RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 IWS1Q96ST2 819 aa17.83■□□□□ 0.44
UBE3B-211ENST00000539843 NOC4LQ9BVI4 516 aaKnown RBP17.83■□□□□ 0.44
UBE3B-211ENST00000539843 TRPV6Q9H1D0 765 aa17.83■□□□□ 0.44
UBE3B-211ENST00000539843 ZNF576Q9H609 170 aa17.83■□□□□ 0.44
UBE3B-211ENST00000539843 U3KPZ7 1027 aaPredicted RBP17.83■□□□□ 0.44
UBE3B-211ENST00000539843 DNAH12Q6ZR08 3092 aa17.83■□□□□ 0.44
UBE3B-211ENST00000539843 PTPN11Q06124 597 aaPredicted RBP17.82■□□□□ 0.44
UBE3B-211ENST00000539843 QRICH1Q2TAL8 776 aa17.82■□□□□ 0.44
UBE3B-211ENST00000539843 RETREG2Q8NC44 543 aa17.82■□□□□ 0.44
UBE3B-211ENST00000539843 RMDN3Q96TC7 470 aa17.82■□□□□ 0.44
UBE3B-211ENST00000539843 AMNQ9BXJ7 453 aa17.82■□□□□ 0.44
UBE3B-211ENST00000539843 VAT1LQ9HCJ6 419 aa17.82■□□□□ 0.44
UBE3B-211ENST00000539843 LAMA4Q16363 1823 aa17.82■□□□□ 0.44
UBE3B-211ENST00000539843 GRIN2DO15399 1336 aa17.81■□□□□ 0.44
UBE3B-211ENST00000539843 ZBBXA8MT70 800 aa17.81■□□□□ 0.44
UBE3B-211ENST00000539843 GH1P01241 217 aa17.81■□□□□ 0.44
UBE3B-211ENST00000539843 ACTN1P12814 892 aa17.81■□□□□ 0.44
UBE3B-211ENST00000539843 PTGS1P23219 599 aa17.81■□□□□ 0.44
UBE3B-211ENST00000539843 TTC22Q5TAA0 569 aa17.81■□□□□ 0.44
UBE3B-211ENST00000539843 RASIP1Q5U651 963 aa17.81■□□□□ 0.44
UBE3B-211ENST00000539843 NFRKBQ6P4R8 1299 aa17.81■□□□□ 0.44
UBE3B-211ENST00000539843 C16orf59Q7L2K0 433 aa17.81■□□□□ 0.44
UBE3B-211ENST00000539843 OTOP2Q7RTS6 562 aa17.81■□□□□ 0.44
UBE3B-211ENST00000539843 CCDC155Q8N6L0 562 aa17.81■□□□□ 0.44
UBE3B-211ENST00000539843 SYTL5Q8TDW5 730 aaPredicted RBP17.81■□□□□ 0.44
UBE3B-211ENST00000539843 PBX4Q9BYU1 374 aa17.81■□□□□ 0.44
UBE3B-211ENST00000539843 CPVLQ9H3G5 476 aa17.81■□□□□ 0.44
UBE3B-211ENST00000539843 A6NJR5 290 aa17.8■□□□□ 0.44
UBE3B-211ENST00000539843 RFC2P35250 354 aa17.8■□□□□ 0.44
UBE3B-211ENST00000539843 CHMP4BP1P59074 171 aa17.8■□□□□ 0.44
UBE3B-211ENST00000539843 BFSP2Q13515 415 aa17.8■□□□□ 0.44
UBE3B-211ENST00000539843 TMEM63BQ5T3F8 832 aa17.8■□□□□ 0.44
UBE3B-211ENST00000539843 SEPT14Q6ZU15 432 aa17.8■□□□□ 0.44
UBE3B-211ENST00000539843 SLC28A3Q9HAS3 691 aa17.8■□□□□ 0.44
UBE3B-211ENST00000539843 TRMT13Q9NUP7 481 aaKnown RBP17.8■□□□□ 0.44
UBE3B-211ENST00000539843 MAP3K20Q9NYL2 800 aaKnown RBP17.8■□□□□ 0.44
UBE3B-211ENST00000539843 SUPT16HQ9Y5B9 1047 aaKnown RBP17.8■□□□□ 0.44
UBE3B-211ENST00000539843 SLC4A7Q9Y6M7 1214 aa17.8■□□□□ 0.44
UBE3B-211ENST00000539843 KLRF2D3W0D1 207 aa17.79■□□□□ 0.44
UBE3B-211ENST00000539843 CFBP00751 764 aa17.79■□□□□ 0.44
UBE3B-211ENST00000539843 CASTP20810 708 aaKnown RBP17.79■□□□□ 0.44
UBE3B-211ENST00000539843 GRIN2CQ14957 1233 aa17.79■□□□□ 0.44
UBE3B-211ENST00000539843 NBPF20Q3BBV1 942 aa17.79■□□□□ 0.44
UBE3B-211ENST00000539843 SAMD3Q8N6K7 520 aa17.79■□□□□ 0.44
UBE3B-211ENST00000539843 JMJD4Q9H9V9 463 aa17.79■□□□□ 0.44
UBE3B-211ENST00000539843 UMODL1Q5DID0 1318 aa17.78■□□□□ 0.44
UBE3B-211ENST00000539843 PITPNM1O00562 1244 aa17.78■□□□□ 0.44
UBE3B-211ENST00000539843 IFIT3O14879 490 aaKnown RBP17.78■□□□□ 0.44
UBE3B-211ENST00000539843 EIF3JO75822 258 aaKnown RBP17.78■□□□□ 0.44
UBE3B-211ENST00000539843 CYP2C9P11712 490 aa17.78■□□□□ 0.44
UBE3B-211ENST00000539843 SYMPKQ92797 1274 aaKnown RBP17.78■□□□□ 0.44
UBE3B-211ENST00000539843 TAAR1Q96RJ0 339 aa17.78■□□□□ 0.44
UBE3B-211ENST00000539843 KATNAL1Q9BW62 490 aa17.78■□□□□ 0.44
UBE3B-211ENST00000539843 WNT8AQ9H1J5 351 aa17.78■□□□□ 0.44
UBE3B-211ENST00000539843 MRVI1Q9Y6F6 885 aa17.78■□□□□ 0.44
UBE3B-211ENST00000539843 LCTP09848 1927 aa17.78■□□□□ 0.44
UBE3B-211ENST00000539843 ZBTB5O15062 677 aa17.77■□□□□ 0.44
UBE3B-211ENST00000539843 EIF2AK2P19525 551 aaKnown RBP17.77■□□□□ 0.44
UBE3B-211ENST00000539843 WTAPQ15007 396 aa17.77■□□□□ 0.44
UBE3B-211ENST00000539843 DGKDQ16760 1214 aa17.77■□□□□ 0.44
UBE3B-211ENST00000539843 KCNV1Q6PIU1 500 aa17.77■□□□□ 0.44
UBE3B-211ENST00000539843 CHST3Q7LGC8 479 aa17.77■□□□□ 0.44
UBE3B-211ENST00000539843 NCOA7Q8NI08 942 aa17.77■□□□□ 0.44
UBE3B-211ENST00000539843 COPS5Q92905 334 aa17.77■□□□□ 0.44
UBE3B-211ENST00000539843 SCLYQ96I15 445 aa17.77■□□□□ 0.44
UBE3B-211ENST00000539843 PCDHA1Q9Y5I3 950 aa17.77■□□□□ 0.44
UBE3B-211ENST00000539843 GRXCR1A8MXD5 290 aa17.76■□□□□ 0.43
UBE3B-211ENST00000539843 MMP3P08254 477 aa17.76■□□□□ 0.43
UBE3B-211ENST00000539843 GSPT1P15170 499 aaKnown RBP17.76■□□□□ 0.43
UBE3B-211ENST00000539843 ATP2A2P16615 1042 aaKnown RBP17.76■□□□□ 0.43
UBE3B-211ENST00000539843 PBX2P40425 430 aa17.76■□□□□ 0.43
UBE3B-211ENST00000539843 LAMC2Q13753 1193 aa17.76■□□□□ 0.43
UBE3B-211ENST00000539843 DEFB128Q7Z7B8 93 aa17.76■□□□□ 0.43
UBE3B-211ENST00000539843 CATIPQ7Z7H3 387 aa17.76■□□□□ 0.43
UBE3B-211ENST00000539843 HOMER1Q86YM7 354 aa17.76■□□□□ 0.43
UBE3B-211ENST00000539843 CAGE1Q8TC20 777 aa17.76■□□□□ 0.43
UBE3B-211ENST00000539843 AFG1LQ8WV93 481 aa17.76■□□□□ 0.43
UBE3B-211ENST00000539843 FTOQ9C0B1 505 aaKnown RBP eCLIP17.76■□□□□ 0.43
UBE3B-211ENST00000539843 PXMP2Q9NR77 195 aa17.76■□□□□ 0.43
UBE3B-211ENST00000539843 CXXC1Q9P0U4 656 aaPredicted RBP17.76■□□□□ 0.43
UBE3B-211ENST00000539843 NR3C2P08235 984 aa17.75■□□□□ 0.43
UBE3B-211ENST00000539843 PTGISQ16647 500 aa17.75■□□□□ 0.43
UBE3B-211ENST00000539843 LY6KQ17RY6 165 aa17.75■□□□□ 0.43
UBE3B-211ENST00000539843 PPP2R2DQ66LE6 453 aa17.75■□□□□ 0.43
UBE3B-211ENST00000539843 CCDC62Q6P9F0 684 aa17.75■□□□□ 0.43
UBE3B-211ENST00000539843 STAG2Q8N3U4 1231 aa17.75■□□□□ 0.43
UBE3B-211ENST00000539843 C7orf31Q8N865 590 aa17.75■□□□□ 0.43
UBE3B-211ENST00000539843 COL25A1Q9BXS0 654 aaPredicted RBP17.75■□□□□ 0.43
UBE3B-211ENST00000539843 NKX2-4Q9H2Z4 354 aa17.75■□□□□ 0.43
UBE3B-211ENST00000539843 KIF28PB7ZC32 967 aa17.74■□□□□ 0.43
UBE3B-211ENST00000539843 GCOM1H8Y6P7 765 aaPredicted RBP17.74■□□□□ 0.43
UBE3B-211ENST00000539843 ARIH2O95376 493 aa17.74■□□□□ 0.43
UBE3B-211ENST00000539843 PARNO95453 639 aaKnown RBP17.74■□□□□ 0.43
UBE3B-211ENST00000539843 POLR2MP0CAP2 368 aa17.74■□□□□ 0.43
UBE3B-211ENST00000539843 MYCLP12524 364 aaPredicted RBP17.74■□□□□ 0.43
UBE3B-211ENST00000539843 CHMLP26374 656 aa17.74■□□□□ 0.43
UBE3B-211ENST00000539843 SEC23AQ15436 765 aa17.74■□□□□ 0.43
UBE3B-211ENST00000539843 DHX37Q8IY37 1157 aaKnown RBP17.74■□□□□ 0.43
UBE3B-211ENST00000539843 AFAP1L1Q8TED9 768 aa17.74■□□□□ 0.43
UBE3B-211ENST00000539843 TBC1D5Q92609 795 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms