RNA–Protein interactions for RNA: ENST00000537597.1

SRRM4-202, Transcript of serine/arginine repetitive matrix 4, humanhuman

TSL 4

Gene SRRM4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-202ENST00000537597 TMEM63BQ5T3F8 832 aa17.47■□□□□ 0.39
SRRM4-202ENST00000537597 PPP1R18Q6NYC8 613 aa17.47■□□□□ 0.39
SRRM4-202ENST00000537597 KLHDC9Q8NEP7 349 aa17.47■□□□□ 0.39
SRRM4-202ENST00000537597 NSUN6Q8TEA1 469 aaKnown RBP17.47■□□□□ 0.39
SRRM4-202ENST00000537597 PHKBQ93100 1093 aa17.47■□□□□ 0.39
SRRM4-202ENST00000537597 RMDN3Q96TC7 470 aa17.47■□□□□ 0.39
SRRM4-202ENST00000537597 PDCD2LQ9BRP1 358 aa17.47■□□□□ 0.39
SRRM4-202ENST00000537597 VTA1Q9NP79 307 aa17.47■□□□□ 0.39
SRRM4-202ENST00000537597 PDGFCQ9NRA1 345 aa17.47■□□□□ 0.39
SRRM4-202ENST00000537597 SEC63Q9UGP8 760 aaKnown RBP17.47■□□□□ 0.39
SRRM4-202ENST00000537597 FRMPD3Q5JV73 1810 aa17.47■□□□□ 0.39
SRRM4-202ENST00000537597 ESYT2A0FGR8 921 aa17.46■□□□□ 0.39
SRRM4-202ENST00000537597 ADAMTS4O75173 837 aa17.46■□□□□ 0.39
SRRM4-202ENST00000537597 SCG2P13521 617 aa17.46■□□□□ 0.39
SRRM4-202ENST00000537597 FDPSP14324 419 aaKnown RBP17.46■□□□□ 0.39
SRRM4-202ENST00000537597 HOXA13P31271 388 aaPredicted RBP17.46■□□□□ 0.39
SRRM4-202ENST00000537597 CCDC144BQ3MJ40 725 aa17.46■□□□□ 0.39
SRRM4-202ENST00000537597 IQSEC1Q6DN90 963 aa17.46■□□□□ 0.39
SRRM4-202ENST00000537597 CCDC62Q6P9F0 684 aa17.46■□□□□ 0.39
SRRM4-202ENST00000537597 USP17L6PQ6QN14 398 aa17.46■□□□□ 0.39
SRRM4-202ENST00000537597 GPKOWQ92917 476 aaPredicted RBP eCLIP17.46■□□□□ 0.39
SRRM4-202ENST00000537597 ZMYND12Q9H0C1 365 aa17.46■□□□□ 0.39
SRRM4-202ENST00000537597 UPF3AQ9H1J1 476 aaKnown RBP17.46■□□□□ 0.39
SRRM4-202ENST00000537597 RIC8AQ9NPQ8 531 aa17.46■□□□□ 0.39
SRRM4-202ENST00000537597 RBM27Q9P2N5 1060 aaKnown RBP17.46■□□□□ 0.39
SRRM4-202ENST00000537597 FAM184BQ9ULE4 1060 aa17.46■□□□□ 0.39
SRRM4-202ENST00000537597 CNPY2Q9Y2B0 182 aa17.46■□□□□ 0.39
SRRM4-202ENST00000537597 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.45■□□□□ 0.38
SRRM4-202ENST00000537597 DUSP11O75319 330 aaKnown RBP17.45■□□□□ 0.38
SRRM4-202ENST00000537597 NR3C2P08235 984 aa17.45■□□□□ 0.38
SRRM4-202ENST00000537597 AKR1A1P14550 325 aa17.45■□□□□ 0.38
SRRM4-202ENST00000537597 NPY5RQ15761 445 aa17.45■□□□□ 0.38
SRRM4-202ENST00000537597 CRYGNQ8WXF5 182 aa17.45■□□□□ 0.38
SRRM4-202ENST00000537597 GTF3C6Q969F1 213 aa17.45■□□□□ 0.38
SRRM4-202ENST00000537597 PSTPIP2Q9H939 334 aa17.45■□□□□ 0.38
SRRM4-202ENST00000537597 Q9Y3F1 56 aa17.45■□□□□ 0.38
SRRM4-202ENST00000537597 EDIL3O43854 480 aa17.44■□□□□ 0.38
SRRM4-202ENST00000537597 TFRCP02786 760 aaKnown RBP17.44■□□□□ 0.38
SRRM4-202ENST00000537597 SMPD1P17405 629 aa17.44■□□□□ 0.38
SRRM4-202ENST00000537597 GJA9P57773 515 aa17.44■□□□□ 0.38
SRRM4-202ENST00000537597 MRPS9P82933 396 aaKnown RBP17.44■□□□□ 0.38
SRRM4-202ENST00000537597 PGM5Q15124 567 aa17.44■□□□□ 0.38
SRRM4-202ENST00000537597 RABEP1Q15276 862 aa17.44■□□□□ 0.38
SRRM4-202ENST00000537597 FAM177A1Q8N128 213 aaPredicted RBP17.44■□□□□ 0.38
SRRM4-202ENST00000537597 IL31RAQ8NI17 732 aa17.44■□□□□ 0.38
SRRM4-202ENST00000537597 SH3GLB2Q9NR46 395 aa17.44■□□□□ 0.38
SRRM4-202ENST00000537597 LIMCH1Q9UPQ0 1083 aa17.44■□□□□ 0.38
SRRM4-202ENST00000537597 STK36Q9NRP7 1315 aa17.44■□□□□ 0.38
SRRM4-202ENST00000537597 M0R2N6 131 aa17.43■□□□□ 0.38
SRRM4-202ENST00000537597 EIF3JO75822 258 aaKnown RBP17.43■□□□□ 0.38
SRRM4-202ENST00000537597 CST5P28325 142 aaPredicted RBP17.43■□□□□ 0.38
SRRM4-202ENST00000537597 ADCYAP1R1P41586 468 aa17.43■□□□□ 0.38
SRRM4-202ENST00000537597 STK3Q13188 491 aa17.43■□□□□ 0.38
SRRM4-202ENST00000537597 DUSP28Q4G0W2 176 aa17.43■□□□□ 0.38
SRRM4-202ENST00000537597 HEATR3Q7Z4Q2 680 aa17.43■□□□□ 0.38
SRRM4-202ENST00000537597 SLKQ9H2G2 1235 aaPredicted RBP17.43■□□□□ 0.38
SRRM4-202ENST00000537597 NAP1L2Q9ULW6 460 aaPredicted RBP17.43■□□□□ 0.38
SRRM4-202ENST00000537597 SMCO2A6NFE2 343 aa17.42■□□□□ 0.38
SRRM4-202ENST00000537597 CAPN15O75808 1086 aa17.42■□□□□ 0.38
SRRM4-202ENST00000537597 ARIH2O95376 493 aa17.42■□□□□ 0.38
SRRM4-202ENST00000537597 CD2BP2O95400 341 aaKnown RBP17.42■□□□□ 0.38
SRRM4-202ENST00000537597 LRRC41Q15345 812 aa17.42■□□□□ 0.38
SRRM4-202ENST00000537597 STXBP2Q15833 593 aa17.42■□□□□ 0.38
SRRM4-202ENST00000537597 FBXO16Q8IX29 292 aaPredicted RBP17.42■□□□□ 0.38
SRRM4-202ENST00000537597 NECAB1Q8N987 351 aa17.42■□□□□ 0.38
SRRM4-202ENST00000537597 NSUN7Q8NE18 718 aaKnown RBP17.42■□□□□ 0.38
SRRM4-202ENST00000537597 SMARCC2Q8TAQ2 1214 aa17.42■□□□□ 0.38
SRRM4-202ENST00000537597 DIS3LQ8TF46 1054 aaKnown RBP17.42■□□□□ 0.38
SRRM4-202ENST00000537597 LENG1Q96BZ8 264 aaPredicted RBP17.42■□□□□ 0.38
SRRM4-202ENST00000537597 SLC26A6Q9BXS9 759 aa17.42■□□□□ 0.38
SRRM4-202ENST00000537597 DNAH12Q6ZR08 3092 aa17.42■□□□□ 0.38
SRRM4-202ENST00000537597 DNM1LO00429 736 aa17.41■□□□□ 0.38
SRRM4-202ENST00000537597 PPFIA3O75145 1194 aa17.41■□□□□ 0.38
SRRM4-202ENST00000537597 DEXIO95424 95 aa17.41■□□□□ 0.38
SRRM4-202ENST00000537597 EIF2AK2P19525 551 aaKnown RBP17.41■□□□□ 0.38
SRRM4-202ENST00000537597 PTGS1P23219 599 aa17.41■□□□□ 0.38
SRRM4-202ENST00000537597 CNGA1P29973 690 aa17.41■□□□□ 0.38
SRRM4-202ENST00000537597 ICAM3P32942 547 aa17.41■□□□□ 0.38
SRRM4-202ENST00000537597 MRPL12P52815 198 aaKnown RBP17.41■□□□□ 0.38
SRRM4-202ENST00000537597 IRX5P78411 483 aaPredicted RBP17.41■□□□□ 0.38
SRRM4-202ENST00000537597 TNFAIP2Q03169 654 aa17.41■□□□□ 0.38
SRRM4-202ENST00000537597 SSRP1Q08945 709 aaKnown RBP17.41■□□□□ 0.38
SRRM4-202ENST00000537597 UBE2SQ16763 222 aa17.41■□□□□ 0.38
SRRM4-202ENST00000537597 ARHGEF16Q5VV41 709 aa17.41■□□□□ 0.38
SRRM4-202ENST00000537597 ANO1Q5XXA6 986 aa17.41■□□□□ 0.38
SRRM4-202ENST00000537597 XRRA1Q6P2D8 792 aa17.41■□□□□ 0.38
SRRM4-202ENST00000537597 INPP4AQ96PE3 977 aaPredicted RBP17.41■□□□□ 0.38
SRRM4-202ENST00000537597 ZHX1Q9UKY1 873 aaPredicted RBP17.41■□□□□ 0.38
SRRM4-202ENST00000537597 SYNRGQ9UMZ2 1314 aa17.41■□□□□ 0.38
SRRM4-202ENST00000537597 KIAA1217Q5T5P2 1943 aa17.41■□□□□ 0.38
SRRM4-202ENST00000537597 B4DLN1 442 aa17.4■□□□□ 0.38
SRRM4-202ENST00000537597 RARBP10826 455 aa17.4■□□□□ 0.38
SRRM4-202ENST00000537597 NAPAP54920 295 aa17.4■□□□□ 0.38
SRRM4-202ENST00000537597 PDE4DQ08499 809 aa17.4■□□□□ 0.38
SRRM4-202ENST00000537597 SEMA3FQ13275 785 aa17.4■□□□□ 0.38
SRRM4-202ENST00000537597 PCNX4Q63HM2 1172 aa17.4■□□□□ 0.38
SRRM4-202ENST00000537597 EEPD1Q7L9B9 569 aa17.4■□□□□ 0.38
SRRM4-202ENST00000537597 FCHSD1Q86WN1 690 aa17.4■□□□□ 0.38
SRRM4-202ENST00000537597 ARRDC4Q8NCT1 418 aa17.4■□□□□ 0.38
SRRM4-202ENST00000537597 CUL5Q93034 780 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 172.7 ms