Q9NRC6 3674 aaKnown RBP5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms