RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 ANKRD13CQ8N6S4 541 aa11.08□□□□□ -0.64
TRAF1-202ENST00000540010 SCLT1Q96NL6 688 aa11.08□□□□□ -0.64
TRAF1-202ENST00000540010 VEZTQ9HBM0 779 aa11.08□□□□□ -0.64
TRAF1-202ENST00000540010 TBC1D7Q9P0N9 293 aa11.08□□□□□ -0.64
TRAF1-202ENST00000540010 SAR1BQ9Y6B6 198 aa11.08□□□□□ -0.64
TRAF1-202ENST00000540010 A0A1B0GUL6 1792 aa11.07□□□□□ -0.64
TRAF1-202ENST00000540010 PALM3A6NDB9 673 aaPredicted RBP11.07□□□□□ -0.64
TRAF1-202ENST00000540010 CCNT1O60563 726 aaKnown RBP11.07□□□□□ -0.64
TRAF1-202ENST00000540010 ZMYND10O75800 440 aa11.07□□□□□ -0.64
TRAF1-202ENST00000540010 CTNNA2P26232 953 aa11.07□□□□□ -0.64
TRAF1-202ENST00000540010 PLS1Q14651 629 aa11.07□□□□□ -0.64
TRAF1-202ENST00000540010 TYW1BQ6NUM6 668 aa11.07□□□□□ -0.64
TRAF1-202ENST00000540010 USP49Q70CQ1 688 aa11.07□□□□□ -0.64
TRAF1-202ENST00000540010 SV2BQ7L1I2 683 aa11.07□□□□□ -0.64
TRAF1-202ENST00000540010 SECISBP2LQ93073 1101 aaKnown RBP11.07□□□□□ -0.64
TRAF1-202ENST00000540010 CAMKK2Q96RR4 588 aa11.07□□□□□ -0.64
TRAF1-202ENST00000540010 DHX36Q9H2U1 1008 aaKnown RBP11.07□□□□□ -0.64
TRAF1-202ENST00000540010 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.07□□□□□ -0.64
TRAF1-202ENST00000540010 HPSEQ9Y251 543 aa11.07□□□□□ -0.64
TRAF1-202ENST00000540010 USP27XA6NNY8 438 aa11.07□□□□□ -0.64
TRAF1-202ENST00000540010 POTEJP0CG39 1038 aa11.07□□□□□ -0.64
TRAF1-202ENST00000540010 CASP14P31944 242 aa11.07□□□□□ -0.64
TRAF1-202ENST00000540010 IQCB1Q15051 598 aa11.07□□□□□ -0.64
TRAF1-202ENST00000540010 ASPRV1Q53RT3 343 aa11.07□□□□□ -0.64
TRAF1-202ENST00000540010 GALNT17Q6IS24 598 aa11.07□□□□□ -0.64
TRAF1-202ENST00000540010 KLHL7Q8IXQ5 586 aa11.07□□□□□ -0.64
TRAF1-202ENST00000540010 CCDC155Q8N6L0 562 aa11.07□□□□□ -0.64
TRAF1-202ENST00000540010 ZNF579Q8NAF0 562 aaKnown RBP11.07□□□□□ -0.64
TRAF1-202ENST00000540010 OR8K1Q8NGG5 319 aa11.07□□□□□ -0.64
TRAF1-202ENST00000540010 CCDC17Q96LX7 622 aa11.07□□□□□ -0.64
TRAF1-202ENST00000540010 BARHL2Q9NY43 387 aa11.07□□□□□ -0.64
TRAF1-202ENST00000540010 PI4KBQ9UBF8 816 aa11.07□□□□□ -0.64
TRAF1-202ENST00000540010 FOXN1O15353 648 aa11.07□□□□□ -0.64
TRAF1-202ENST00000540010 CLCN6P51797 869 aa11.07□□□□□ -0.64
TRAF1-202ENST00000540010 NONOQ15233 471 aaKnown RBP eCLIP11.07□□□□□ -0.64
TRAF1-202ENST00000540010 ZDHHC15Q96MV8 337 aa11.07□□□□□ -0.64
TRAF1-202ENST00000540010 BIN2Q9UBW5 565 aaPredicted RBP11.07□□□□□ -0.64
TRAF1-202ENST00000540010 PCDHAC2Q9Y5I4 1007 aa11.07□□□□□ -0.64
TRAF1-202ENST00000540010 CASZ1Q86V15 1759 aa11.07□□□□□ -0.64
TRAF1-202ENST00000540010 CDC25AP30304 524 aa11.06□□□□□ -0.64
TRAF1-202ENST00000540010 TNIP1Q15025 636 aa11.06□□□□□ -0.64
TRAF1-202ENST00000540010 DACT2Q5SW24 774 aa11.06□□□□□ -0.64
TRAF1-202ENST00000540010 KRT25Q7Z3Z0 450 aa11.06□□□□□ -0.64
TRAF1-202ENST00000540010 SPZ1Q9BXG8 430 aa11.06□□□□□ -0.64
TRAF1-202ENST00000540010 CLRN2A0PK11 232 aa11.06□□□□□ -0.64
TRAF1-202ENST00000540010 TCP10L2B9ZVM9 353 aa11.06□□□□□ -0.64
TRAF1-202ENST00000540010 GJC1P36383 396 aa11.06□□□□□ -0.64
TRAF1-202ENST00000540010 SLC1A4P43007 532 aa11.06□□□□□ -0.64
TRAF1-202ENST00000540010 GYS2P54840 703 aa11.06□□□□□ -0.64
TRAF1-202ENST00000540010 KCTD1Q719H9 257 aa11.06□□□□□ -0.64
TRAF1-202ENST00000540010 METTL16Q86W50 562 aaKnown RBP11.06□□□□□ -0.64
TRAF1-202ENST00000540010 REXO1Q8N1G1 1221 aaKnown RBP11.06□□□□□ -0.64
TRAF1-202ENST00000540010 ARFGAP2Q8N6H7 521 aa11.06□□□□□ -0.64
TRAF1-202ENST00000540010 PDGFDQ9GZP0 370 aaPredicted RBP11.06□□□□□ -0.64
TRAF1-202ENST00000540010 ZNF277Q9NRM2 450 aaPredicted RBP11.06□□□□□ -0.64
TRAF1-202ENST00000540010 SAMSN1Q9NSI8 373 aaKnown RBP11.06□□□□□ -0.64
TRAF1-202ENST00000540010 STX10O60499 249 aa11.06□□□□□ -0.64
TRAF1-202ENST00000540010 SLC16A2P36021 539 aa11.06□□□□□ -0.64
TRAF1-202ENST00000540010 DLGAP5Q15398 846 aa11.06□□□□□ -0.64
TRAF1-202ENST00000540010 RTKN2Q8IZC4 609 aa11.06□□□□□ -0.64
TRAF1-202ENST00000540010 CYTH3O43739 400 aa11.05□□□□□ -0.64
TRAF1-202ENST00000540010 GDF11O95390 407 aa11.05□□□□□ -0.64
TRAF1-202ENST00000540010 TRIM14Q14142 442 aa11.05□□□□□ -0.64
TRAF1-202ENST00000540010 ZFPM1Q8IX07 1006 aa11.05□□□□□ -0.64
TRAF1-202ENST00000540010 DHX40Q8IX18 779 aaKnown RBP11.05□□□□□ -0.64
TRAF1-202ENST00000540010 SLC35F6Q8N357 371 aa11.05□□□□□ -0.64
TRAF1-202ENST00000540010 ERMNQ8TAM6 284 aa11.05□□□□□ -0.64
TRAF1-202ENST00000540010 COA7Q96BR5 231 aa11.05□□□□□ -0.64
TRAF1-202ENST00000540010 SHISA4Q96DD7 197 aa11.05□□□□□ -0.64
TRAF1-202ENST00000540010 EPC1Q9H2F5 836 aa11.05□□□□□ -0.64
TRAF1-202ENST00000540010 STXBP3O00186 592 aa11.05□□□□□ -0.64
TRAF1-202ENST00000540010 PDHBP11177 359 aa11.05□□□□□ -0.64
TRAF1-202ENST00000540010 INPP5BP32019 993 aa11.05□□□□□ -0.64
TRAF1-202ENST00000540010 NF2P35240 595 aa11.05□□□□□ -0.64
TRAF1-202ENST00000540010 TNNC1P63316 161 aa11.05□□□□□ -0.64
TRAF1-202ENST00000540010 BRD3Q15059 726 aa11.05□□□□□ -0.64
TRAF1-202ENST00000540010 GRIPAP1Q4V328 841 aa11.05□□□□□ -0.64
TRAF1-202ENST00000540010 RRAGAQ7L523 313 aa11.05□□□□□ -0.64
TRAF1-202ENST00000540010 HOOK3Q86VS8 718 aa11.05□□□□□ -0.64
TRAF1-202ENST00000540010 NIM1KQ8IY84 436 aa11.05□□□□□ -0.64
TRAF1-202ENST00000540010 TBC1D5Q92609 795 aa11.05□□□□□ -0.64
TRAF1-202ENST00000540010 MAST2Q6P0Q8 1798 aa11.05□□□□□ -0.64
TRAF1-202ENST00000540010 KCNJ18B7U540 433 aa11.05□□□□□ -0.64
TRAF1-202ENST00000540010 ZBTB7AO95365 584 aa11.05□□□□□ -0.64
TRAF1-202ENST00000540010 SLURP2P0DP57 97 aa11.05□□□□□ -0.64
TRAF1-202ENST00000540010 POLD1P28340 1107 aa11.05□□□□□ -0.64
TRAF1-202ENST00000540010 ADCY7P51828 1080 aa11.05□□□□□ -0.64
TRAF1-202ENST00000540010 KCNJ12Q14500 433 aa11.05□□□□□ -0.64
TRAF1-202ENST00000540010 NELFCDQ8IXH7 590 aa11.05□□□□□ -0.64
TRAF1-202ENST00000540010 CSRNP1Q96S65 589 aa11.05□□□□□ -0.64
TRAF1-202ENST00000540010 A0A1W2PRG0 241 aa11.05□□□□□ -0.64
TRAF1-202ENST00000540010 DPEP1P16444 411 aa11.05□□□□□ -0.64
TRAF1-202ENST00000540010 ATP2C1P98194 919 aaPredicted RBP11.05□□□□□ -0.64
TRAF1-202ENST00000540010 ICA1Q05084 483 aa11.05□□□□□ -0.64
TRAF1-202ENST00000540010 LONRF2Q1L5Z9 754 aa11.05□□□□□ -0.64
TRAF1-202ENST00000540010 RBM26Q5T8P6 1007 aaKnown RBP11.05□□□□□ -0.64
TRAF1-202ENST00000540010 IFIH1Q9BYX4 1025 aaKnown RBP11.05□□□□□ -0.64
TRAF1-202ENST00000540010 ZCCHC17Q9NP64 241 aaKnown RBP11.05□□□□□ -0.64
TRAF1-202ENST00000540010 DDX41Q9UJV9 622 aaKnown RBP11.05□□□□□ -0.64
TRAF1-202ENST00000540010 ATF5Q9Y2D1 282 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms