RNA–Protein interactions for RNA: ENST00000536411.1

SCNN1A-209, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 2

Gene SCNN1A, Length 593 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-209ENST00000536411 TRIM60Q495X7 471 aa16.43■□□□□ 0.22
SCNN1A-209ENST00000536411 EEPD1Q7L9B9 569 aa16.43■□□□□ 0.22
SCNN1A-209ENST00000536411 ZNF713Q8N859 430 aaPredicted RBP16.43■□□□□ 0.22
SCNN1A-209ENST00000536411 FERMT2Q96AC1 680 aa16.43■□□□□ 0.22
SCNN1A-209ENST00000536411 PIGSQ96S52 555 aa16.43■□□□□ 0.22
SCNN1A-209ENST00000536411 RBM27Q9P2N5 1060 aaKnown RBP16.43■□□□□ 0.22
SCNN1A-209ENST00000536411 TAF6LQ9Y6J9 622 aa16.43■□□□□ 0.22
SCNN1A-209ENST00000536411 DYNC1LI2O43237 492 aaPredicted RBP16.42■□□□□ 0.22
SCNN1A-209ENST00000536411 HSPA4P34932 840 aa16.42■□□□□ 0.22
SCNN1A-209ENST00000536411 MAGEA10P43363 369 aaPredicted RBP16.42■□□□□ 0.22
SCNN1A-209ENST00000536411 TDHQ8IZJ6 230 aa16.42■□□□□ 0.22
SCNN1A-209ENST00000536411 FANCBQ8NB91 859 aa16.42■□□□□ 0.22
SCNN1A-209ENST00000536411 OR6J1Q8NGC5 347 aa16.42■□□□□ 0.22
SCNN1A-209ENST00000536411 KCNB2Q92953 911 aa16.42■□□□□ 0.22
SCNN1A-209ENST00000536411 LENG1Q96BZ8 264 aaPredicted RBP16.42■□□□□ 0.22
SCNN1A-209ENST00000536411 UBE2OQ9C0C9 1292 aaKnown RBP16.42■□□□□ 0.22
SCNN1A-209ENST00000536411 GLT8D2Q9H1C3 349 aa16.42■□□□□ 0.22
SCNN1A-209ENST00000536411 EHMT1Q9H9B1 1298 aa16.42■□□□□ 0.22
SCNN1A-209ENST00000536411 LCTP09848 1927 aa16.41■□□□□ 0.22
SCNN1A-209ENST00000536411 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.41■□□□□ 0.22
SCNN1A-209ENST00000536411 ARVCFO00192 962 aa16.41■□□□□ 0.22
SCNN1A-209ENST00000536411 SLC34A2O95436 690 aa16.41■□□□□ 0.22
SCNN1A-209ENST00000536411 SYN1P17600 705 aa16.41■□□□□ 0.22
SCNN1A-209ENST00000536411 CCND2P30279 289 aa16.41■□□□□ 0.22
SCNN1A-209ENST00000536411 GNPTABQ3T906 1256 aa16.41■□□□□ 0.22
SCNN1A-209ENST00000536411 XRRA1Q6P2D8 792 aa16.41■□□□□ 0.22
SCNN1A-209ENST00000536411 BLOC1S2Q6QNY1 142 aa16.41■□□□□ 0.22
SCNN1A-209ENST00000536411 MICU3Q86XE3 530 aa16.41■□□□□ 0.22
SCNN1A-209ENST00000536411 PRDM5Q9NQX1 630 aaPredicted RBP16.41■□□□□ 0.22
SCNN1A-209ENST00000536411 PXMP2Q9NR77 195 aa16.41■□□□□ 0.22
SCNN1A-209ENST00000536411 ZBTB43O43298 467 aa16.4■□□□□ 0.22
SCNN1A-209ENST00000536411 CYTH3O43739 400 aa16.4■□□□□ 0.22
SCNN1A-209ENST00000536411 PQBP1O60828 265 aaKnown RBP16.4■□□□□ 0.22
SCNN1A-209ENST00000536411 GH1P01241 217 aa16.4■□□□□ 0.22
SCNN1A-209ENST00000536411 NR3C2P08235 984 aa16.4■□□□□ 0.22
SCNN1A-209ENST00000536411 TXNP10599 105 aaKnown RBP16.4■□□□□ 0.22
SCNN1A-209ENST00000536411 TGFB3P10600 412 aa16.4■□□□□ 0.22
SCNN1A-209ENST00000536411 TLE2Q04725 743 aa16.4■□□□□ 0.22
SCNN1A-209ENST00000536411 PPP1R18Q6NYC8 613 aa16.4■□□□□ 0.22
SCNN1A-209ENST00000536411 APOA5Q6Q788 366 aa16.4■□□□□ 0.22
SCNN1A-209ENST00000536411 FBXL16Q8N461 479 aa16.4■□□□□ 0.22
SCNN1A-209ENST00000536411 TAAR1Q96RJ0 339 aa16.4■□□□□ 0.22
SCNN1A-209ENST00000536411 PDLIM7Q9NR12 457 aa16.4■□□□□ 0.22
SCNN1A-209ENST00000536411 CEP290O15078 2479 aa16.4■□□□□ 0.22
SCNN1A-209ENST00000536411 PIK3CDO00329 1044 aa16.39■□□□□ 0.21
SCNN1A-209ENST00000536411 KIAA0355O15063 1070 aa16.39■□□□□ 0.21
SCNN1A-209ENST00000536411 ADCY6O43306 1168 aa16.39■□□□□ 0.21
SCNN1A-209ENST00000536411 SUPT20HL2P0C7V6 817 aa16.39■□□□□ 0.21
SCNN1A-209ENST00000536411 RAG1P15918 1043 aa16.39■□□□□ 0.21
SCNN1A-209ENST00000536411 EXOSC10Q01780 885 aaKnown RBP16.39■□□□□ 0.21
SCNN1A-209ENST00000536411 RTN1Q16799 776 aa16.39■□□□□ 0.21
SCNN1A-209ENST00000536411 GPR153Q6NV75 609 aa16.39■□□□□ 0.21
SCNN1A-209ENST00000536411 TMTC3Q6ZXV5 915 aa16.39■□□□□ 0.21
SCNN1A-209ENST00000536411 SMARCC2Q8TAQ2 1214 aa16.39■□□□□ 0.21
SCNN1A-209ENST00000536411 PDCD2LQ9BRP1 358 aa16.39■□□□□ 0.21
SCNN1A-209ENST00000536411 SENP2Q9HC62 589 aa16.39■□□□□ 0.21
SCNN1A-209ENST00000536411 PDGFCQ9NRA1 345 aa16.39■□□□□ 0.21
SCNN1A-209ENST00000536411 TMEM39AQ9NV64 488 aa16.39■□□□□ 0.21
SCNN1A-209ENST00000536411 MRVI1Q9Y6F6 885 aa16.39■□□□□ 0.21
SCNN1A-209ENST00000536411 MKI67P46013 3256 aaKnown RBP16.39■□□□□ 0.21
SCNN1A-209ENST00000536411 MYADML2A6NDP7 307 aa16.38■□□□□ 0.21
SCNN1A-209ENST00000536411 A6NJR5 290 aa16.38■□□□□ 0.21
SCNN1A-209ENST00000536411 EIF2AK2P19525 551 aaKnown RBP16.38■□□□□ 0.21
SCNN1A-209ENST00000536411 PTPN11Q06124 597 aaPredicted RBP16.38■□□□□ 0.21
SCNN1A-209ENST00000536411 LRIT3Q3SXY7 679 aa16.38■□□□□ 0.21
SCNN1A-209ENST00000536411 EMID1Q96A84 441 aaPredicted RBP16.38■□□□□ 0.21
SCNN1A-209ENST00000536411 PURBQ96QR8 312 aaKnown RBP16.38■□□□□ 0.21
SCNN1A-209ENST00000536411 MTG1Q9BT17 334 aaPredicted RBP16.38■□□□□ 0.21
SCNN1A-209ENST00000536411 MYL10Q9BUA6 226 aa16.38■□□□□ 0.21
SCNN1A-209ENST00000536411 KATNAL1Q9BW62 490 aa16.38■□□□□ 0.21
SCNN1A-209ENST00000536411 GOLGA8AA7E2F4 631 aa16.37■□□□□ 0.21
SCNN1A-209ENST00000536411 GOLGA8BA8MQT2 603 aa16.37■□□□□ 0.21
SCNN1A-209ENST00000536411 CTAGE5O15320 804 aa16.37■□□□□ 0.21
SCNN1A-209ENST00000536411 PPP1R11O60927 126 aaPredicted RBP16.37■□□□□ 0.21
SCNN1A-209ENST00000536411 CASTP20810 708 aaKnown RBP16.37■□□□□ 0.21
SCNN1A-209ENST00000536411 CDK7P50613 346 aa16.37■□□□□ 0.21
SCNN1A-209ENST00000536411 BEX3Q00994 111 aa16.37■□□□□ 0.21
SCNN1A-209ENST00000536411 ITGA7Q13683 1181 aa16.37■□□□□ 0.21
SCNN1A-209ENST00000536411 LAMC2Q13753 1193 aa16.37■□□□□ 0.21
SCNN1A-209ENST00000536411 PGM5Q15124 567 aa16.37■□□□□ 0.21
SCNN1A-209ENST00000536411 MCTP2Q6DN12 878 aa16.37■□□□□ 0.21
SCNN1A-209ENST00000536411 CXCL17Q6UXB2 119 aa16.37■□□□□ 0.21
SCNN1A-209ENST00000536411 SEPT14Q6ZU15 432 aa16.37■□□□□ 0.21
SCNN1A-209ENST00000536411 VSIG10LQ86VR7 867 aa16.37■□□□□ 0.21
SCNN1A-209ENST00000536411 SKAP1Q86WV1 359 aa16.37■□□□□ 0.21
SCNN1A-209ENST00000536411 SLC43A3Q8NBI5 491 aa16.37■□□□□ 0.21
SCNN1A-209ENST00000536411 CCDC12Q8WUD4 166 aaPredicted RBP16.37■□□□□ 0.21
SCNN1A-209ENST00000536411 CDHR1Q96JP9 859 aa16.37■□□□□ 0.21
SCNN1A-209ENST00000536411 JAKMIP1Q96N16 626 aaKnown RBP16.37■□□□□ 0.21
SCNN1A-209ENST00000536411 FRMPD4Q14CM0 1322 aa16.37■□□□□ 0.21
SCNN1A-209ENST00000536411 SPDYE3A6NKU9 549 aa16.36■□□□□ 0.21
SCNN1A-209ENST00000536411 OPLAHO14841 1288 aa16.36■□□□□ 0.21
SCNN1A-209ENST00000536411 METAP2P50579 478 aaKnown RBP eCLIP16.36■□□□□ 0.21
SCNN1A-209ENST00000536411 FXR1P51114 621 aaKnown RBP eCLIP16.36■□□□□ 0.21
SCNN1A-209ENST00000536411 MDM2Q00987 491 aaPredicted RBP16.36■□□□□ 0.21
SCNN1A-209ENST00000536411 PPIGQ13427 754 aaKnown RBP eCLIP16.36■□□□□ 0.21
SCNN1A-209ENST00000536411 DGKDQ16760 1214 aa16.36■□□□□ 0.21
SCNN1A-209ENST00000536411 NFRKBQ6P4R8 1299 aa16.36■□□□□ 0.21
SCNN1A-209ENST00000536411 CCDC62Q6P9F0 684 aa16.36■□□□□ 0.21
SCNN1A-209ENST00000536411 RASEFQ8IZ41 740 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms