RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 CDK5RAP3Q96JB5 506 aa13.34□□□□□ -0.27
VTN-202ENST00000539746 SPATC1LQ9H0A9 340 aa13.34□□□□□ -0.27
VTN-202ENST00000539746 NT5C3AQ9H0P0 336 aa13.34□□□□□ -0.27
VTN-202ENST00000539746 RAVER2Q9HCJ3 691 aaKnown RBP13.34□□□□□ -0.27
VTN-202ENST00000539746 FBXO28Q9NVF7 368 aa13.34□□□□□ -0.27
VTN-202ENST00000539746 CLIC4Q9Y696 253 aa13.34□□□□□ -0.27
VTN-202ENST00000539746 LOC285556D6RIA3 1793 aa13.34□□□□□ -0.27
VTN-202ENST00000539746 PDHXO00330 501 aa13.33□□□□□ -0.28
VTN-202ENST00000539746 MEIS2O14770 477 aa13.33□□□□□ -0.28
VTN-202ENST00000539746 FCER1AP12319 257 aa13.33□□□□□ -0.28
VTN-202ENST00000539746 MUTP22033 750 aa13.33□□□□□ -0.28
VTN-202ENST00000539746 SYKP43405 635 aa13.33□□□□□ -0.28
VTN-202ENST00000539746 PTPAQ15257 358 aa13.33□□□□□ -0.28
VTN-202ENST00000539746 KIAA1755Q5JYT7 1200 aa13.33□□□□□ -0.28
VTN-202ENST00000539746 ARHGEF16Q5VV41 709 aa13.33□□□□□ -0.28
VTN-202ENST00000539746 KRT79Q5XKE5 535 aa13.33□□□□□ -0.28
VTN-202ENST00000539746 PCNX4Q63HM2 1172 aa13.33□□□□□ -0.28
VTN-202ENST00000539746 TYW1BQ6NUM6 668 aa13.33□□□□□ -0.28
VTN-202ENST00000539746 CCDC84Q86UT8 332 aaPredicted RBP13.33□□□□□ -0.28
VTN-202ENST00000539746 NEK9Q8TD19 979 aa13.33□□□□□ -0.28
VTN-202ENST00000539746 AGBL1Q96MI9 1066 aa13.33□□□□□ -0.28
VTN-202ENST00000539746 NUP62CLQ9H1M0 184 aa13.33□□□□□ -0.28
VTN-202ENST00000539746 GJB4Q9NTQ9 266 aa13.33□□□□□ -0.28
VTN-202ENST00000539746 ZNF214Q9UL59 606 aaPredicted RBP13.33□□□□□ -0.28
VTN-202ENST00000539746 PCDHA7Q9UN72 937 aa13.33□□□□□ -0.28
VTN-202ENST00000539746 PHIPQ8WWQ0 1821 aa13.32□□□□□ -0.28
VTN-202ENST00000539746 SLC10A3P09131 477 aa13.32□□□□□ -0.28
VTN-202ENST00000539746 POTEIP0CG38 1075 aa13.32□□□□□ -0.28
VTN-202ENST00000539746 POTEJP0CG39 1038 aa13.32□□□□□ -0.28
VTN-202ENST00000539746 YY1P25490 414 aa13.32□□□□□ -0.28
VTN-202ENST00000539746 FXR2P51116 673 aaKnown RBP eCLIP13.32□□□□□ -0.28
VTN-202ENST00000539746 TMEM132BQ14DG7 1078 aa13.32□□□□□ -0.28
VTN-202ENST00000539746 ZNF174Q15697 407 aa13.32□□□□□ -0.28
VTN-202ENST00000539746 FAM110CQ1W6H9 321 aa13.32□□□□□ -0.28
VTN-202ENST00000539746 CEP55Q53EZ4 464 aa13.32□□□□□ -0.28
VTN-202ENST00000539746 NSMFQ6X4W1 530 aa13.32□□□□□ -0.28
VTN-202ENST00000539746 RASGRP2Q7LDG7 609 aa13.32□□□□□ -0.28
VTN-202ENST00000539746 FCHSD1Q86WN1 690 aa13.32□□□□□ -0.28
VTN-202ENST00000539746 FSIP1Q8NA03 581 aa13.32□□□□□ -0.28
VTN-202ENST00000539746 RMDN3Q96TC7 470 aa13.32□□□□□ -0.28
VTN-202ENST00000539746 SDF4Q9BRK5 362 aa13.32□□□□□ -0.28
VTN-202ENST00000539746 NAT10Q9H0A0 1025 aaKnown RBP13.32□□□□□ -0.28
VTN-202ENST00000539746 TNMDQ9H2S6 317 aa13.32□□□□□ -0.28
VTN-202ENST00000539746 ZFYVE28Q9HCC9 887 aa13.32□□□□□ -0.28
VTN-202ENST00000539746 CREBZFQ9NS37 354 aa13.32□□□□□ -0.28
VTN-202ENST00000539746 TBC1D22BQ9NU19 505 aa13.32□□□□□ -0.28
VTN-202ENST00000539746 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.32□□□□□ -0.28
VTN-202ENST00000539746 MORF4L1Q9UBU8 362 aa13.32□□□□□ -0.28
VTN-202ENST00000539746 PCDHA12Q9UN75 941 aa13.32□□□□□ -0.28
VTN-202ENST00000539746 PCDHB6Q9Y5E3 794 aa13.32□□□□□ -0.28
VTN-202ENST00000539746 ZNF536O15090 1300 aa13.32□□□□□ -0.28
VTN-202ENST00000539746 FAM237AA0A1B0GTK4 181 aa13.31□□□□□ -0.28
VTN-202ENST00000539746 ASB14A6NK59 587 aa13.31□□□□□ -0.28
VTN-202ENST00000539746 SMC2O95347 1197 aa13.31□□□□□ -0.28
VTN-202ENST00000539746 TOB1P50616 345 aaPredicted RBP13.31□□□□□ -0.28
VTN-202ENST00000539746 IRF5Q13568 498 aa13.31□□□□□ -0.28
VTN-202ENST00000539746 TREML2Q5T2D2 321 aa13.31□□□□□ -0.28
VTN-202ENST00000539746 RESP18Q5W5W9 173 aa13.31□□□□□ -0.28
VTN-202ENST00000539746 FAM173BQ6P4H8 233 aa13.31□□□□□ -0.28
VTN-202ENST00000539746 USP17L6PQ6QN14 398 aa13.31□□□□□ -0.28
VTN-202ENST00000539746 NCAPG2Q86XI2 1143 aa13.31□□□□□ -0.28
VTN-202ENST00000539746 MSL3Q8N5Y2 521 aaKnown RBP13.31□□□□□ -0.28
VTN-202ENST00000539746 REPS2Q8NFH8 660 aa13.31□□□□□ -0.28
VTN-202ENST00000539746 ANP32BQ92688 251 aaKnown RBP13.31□□□□□ -0.28
VTN-202ENST00000539746 MBOAT7Q96N66 472 aa13.31□□□□□ -0.28
VTN-202ENST00000539746 P2RX7Q99572 595 aaKnown RBP13.31□□□□□ -0.28
VTN-202ENST00000539746 RIT2Q99578 217 aa13.31□□□□□ -0.28
VTN-202ENST00000539746 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.31□□□□□ -0.28
VTN-202ENST00000539746 KCNH3Q9ULD8 1083 aa13.31□□□□□ -0.28
VTN-202ENST00000539746 FRMPD4Q14CM0 1322 aa13.31□□□□□ -0.28
VTN-202ENST00000539746 TRPM7Q96QT4 1865 aa13.31□□□□□ -0.28
VTN-202ENST00000539746 POLR2AP24928 1970 aaKnown RBP13.31□□□□□ -0.28
VTN-202ENST00000539746 OTOFQ9HC10 1997 aa13.31□□□□□ -0.28
VTN-202ENST00000539746 VWA3AA6NCI4 1184 aa13.3□□□□□ -0.28
VTN-202ENST00000539746 POTEB2H3BUK9 544 aa13.3□□□□□ -0.28
VTN-202ENST00000539746 KIF3CO14782 793 aa13.3□□□□□ -0.28
VTN-202ENST00000539746 HOXC6P09630 235 aa13.3□□□□□ -0.28
VTN-202ENST00000539746 CCDC192P0DO97 292 aa13.3□□□□□ -0.28
VTN-202ENST00000539746 RPS6P62753 249 aaKnown RBP13.3□□□□□ -0.28
VTN-202ENST00000539746 ERVK-9P63128 1117 aa13.3□□□□□ -0.28
VTN-202ENST00000539746 ERVK-24P63145 666 aa13.3□□□□□ -0.28
VTN-202ENST00000539746 STXBP2Q15833 593 aa13.3□□□□□ -0.28
VTN-202ENST00000539746 UBE2SQ16763 222 aa13.3□□□□□ -0.28
VTN-202ENST00000539746 CST9Q5W186 159 aa13.3□□□□□ -0.28
VTN-202ENST00000539746 RASAL3Q86YV0 1011 aa13.3□□□□□ -0.28
VTN-202ENST00000539746 RDM1Q8NG50 284 aa13.3□□□□□ -0.28
VTN-202ENST00000539746 CLEC4DQ8WXI8 215 aa13.3□□□□□ -0.28
VTN-202ENST00000539746 GPRASP2Q96D09 838 aa13.3□□□□□ -0.28
VTN-202ENST00000539746 MS4A4AQ96JQ5 239 aa13.3□□□□□ -0.28
VTN-202ENST00000539746 PAGR1Q9BTK6 254 aa13.3□□□□□ -0.28
VTN-202ENST00000539746 GDPD2Q9HCC8 539 aa13.3□□□□□ -0.28
VTN-202ENST00000539746 HOMER2Q9NSB8 354 aa13.3□□□□□ -0.28
VTN-202ENST00000539746 BMP2KQ9NSY1 1161 aaPredicted RBP13.3□□□□□ -0.28
VTN-202ENST00000539746 RMND1Q9NWS8 449 aa13.3□□□□□ -0.28
VTN-202ENST00000539746 LRWD1Q9UFC0 647 aa13.3□□□□□ -0.28
VTN-202ENST00000539746 DACH1Q9UI36 760 aa13.3□□□□□ -0.28
VTN-202ENST00000539746 FBXO2Q9UK22 296 aaPredicted RBP13.3□□□□□ -0.28
VTN-202ENST00000539746 EIF3JO75822 258 aaKnown RBP13.29□□□□□ -0.28
VTN-202ENST00000539746 TGFB3P10600 412 aa13.29□□□□□ -0.28
VTN-202ENST00000539746 MARCKSP29966 332 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms