RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 TXNP10599 105 aaKnown RBP9.93□□□□□ -0.82
GGA3-202ENST00000538886 STXBP2Q15833 593 aa9.93□□□□□ -0.82
GGA3-202ENST00000538886 GJC2Q5T442 439 aaPredicted RBP9.93□□□□□ -0.82
GGA3-202ENST00000538886 GJA10Q969M2 543 aa9.93□□□□□ -0.82
GGA3-202ENST00000538886 GMCL1Q96IK5 515 aa9.93□□□□□ -0.82
GGA3-202ENST00000538886 TMX1Q9H3N1 280 aa9.93□□□□□ -0.82
GGA3-202ENST00000538886 AZI2Q9H6S1 392 aa9.93□□□□□ -0.82
GGA3-202ENST00000538886 CCDC39Q9UFE4 941 aa9.93□□□□□ -0.82
GGA3-202ENST00000538886 KCNH4Q9UQ05 1017 aa9.93□□□□□ -0.82
GGA3-202ENST00000538886 MYL3P08590 195 aa9.93□□□□□ -0.82
GGA3-202ENST00000538886 SYT1P21579 422 aa9.93□□□□□ -0.82
GGA3-202ENST00000538886 RAD51AP2Q09MP3 1159 aa9.93□□□□□ -0.82
GGA3-202ENST00000538886 TMEM266Q2M3C6 531 aa9.93□□□□□ -0.82
GGA3-202ENST00000538886 SGMS1Q86VZ5 419 aa9.93□□□□□ -0.82
GGA3-202ENST00000538886 DEFB118Q96PH6 123 aa9.93□□□□□ -0.82
GGA3-202ENST00000538886 RNF26Q9BY78 433 aaPredicted RBP9.93□□□□□ -0.82
GGA3-202ENST00000538886 PCDHA6Q9UN73 950 aa9.93□□□□□ -0.82
GGA3-202ENST00000538886 PCDHA8Q9Y5H6 950 aa9.93□□□□□ -0.82
GGA3-202ENST00000538886 CSPG5O95196 566 aa9.92□□□□□ -0.82
GGA3-202ENST00000538886 ICAM1P05362 532 aa9.92□□□□□ -0.82
GGA3-202ENST00000538886 TXLNAP40222 546 aa9.92□□□□□ -0.82
GGA3-202ENST00000538886 NSUN7Q8NE18 718 aaKnown RBP9.92□□□□□ -0.82
GGA3-202ENST00000538886 GMCL1P1Q8NEA9 526 aa9.92□□□□□ -0.82
GGA3-202ENST00000538886 CHAMP1Q96JM3 812 aa9.92□□□□□ -0.82
GGA3-202ENST00000538886 ZNF396Q96N95 335 aaPredicted RBP9.92□□□□□ -0.82
GGA3-202ENST00000538886 SH2D3AQ9BRG2 576 aa9.92□□□□□ -0.82
GGA3-202ENST00000538886 A1CFQ9NQ94 594 aaKnown RBP9.92□□□□□ -0.82
GGA3-202ENST00000538886 TRPC6Q9Y210 931 aa9.92□□□□□ -0.82
GGA3-202ENST00000538886 PDE4DIPQ5VU43 2346 aa9.92□□□□□ -0.82
GGA3-202ENST00000538886 VWA3AA6NCI4 1184 aa9.92□□□□□ -0.82
GGA3-202ENST00000538886 GAS7O60861 476 aa9.92□□□□□ -0.82
GGA3-202ENST00000538886 UBA7P41226 1012 aa9.92□□□□□ -0.82
GGA3-202ENST00000538886 METTL13Q8N6R0 699 aa9.92□□□□□ -0.82
GGA3-202ENST00000538886 OXER1Q8TDS5 423 aa9.92□□□□□ -0.82
GGA3-202ENST00000538886 DPF3Q92784 378 aa9.92□□□□□ -0.82
GGA3-202ENST00000538886 MS4A4AQ96JQ5 239 aa9.92□□□□□ -0.82
GGA3-202ENST00000538886 SUGCTQ9HAC7 445 aa9.92□□□□□ -0.82
GGA3-202ENST00000538886 TCP11L1Q9NUJ3 509 aa9.92□□□□□ -0.82
GGA3-202ENST00000538886 PASKQ96RG2 1323 aa9.92□□□□□ -0.82
GGA3-202ENST00000538886 CYTH3O43739 400 aa9.92□□□□□ -0.82
GGA3-202ENST00000538886 CCL14Q16627 93 aa9.92□□□□□ -0.82
GGA3-202ENST00000538886 FAM110CQ1W6H9 321 aa9.92□□□□□ -0.82
GGA3-202ENST00000538886 NOL9Q5SY16 702 aaKnown RBP9.92□□□□□ -0.82
GGA3-202ENST00000538886 TNPO1Q92973 898 aaKnown RBP9.92□□□□□ -0.82
GGA3-202ENST00000538886 SPATA32Q96LK8 384 aa9.92□□□□□ -0.82
GGA3-202ENST00000538886 MROH8Q9H579 483 aa9.92□□□□□ -0.82
GGA3-202ENST00000538886 ZKSCAN5Q9Y2L8 839 aa9.92□□□□□ -0.82
GGA3-202ENST00000538886 PGK1P00558 417 aa9.91□□□□□ -0.82
GGA3-202ENST00000538886 NR3C2P08235 984 aa9.91□□□□□ -0.82
GGA3-202ENST00000538886 PRKAR2AP13861 404 aaKnown RBP9.91□□□□□ -0.82
GGA3-202ENST00000538886 GRK4P32298 578 aa9.91□□□□□ -0.82
GGA3-202ENST00000538886 NUCB2P80303 420 aa9.91□□□□□ -0.82
GGA3-202ENST00000538886 GPATCH11Q8N954 259 aa9.91□□□□□ -0.82
GGA3-202ENST00000538886 RGS22Q8NE09 1264 aa9.91□□□□□ -0.82
GGA3-202ENST00000538886 ZNF668Q96K58 619 aaPredicted RBP9.91□□□□□ -0.82
GGA3-202ENST00000538886 TRIM47Q96LD4 638 aa9.91□□□□□ -0.82
GGA3-202ENST00000538886 SDF4Q9BRK5 362 aa9.91□□□□□ -0.82
GGA3-202ENST00000538886 ANO3Q9BYT9 981 aa9.91□□□□□ -0.82
GGA3-202ENST00000538886 SLC38A10Q9HBR0 1119 aa9.91□□□□□ -0.82
GGA3-202ENST00000538886 PALM3A6NDB9 673 aaPredicted RBP9.91□□□□□ -0.82
GGA3-202ENST00000538886 TNNT1P13805 278 aa9.91□□□□□ -0.82
GGA3-202ENST00000538886 IDEP14735 1019 aa9.91□□□□□ -0.82
GGA3-202ENST00000538886 CDC25AP30304 524 aa9.91□□□□□ -0.82
GGA3-202ENST00000538886 SOX10P56693 466 aa9.91□□□□□ -0.82
GGA3-202ENST00000538886 LACTBP83111 547 aaPredicted RBP9.91□□□□□ -0.82
GGA3-202ENST00000538886 GABRQQ9UN88 632 aa9.91□□□□□ -0.82
GGA3-202ENST00000538886 LBX2Q6XYB7 198 aa9.91□□□□□ -0.82
GGA3-202ENST00000538886 TPH2Q8IWU9 490 aa9.91□□□□□ -0.82
GGA3-202ENST00000538886 MKL1Q969V6 931 aa9.91□□□□□ -0.82
GGA3-202ENST00000538886 LENG1Q96BZ8 264 aaPredicted RBP9.91□□□□□ -0.82
GGA3-202ENST00000538886 ZNF577Q9BSK1 485 aa9.91□□□□□ -0.82
GGA3-202ENST00000538886 PRPF3O43395 683 aaKnown RBP9.9□□□□□ -0.82
GGA3-202ENST00000538886 MATR3P43243 847 aaKnown RBP eCLIP9.9□□□□□ -0.82
GGA3-202ENST00000538886 KRT85P78386 507 aa9.9□□□□□ -0.82
GGA3-202ENST00000538886 PRKAG2Q9UGJ0 569 aa9.9□□□□□ -0.82
GGA3-202ENST00000538886 PRPF40AO75400 957 aaKnown RBP9.9□□□□□ -0.82
GGA3-202ENST00000538886 FDX1P10109 184 aa9.9□□□□□ -0.82
GGA3-202ENST00000538886 RARBP10826 455 aa9.9□□□□□ -0.82
GGA3-202ENST00000538886 CCND2P30279 289 aa9.9□□□□□ -0.82
GGA3-202ENST00000538886 TECP42680 631 aa9.9□□□□□ -0.82
GGA3-202ENST00000538886 MTMR1Q13613 665 aa9.9□□□□□ -0.82
GGA3-202ENST00000538886 PFKFB3Q16875 520 aaPredicted RBP9.9□□□□□ -0.82
GGA3-202ENST00000538886 TSGA10IPQ3SY00 556 aa9.9□□□□□ -0.82
GGA3-202ENST00000538886 CYFIP1Q7L576 1253 aa9.9□□□□□ -0.82
GGA3-202ENST00000538886 HMX1Q9NP08 348 aaPredicted RBP9.9□□□□□ -0.82
GGA3-202ENST00000538886 PTCH2Q9Y6C5 1203 aa9.9□□□□□ -0.82
GGA3-202ENST00000538886 SNED1Q8TER0 1413 aa9.9□□□□□ -0.83
GGA3-202ENST00000538886 KRT25Q7Z3Z0 450 aa9.9□□□□□ -0.83
GGA3-202ENST00000538886 CHST13Q8NET6 341 aa9.9□□□□□ -0.83
GGA3-202ENST00000538886 RAB34Q9BZG1 259 aa9.9□□□□□ -0.83
GGA3-202ENST00000538886 DDX25Q9UHL0 483 aaKnown RBP9.9□□□□□ -0.83
GGA3-202ENST00000538886 LAMB2P55268 1798 aa9.9□□□□□ -0.83
GGA3-202ENST00000538886 BAZ2AQ9UIF9 1905 aaKnown RBP9.89□□□□□ -0.83
GGA3-202ENST00000538886 FAM205CA6NFA0 338 aa9.89□□□□□ -0.83
GGA3-202ENST00000538886 ASB14A6NK59 587 aa9.89□□□□□ -0.83
GGA3-202ENST00000538886 PES1O00541 588 aaKnown RBP9.89□□□□□ -0.83
GGA3-202ENST00000538886 EPB41L2O43491 1005 aaKnown RBP9.89□□□□□ -0.83
GGA3-202ENST00000538886 FAM193AP78312 1265 aa9.89□□□□□ -0.83
GGA3-202ENST00000538886 DNM1Q05193 864 aaKnown RBP9.89□□□□□ -0.83
GGA3-202ENST00000538886 MAP3K11Q16584 847 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms