RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 ATF3P18847 181 aa4.76□□□□□ -1.65
AC055720.1-201ENST00000539552 POU3F3P20264 500 aaPredicted RBP4.76□□□□□ -1.65
AC055720.1-201ENST00000539552 CNGA1P29973 690 aa4.76□□□□□ -1.65
AC055720.1-201ENST00000539552 COPB2P35606 906 aa4.76□□□□□ -1.65
AC055720.1-201ENST00000539552 SOX9P48436 509 aa4.76□□□□□ -1.65
AC055720.1-201ENST00000539552 FAM160A1Q05DH4 1040 aa4.76□□□□□ -1.65
AC055720.1-201ENST00000539552 TCEA2Q15560 299 aa4.76□□□□□ -1.65
AC055720.1-201ENST00000539552 CWF19L2Q2TBE0 894 aaKnown RBP4.76□□□□□ -1.65
AC055720.1-201ENST00000539552 TMEM95Q3KNT9 176 aa4.76□□□□□ -1.65
AC055720.1-201ENST00000539552 PPM1JQ5JR12 505 aa4.76□□□□□ -1.65
AC055720.1-201ENST00000539552 TPTE2Q6XPS3 522 aa4.76□□□□□ -1.65
AC055720.1-201ENST00000539552 GOLM1Q8NBJ4 401 aa4.76□□□□□ -1.65
AC055720.1-201ENST00000539552 OR6P1Q8NGX9 317 aa4.76□□□□□ -1.65
AC055720.1-201ENST00000539552 SVIPQ8NHG7 77 aa4.76□□□□□ -1.65
AC055720.1-201ENST00000539552 UBE2FQ969M7 185 aa4.76□□□□□ -1.65
AC055720.1-201ENST00000539552 SEMA3GQ9NS98 782 aa4.76□□□□□ -1.65
AC055720.1-201ENST00000539552 ACTR10Q9NZ32 417 aa4.76□□□□□ -1.65
AC055720.1-201ENST00000539552 ZSWIM5Q9P217 1185 aa4.76□□□□□ -1.65
AC055720.1-201ENST00000539552 KCTD3Q9Y597 815 aa4.76□□□□□ -1.65
AC055720.1-201ENST00000539552 CSADQ9Y600 493 aa4.76□□□□□ -1.65
AC055720.1-201ENST00000539552 HECW1Q76N89 1606 aa4.75□□□□□ -1.65
AC055720.1-201ENST00000539552 WDR90Q96KV7 1748 aa4.75□□□□□ -1.65
AC055720.1-201ENST00000539552 DIP2AQ14689 1571 aa4.75□□□□□ -1.65
AC055720.1-201ENST00000539552 F6X3S4 739 aa4.75□□□□□ -1.65
AC055720.1-201ENST00000539552 TRIM37O94972 964 aa4.75□□□□□ -1.65
AC055720.1-201ENST00000539552 EOMESO95936 686 aa4.75□□□□□ -1.65
AC055720.1-201ENST00000539552 SCGB1D2O95969 90 aa4.75□□□□□ -1.65
AC055720.1-201ENST00000539552 IMPDH2P12268 514 aa4.75□□□□□ -1.65
AC055720.1-201ENST00000539552 CYP7A1P22680 504 aa4.75□□□□□ -1.65
AC055720.1-201ENST00000539552 ZNF165P49910 485 aa4.75□□□□□ -1.65
AC055720.1-201ENST00000539552 LIG3P49916 1009 aa4.75□□□□□ -1.65
AC055720.1-201ENST00000539552 RASGRF1Q13972 1273 aa4.75□□□□□ -1.65
AC055720.1-201ENST00000539552 FXNQ16595 210 aa4.75□□□□□ -1.65
AC055720.1-201ENST00000539552 SKOR2Q2VWA4 1001 aaPredicted RBP4.75□□□□□ -1.65
AC055720.1-201ENST00000539552 C2orf27AQ580R0 203 aa4.75□□□□□ -1.65
AC055720.1-201ENST00000539552 DALRD3Q5D0E6 543 aaKnown RBP4.75□□□□□ -1.65
AC055720.1-201ENST00000539552 PCNX4Q63HM2 1172 aa4.75□□□□□ -1.65
AC055720.1-201ENST00000539552 PRPF40BQ6NWY9 871 aaKnown RBP4.75□□□□□ -1.65
AC055720.1-201ENST00000539552 IRF2BP1Q8IU81 584 aa4.75□□□□□ -1.65
AC055720.1-201ENST00000539552 SULF2Q8IWU5 870 aa4.75□□□□□ -1.65
AC055720.1-201ENST00000539552 IFNL3Q8IZI9 196 aa4.75□□□□□ -1.65
AC055720.1-201ENST00000539552 MYO1HQ8N1T3 1032 aa4.75□□□□□ -1.65
AC055720.1-201ENST00000539552 OXR1Q8N573 874 aa4.75□□□□□ -1.65
AC055720.1-201ENST00000539552 PAF1Q8N7H5 531 aa4.75□□□□□ -1.65
AC055720.1-201ENST00000539552 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.75□□□□□ -1.65
AC055720.1-201ENST00000539552 CHAC2Q8WUX2 184 aa4.75□□□□□ -1.65
AC055720.1-201ENST00000539552 EAF1Q96JC9 268 aaPredicted RBP4.75□□□□□ -1.65
AC055720.1-201ENST00000539552 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.75□□□□□ -1.65
AC055720.1-201ENST00000539552 ZHX3Q9H4I2 956 aa4.75□□□□□ -1.65
AC055720.1-201ENST00000539552 ABCB6Q9NP58 842 aa4.75□□□□□ -1.65
AC055720.1-201ENST00000539552 MCM8Q9UJA3 840 aa4.75□□□□□ -1.65
AC055720.1-201ENST00000539552 LZTS1Q9Y250 596 aa4.75□□□□□ -1.65
AC055720.1-201ENST00000539552 MROH2AA6NES4 1674 aa4.75□□□□□ -1.65
AC055720.1-201ENST00000539552 PKD1L2Q7Z442 2459 aa4.75□□□□□ -1.65
AC055720.1-201ENST00000539552 AFF2P51816 1311 aa4.74□□□□□ -1.65
AC055720.1-201ENST00000539552 BRWD3Q6RI45 1802 aa4.74□□□□□ -1.65
AC055720.1-201ENST00000539552 CCDC163A0A0D9SF12 145 aa4.74□□□□□ -1.65
AC055720.1-201ENST00000539552 SHTN1A0MZ66 631 aa4.74□□□□□ -1.65
AC055720.1-201ENST00000539552 TBX3O15119 743 aa4.74□□□□□ -1.65
AC055720.1-201ENST00000539552 NPHP1O15259 732 aa4.74□□□□□ -1.65
AC055720.1-201ENST00000539552 FANCGO15287 622 aa4.74□□□□□ -1.65
AC055720.1-201ENST00000539552 EPB41L2O43491 1005 aaKnown RBP4.74□□□□□ -1.65
AC055720.1-201ENST00000539552 TIMM44O43615 452 aa4.74□□□□□ -1.65
AC055720.1-201ENST00000539552 PEX10O60683 326 aa4.74□□□□□ -1.65
AC055720.1-201ENST00000539552 LRIG2O94898 1065 aa4.74□□□□□ -1.65
AC055720.1-201ENST00000539552 CALRP27797 417 aaKnown RBP4.74□□□□□ -1.65
AC055720.1-201ENST00000539552 PDE6BP35913 854 aa4.74□□□□□ -1.65
AC055720.1-201ENST00000539552 RBM6P78332 1123 aaKnown RBP4.74□□□□□ -1.65
AC055720.1-201ENST00000539552 LMNB2Q03252 620 aa4.74□□□□□ -1.65
AC055720.1-201ENST00000539552 MCL1Q07820 350 aa4.74□□□□□ -1.65
AC055720.1-201ENST00000539552 CAMK2GQ13555 558 aaPredicted RBP4.74□□□□□ -1.65
AC055720.1-201ENST00000539552 LRRC41Q15345 812 aa4.74□□□□□ -1.65
AC055720.1-201ENST00000539552 MTERF2Q49AM1 385 aa4.74□□□□□ -1.65
AC055720.1-201ENST00000539552 SEZ6Q53EL9 994 aa4.74□□□□□ -1.65
AC055720.1-201ENST00000539552 INO80DQ53TQ3 878 aaPredicted RBP4.74□□□□□ -1.65
AC055720.1-201ENST00000539552 TTBK2Q6IQ55 1244 aa4.74□□□□□ -1.65
AC055720.1-201ENST00000539552 CCDC174Q6PII3 467 aa4.74□□□□□ -1.65
AC055720.1-201ENST00000539552 ARMCX6Q7L4S7 300 aa4.74□□□□□ -1.65
AC055720.1-201ENST00000539552 DDX42Q86XP3 938 aaKnown RBP eCLIP4.74□□□□□ -1.65
AC055720.1-201ENST00000539552 SDR16C5Q8N3Y7 309 aa4.74□□□□□ -1.65
AC055720.1-201ENST00000539552 PDILTQ8N807 584 aa4.74□□□□□ -1.65
AC055720.1-201ENST00000539552 JMYQ8N9B5 988 aa4.74□□□□□ -1.65
AC055720.1-201ENST00000539552 ANKRD24Q8TF21 1146 aa4.74□□□□□ -1.65
AC055720.1-201ENST00000539552 THAP3Q8WTV1 239 aaPredicted RBP4.74□□□□□ -1.65
AC055720.1-201ENST00000539552 MCOLN1Q9GZU1 580 aa4.74□□□□□ -1.65
AC055720.1-201ENST00000539552 MIR1-1HGQ9H1L0 117 aa4.74□□□□□ -1.65
AC055720.1-201ENST00000539552 ZNF69Q9UC07 566 aa4.74□□□□□ -1.65
AC055720.1-201ENST00000539552 DNMT1P26358 1616 aaKnown RBP4.74□□□□□ -1.65
AC055720.1-201ENST00000539552 TNIKQ9UKE5 1360 aa4.74□□□□□ -1.65
AC055720.1-201ENST00000539552 UNC13BO14795 1591 aa4.74□□□□□ -1.65
AC055720.1-201ENST00000539552 ERICH3Q5RHP9 1530 aa4.73□□□□□ -1.65
AC055720.1-201ENST00000539552 DNAJC25-GNG10A0A024R161 153 aa4.73□□□□□ -1.65
AC055720.1-201ENST00000539552 SMAD7O15105 426 aaKnown RBP4.73□□□□□ -1.65
AC055720.1-201ENST00000539552 PDPK1O15530 556 aa4.73□□□□□ -1.65
AC055720.1-201ENST00000539552 TRIM13O60858 407 aa4.73□□□□□ -1.65
AC055720.1-201ENST00000539552 FBXO24O75426 580 aa4.73□□□□□ -1.65
AC055720.1-201ENST00000539552 RASGRP1O95267 797 aa4.73□□□□□ -1.65
AC055720.1-201ENST00000539552 CBX7O95931 251 aa4.73□□□□□ -1.65
AC055720.1-201ENST00000539552 PF4P02776 101 aa4.73□□□□□ -1.65
AC055720.1-201ENST00000539552 FAM163BP0C2L3 166 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms