RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 PDGFRBP09619 1106 aa6.74□□□□□ -1.33
SNHG1-211ENST00000539921 TSPY4P0CV99 314 aa6.74□□□□□ -1.33
SNHG1-211ENST00000539921 TSPY10P0CW01 314 aa6.74□□□□□ -1.33
SNHG1-211ENST00000539921 PIM1P11309 404 aaPredicted RBP6.74□□□□□ -1.33
SNHG1-211ENST00000539921 SKIP12755 728 aa6.74□□□□□ -1.33
SNHG1-211ENST00000539921 CMA1P23946 247 aa6.74□□□□□ -1.33
SNHG1-211ENST00000539921 ERCC5P28715 1186 aaPredicted RBP6.74□□□□□ -1.33
SNHG1-211ENST00000539921 GSTT1P30711 240 aa6.74□□□□□ -1.33
SNHG1-211ENST00000539921 COPB2P35606 906 aa6.74□□□□□ -1.33
SNHG1-211ENST00000539921 PDE6BP35913 854 aa6.74□□□□□ -1.33
SNHG1-211ENST00000539921 HSPA9P38646 679 aaKnown RBP6.74□□□□□ -1.33
SNHG1-211ENST00000539921 PBX1P40424 430 aa6.74□□□□□ -1.33
SNHG1-211ENST00000539921 MLH1P40692 756 aa6.74□□□□□ -1.33
SNHG1-211ENST00000539921 MLLT3P42568 568 aaPredicted RBP6.74□□□□□ -1.33
SNHG1-211ENST00000539921 CCT4P50991 539 aaKnown RBP6.74□□□□□ -1.33
SNHG1-211ENST00000539921 RHBDL3P58872 404 aa6.74□□□□□ -1.33
SNHG1-211ENST00000539921 MTMR3Q13615 1198 aa6.74□□□□□ -1.33
SNHG1-211ENST00000539921 SUZ12Q15022 739 aaKnown RBP6.74□□□□□ -1.33
SNHG1-211ENST00000539921 GALNT17Q6IS24 598 aa6.74□□□□□ -1.33
SNHG1-211ENST00000539921 NEPROQ6NW34 567 aa6.74□□□□□ -1.33
SNHG1-211ENST00000539921 CYP26C1Q6V0L0 522 aa6.74□□□□□ -1.33
SNHG1-211ENST00000539921 PACS1Q6VY07 963 aa6.74□□□□□ -1.33
SNHG1-211ENST00000539921 BARGINQ6ZT62 677 aa6.74□□□□□ -1.33
SNHG1-211ENST00000539921 SND1Q7KZF4 910 aaKnown RBP eCLIP6.74□□□□□ -1.33
SNHG1-211ENST00000539921 PIGWQ7Z7B1 504 aa6.74□□□□□ -1.33
SNHG1-211ENST00000539921 CROCCP3Q8IVE0 287 aa6.74□□□□□ -1.33
SNHG1-211ENST00000539921 KIRREL3Q8IZU9 778 aa6.74□□□□□ -1.33
SNHG1-211ENST00000539921 TTC39CQ8N584 583 aa6.74□□□□□ -1.33
SNHG1-211ENST00000539921 TMC2Q8TDI7 906 aa6.74□□□□□ -1.33
SNHG1-211ENST00000539921 DQX1Q8TE96 717 aaKnown RBP6.74□□□□□ -1.33
SNHG1-211ENST00000539921 DIS3LQ8TF46 1054 aaKnown RBP6.74□□□□□ -1.33
SNHG1-211ENST00000539921 CHMP7Q8WUX9 453 aaPredicted RBP6.74□□□□□ -1.33
SNHG1-211ENST00000539921 WDR60Q8WVS4 1066 aa6.74□□□□□ -1.33
SNHG1-211ENST00000539921 GIMAP1Q8WWP7 306 aa6.74□□□□□ -1.33
SNHG1-211ENST00000539921 RIN2Q8WYP3 895 aaPredicted RBP6.74□□□□□ -1.33
SNHG1-211ENST00000539921 DDX12PQ92771 950 aa6.74□□□□□ -1.33
SNHG1-211ENST00000539921 LENG1Q96BZ8 264 aaPredicted RBP6.74□□□□□ -1.33
SNHG1-211ENST00000539921 CHMP6Q96FZ7 201 aa6.74□□□□□ -1.33
SNHG1-211ENST00000539921 ABHD8Q96I13 439 aa6.74□□□□□ -1.33
SNHG1-211ENST00000539921 CCDC85AQ96PX6 553 aaPredicted RBP6.74□□□□□ -1.33
SNHG1-211ENST00000539921 CDC5LQ99459 802 aaKnown RBP6.74□□□□□ -1.33
SNHG1-211ENST00000539921 HNRNPABQ99729 332 aaKnown RBP6.74□□□□□ -1.33
SNHG1-211ENST00000539921 CENPKQ9BS16 269 aa6.74□□□□□ -1.33
SNHG1-211ENST00000539921 RTFDC1Q9BY42 306 aaPredicted RBP6.74□□□□□ -1.33
SNHG1-211ENST00000539921 TANGO6Q9C0B7 1094 aa6.74□□□□□ -1.33
SNHG1-211ENST00000539921 RAB17Q9H0T7 212 aa6.74□□□□□ -1.33
SNHG1-211ENST00000539921 CARD9Q9H257 536 aa6.74□□□□□ -1.33
SNHG1-211ENST00000539921 RNPEPL1Q9HAU8 725 aa6.74□□□□□ -1.33
SNHG1-211ENST00000539921 FAM114A2Q9NRY5 505 aa6.74□□□□□ -1.33
SNHG1-211ENST00000539921 EMILIN3Q9NT22 766 aa6.74□□□□□ -1.33
SNHG1-211ENST00000539921 PTTG2Q9NZH5 202 aa6.74□□□□□ -1.33
SNHG1-211ENST00000539921 TBC1D7Q9P0N9 293 aa6.74□□□□□ -1.33
SNHG1-211ENST00000539921 STIM2Q9P246 746 aa6.74□□□□□ -1.33
SNHG1-211ENST00000539921 MAGEC2Q9UBF1 373 aaPredicted RBP6.74□□□□□ -1.33
SNHG1-211ENST00000539921 WWC3Q9ULE0 1092 aa6.74□□□□□ -1.33
SNHG1-211ENST00000539921 TTC7AQ9ULT0 858 aaPredicted RBP6.74□□□□□ -1.33
SNHG1-211ENST00000539921 CARD8Q9Y2G2 431 aa6.74□□□□□ -1.33
SNHG1-211ENST00000539921 LUC7L2Q9Y383 392 aaKnown RBP6.74□□□□□ -1.33
SNHG1-211ENST00000539921 ARIH1Q9Y4X5 557 aaPredicted RBP6.74□□□□□ -1.33
SNHG1-211ENST00000539921 RIMBP3CA6NJZ7 1639 aa6.74□□□□□ -1.33
SNHG1-211ENST00000539921 RIMBP3BA6NNM3 1639 aa6.74□□□□□ -1.33
SNHG1-211ENST00000539921 RIMBP3Q9UFD9 1639 aa6.74□□□□□ -1.33
SNHG1-211ENST00000539921 DLC1Q96QB1 1528 aa6.74□□□□□ -1.33
SNHG1-211ENST00000539921 RFX7Q2KHR2 1363 aa6.73□□□□□ -1.33
SNHG1-211ENST00000539921 AKAP12Q02952 1782 aa6.73□□□□□ -1.33
SNHG1-211ENST00000539921 DPYSL4O14531 572 aa6.73□□□□□ -1.33
SNHG1-211ENST00000539921 OPLAHO14841 1288 aa6.73□□□□□ -1.33
SNHG1-211ENST00000539921 ECE2O60344 883 aa6.73□□□□□ -1.33
SNHG1-211ENST00000539921 HNRNPCL1O60812 293 aaKnown RBP6.73□□□□□ -1.33
SNHG1-211ENST00000539921 CBFA2T3O75081 653 aa6.73□□□□□ -1.33
SNHG1-211ENST00000539921 SSBP05455 408 aaKnown RBP eCLIP6.73□□□□□ -1.33
SNHG1-211ENST00000539921 MMEP08473 750 aa6.73□□□□□ -1.33
SNHG1-211ENST00000539921 CLTAP09496 248 aa6.73□□□□□ -1.33
SNHG1-211ENST00000539921 CCNB1P14635 433 aa6.73□□□□□ -1.33
SNHG1-211ENST00000539921 TCP1P17987 556 aaKnown RBP6.73□□□□□ -1.33
SNHG1-211ENST00000539921 DRD4P21917 467 aa6.73□□□□□ -1.33
SNHG1-211ENST00000539921 HOXD10P28358 340 aa6.73□□□□□ -1.33
SNHG1-211ENST00000539921 RGS2P41220 211 aa6.73□□□□□ -1.33
SNHG1-211ENST00000539921 GEMIN4P57678 1058 aaKnown RBP6.73□□□□□ -1.33
SNHG1-211ENST00000539921 BPIFB4P59827 614 aa6.73□□□□□ -1.33
SNHG1-211ENST00000539921 RPL26P61254 145 aaKnown RBP6.73□□□□□ -1.33
SNHG1-211ENST00000539921 SLC7A5Q01650 507 aa6.73□□□□□ -1.33
SNHG1-211ENST00000539921 ZBTB17Q13105 803 aa6.73□□□□□ -1.33
SNHG1-211ENST00000539921 KARSQ15046 597 aaKnown RBP6.73□□□□□ -1.33
SNHG1-211ENST00000539921 RRS1Q15050 365 aaKnown RBP6.73□□□□□ -1.33
SNHG1-211ENST00000539921 RCN1Q15293 331 aa6.73□□□□□ -1.33
SNHG1-211ENST00000539921 NFE2L2Q16236 605 aa6.73□□□□□ -1.33
SNHG1-211ENST00000539921 NDUFA5Q16718 116 aa6.73□□□□□ -1.33
SNHG1-211ENST00000539921 MAP7D1Q3KQU3 841 aa6.73□□□□□ -1.33
SNHG1-211ENST00000539921 GALNTL6Q49A17 601 aa6.73□□□□□ -1.33
SNHG1-211ENST00000539921 WASHC2DQ5SRD0 308 aa6.73□□□□□ -1.33
SNHG1-211ENST00000539921 SYCP2LQ5T4T6 812 aa6.73□□□□□ -1.33
SNHG1-211ENST00000539921 NOL8Q76FK4 1167 aaKnown RBP6.73□□□□□ -1.33
SNHG1-211ENST00000539921 PPFIBP1Q86W92 1011 aa6.73□□□□□ -1.33
SNHG1-211ENST00000539921 IFT20Q8IY31 132 aa6.73□□□□□ -1.33
SNHG1-211ENST00000539921 C16orf71Q8IYS4 520 aaPredicted RBP6.73□□□□□ -1.33
SNHG1-211ENST00000539921 DEPTORQ8TB45 409 aa6.73□□□□□ -1.33
SNHG1-211ENST00000539921 FBXO41Q8TF61 875 aa6.73□□□□□ -1.33
SNHG1-211ENST00000539921 SYTL4Q96C24 671 aaPredicted RBP6.73□□□□□ -1.33
SNHG1-211ENST00000539921 LRRC45Q96CN5 670 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms