RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 LINC00116Q8NCU8 138 aa17.28■□□□□ 0.36
CHFR-213ENST00000536843 RASSF8Q8NHQ8 419 aa17.28■□□□□ 0.36
CHFR-213ENST00000536843 RSRC1Q96IZ7 334 aaKnown RBP17.28■□□□□ 0.36
CHFR-213ENST00000536843 GJD4Q96KN9 370 aaPredicted RBP17.28■□□□□ 0.36
CHFR-213ENST00000536843 TTYH3Q9C0H2 523 aa17.28■□□□□ 0.36
CHFR-213ENST00000536843 ABCF2Q9UG63 623 aa17.28■□□□□ 0.36
CHFR-213ENST00000536843 PDS5AQ29RF7 1337 aaKnown RBP17.27■□□□□ 0.36
CHFR-213ENST00000536843 GMNCA6NCL1 334 aa17.27■□□□□ 0.36
CHFR-213ENST00000536843 H7C1D1 291 aa17.27■□□□□ 0.36
CHFR-213ENST00000536843 SSBP05455 408 aaKnown RBP eCLIP17.27■□□□□ 0.36
CHFR-213ENST00000536843 PARP1P09874 1014 aaKnown RBP17.27■□□□□ 0.36
CHFR-213ENST00000536843 SCTRP47872 440 aa17.27■□□□□ 0.36
CHFR-213ENST00000536843 CDK17Q00537 523 aa17.27■□□□□ 0.36
CHFR-213ENST00000536843 ZNHIT6Q9NWK9 470 aaKnown RBP17.27■□□□□ 0.36
CHFR-213ENST00000536843 XDHP47989 1333 aa17.27■□□□□ 0.35
CHFR-213ENST00000536843 FRMD3A2A2Y4 597 aa17.27■□□□□ 0.35
CHFR-213ENST00000536843 C5orf60A6NFR6 353 aa17.27■□□□□ 0.35
CHFR-213ENST00000536843 DNAJC8O75937 253 aaPredicted RBP17.27■□□□□ 0.35
CHFR-213ENST00000536843 MRPS25P82663 173 aaKnown RBP17.27■□□□□ 0.35
CHFR-213ENST00000536843 TRPC5Q9UL62 973 aaPredicted RBP17.27■□□□□ 0.35
CHFR-213ENST00000536843 THSD7AQ9UPZ6 1657 aa17.26■□□□□ 0.35
CHFR-213ENST00000536843 MATR3P43243 847 aaKnown RBP eCLIP17.26■□□□□ 0.35
CHFR-213ENST00000536843 GRIPAP1Q4V328 841 aa17.26■□□□□ 0.35
CHFR-213ENST00000536843 BICDL1Q6ZP65 573 aa17.26■□□□□ 0.35
CHFR-213ENST00000536843 FERMT2Q96AC1 680 aa17.26■□□□□ 0.35
CHFR-213ENST00000536843 TRIM75PA6NK02 468 aa17.26■□□□□ 0.35
CHFR-213ENST00000536843 TRAPPC3O43617 180 aa17.26■□□□□ 0.35
CHFR-213ENST00000536843 FAM153BP0C7A2 387 aa17.26■□□□□ 0.35
CHFR-213ENST00000536843 GHRP10912 638 aa17.26■□□□□ 0.35
CHFR-213ENST00000536843 EEF1GP26641 437 aaKnown RBP17.26■□□□□ 0.35
CHFR-213ENST00000536843 WTAPQ15007 396 aa17.26■□□□□ 0.35
CHFR-213ENST00000536843 FAM153CQ494X1 144 aa17.26■□□□□ 0.35
CHFR-213ENST00000536843 CCDC181Q5TID7 509 aa17.26■□□□□ 0.35
CHFR-213ENST00000536843 ZNF658Q5TYW1 1059 aaPredicted RBP17.26■□□□□ 0.35
CHFR-213ENST00000536843 CLEC4GQ6UXB4 293 aa17.26■□□□□ 0.35
CHFR-213ENST00000536843 ARMC9Q7Z3E5 817 aa17.26■□□□□ 0.35
CHFR-213ENST00000536843 TRIM22Q8IYM9 498 aa17.26■□□□□ 0.35
CHFR-213ENST00000536843 RETREG2Q8NC44 543 aa17.26■□□□□ 0.35
CHFR-213ENST00000536843 SDR42E1Q8WUS8 393 aa17.26■□□□□ 0.35
CHFR-213ENST00000536843 SH2D4AQ9H788 454 aa17.26■□□□□ 0.35
CHFR-213ENST00000536843 EBF2Q9HAK2 575 aa17.26■□□□□ 0.35
CHFR-213ENST00000536843 VPS54Q9P1Q0 977 aa17.26■□□□□ 0.35
CHFR-213ENST00000536843 FAM153AQ9UHL3 310 aa17.26■□□□□ 0.35
CHFR-213ENST00000536843 CAPN6Q9Y6Q1 641 aa17.26■□□□□ 0.35
CHFR-213ENST00000536843 PAFAH1B1P43034 410 aa17.25■□□□□ 0.35
CHFR-213ENST00000536843 NUP58Q9BVL2 599 aa17.25■□□□□ 0.35
CHFR-213ENST00000536843 PPANQ9NQ55 473 aaKnown RBP17.25■□□□□ 0.35
CHFR-213ENST00000536843 ZNF804BA4D1E1 1349 aa17.25■□□□□ 0.35
CHFR-213ENST00000536843 MAGEB6P1A0A0J9YX57 407 aa17.25■□□□□ 0.35
CHFR-213ENST00000536843 MINDY4BA8MYZ0 360 aa17.25■□□□□ 0.35
CHFR-213ENST00000536843 SMIM22K7EJ46 135 aa17.25■□□□□ 0.35
CHFR-213ENST00000536843 USO1O60763 962 aaKnown RBP17.25■□□□□ 0.35
CHFR-213ENST00000536843 CARSP49589 748 aaKnown RBP17.25■□□□□ 0.35
CHFR-213ENST00000536843 ZBED6P86452 979 aa17.25■□□□□ 0.35
CHFR-213ENST00000536843 SF3B3Q15393 1217 aaKnown RBP17.25■□□□□ 0.35
CHFR-213ENST00000536843 CDCA2Q69YH5 1023 aaPredicted RBP17.25■□□□□ 0.35
CHFR-213ENST00000536843 CCDC155Q8N6L0 562 aa17.25■□□□□ 0.35
CHFR-213ENST00000536843 WHAMMQ8TF30 809 aa17.25■□□□□ 0.35
CHFR-213ENST00000536843 SH3GL3Q99963 347 aa17.25■□□□□ 0.35
CHFR-213ENST00000536843 TMBIM4Q9HC24 238 aa17.25■□□□□ 0.35
CHFR-213ENST00000536843 CABP5Q9NP86 173 aa17.25■□□□□ 0.35
CHFR-213ENST00000536843 SPATS2LQ9NUQ6 558 aaKnown RBP17.25■□□□□ 0.35
CHFR-213ENST00000536843 SLC12A6Q9UHW9 1150 aa17.25■□□□□ 0.35
CHFR-213ENST00000536843 NFU1Q9UMS0 254 aa17.25■□□□□ 0.35
CHFR-213ENST00000536843 LEMD3Q9Y2U8 911 aa17.25■□□□□ 0.35
CHFR-213ENST00000536843 TIAM2Q8IVF5 1701 aa17.24■□□□□ 0.35
CHFR-213ENST00000536843 DEXIO95424 95 aa17.24■□□□□ 0.35
CHFR-213ENST00000536843 ATP6V1G2O95670 118 aa17.24■□□□□ 0.35
CHFR-213ENST00000536843 SRGNP10124 158 aa17.24■□□□□ 0.35
CHFR-213ENST00000536843 DNM2P50570 870 aa17.24■□□□□ 0.35
CHFR-213ENST00000536843 CYP27A1Q02318 531 aa17.24■□□□□ 0.35
CHFR-213ENST00000536843 ADCY2Q08462 1091 aa17.24■□□□□ 0.35
CHFR-213ENST00000536843 RTN1Q16799 776 aa17.24■□□□□ 0.35
CHFR-213ENST00000536843 NFRKBQ6P4R8 1299 aa17.24■□□□□ 0.35
CHFR-213ENST00000536843 CRELD2Q6UXH1 353 aaPredicted RBP17.24■□□□□ 0.35
CHFR-213ENST00000536843 CMTR1Q8N1G2 835 aaKnown RBP17.24■□□□□ 0.35
CHFR-213ENST00000536843 OXER1Q8TDS5 423 aa17.24■□□□□ 0.35
CHFR-213ENST00000536843 SEC16BQ96JE7 1060 aa17.24■□□□□ 0.35
CHFR-213ENST00000536843 RBM12Q9NTZ6 932 aaKnown RBP17.24■□□□□ 0.35
CHFR-213ENST00000536843 RMND1Q9NWS8 449 aa17.24■□□□□ 0.35
CHFR-213ENST00000536843 LRWD1Q9UFC0 647 aa17.24■□□□□ 0.35
CHFR-213ENST00000536843 MINPP1Q9UNW1 487 aa17.24■□□□□ 0.35
CHFR-213ENST00000536843 ZNF263O14978 683 aa17.23■□□□□ 0.35
CHFR-213ENST00000536843 GTPBP6O43824 516 aaPredicted RBP17.23■□□□□ 0.35
CHFR-213ENST00000536843 PPP1R12BO60237 982 aaPredicted RBP17.23■□□□□ 0.35
CHFR-213ENST00000536843 ONECUT3O60422 494 aaPredicted RBP17.23■□□□□ 0.35
CHFR-213ENST00000536843 BMP15O95972 392 aa17.23■□□□□ 0.35
CHFR-213ENST00000536843 GLI1P08151 1106 aa17.23■□□□□ 0.35
CHFR-213ENST00000536843 GCKP35557 465 aa17.23■□□□□ 0.35
CHFR-213ENST00000536843 BYSLQ13895 437 aaKnown RBP17.23■□□□□ 0.35
CHFR-213ENST00000536843 LRIG3Q6UXM1 1119 aa17.23■□□□□ 0.35
CHFR-213ENST00000536843 CCDC82Q8N4S0 544 aa17.23■□□□□ 0.35
CHFR-213ENST00000536843 SMCR8Q8TEV9 937 aaPredicted RBP17.23■□□□□ 0.35
CHFR-213ENST00000536843 TATDN2Q93075 761 aa17.23■□□□□ 0.35
CHFR-213ENST00000536843 KDM4CQ9H3R0 1056 aa17.23■□□□□ 0.35
CHFR-213ENST00000536843 AGPAT5Q9NUQ2 364 aa17.23■□□□□ 0.35
CHFR-213ENST00000536843 BSDC1Q9NW68 430 aaPredicted RBP17.23■□□□□ 0.35
CHFR-213ENST00000536843 OPLAHO14841 1288 aa17.23■□□□□ 0.35
CHFR-213ENST00000536843 RPSAP08865 295 aaKnown RBP17.23■□□□□ 0.35
CHFR-213ENST00000536843 ELF3P78545 371 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms